Experiment: bur MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04423 and OHPLBJKB_04424 are separated by 805 nucleotides OHPLBJKB_04424 and OHPLBJKB_04425 overlap by 4 nucleotides OHPLBJKB_04425 and OHPLBJKB_04426 are separated by 46 nucleotides OHPLBJKB_04426 and OHPLBJKB_04427 are separated by 249 nucleotides OHPLBJKB_04427 and OHPLBJKB_04428 overlap by 1 nucleotides
OHPLBJKB_04423: OHPLBJKB_04423 - Plasmid-derived single-stranded DNA-binding protein, at 74,925 to 75,464
_04423
OHPLBJKB_04424: OHPLBJKB_04424 - hypothetical protein, at 76,270 to 76,461
_04424
OHPLBJKB_04425: OHPLBJKB_04425 - hypothetical protein, at 76,458 to 76,880
_04425
OHPLBJKB_04426: OHPLBJKB_04426 - Antirestriction protein KlcA, at 76,927 to 77,352
_04426
OHPLBJKB_04427: OHPLBJKB_04427 - hypothetical protein, at 77,602 to 77,766
_04427
OHPLBJKB_04428: OHPLBJKB_04428 - hypothetical protein, at 77,766 to 78,542
_04428
Position (kb) 76
77 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 75.697 kb on + strand at 76.268 kb on + strand at 76.269 kb on - strand at 76.298 kb on + strand, within OHPLBJKB_04424 at 76.298 kb on + strand, within OHPLBJKB_04424 at 76.298 kb on + strand, within OHPLBJKB_04424 at 76.299 kb on - strand, within OHPLBJKB_04424 at 76.299 kb on - strand, within OHPLBJKB_04424 at 76.299 kb on - strand, within OHPLBJKB_04424 at 76.421 kb on + strand, within OHPLBJKB_04424 at 76.455 kb on + strand at 76.489 kb on - strand at 76.564 kb on + strand, within OHPLBJKB_04425 at 76.565 kb on - strand, within OHPLBJKB_04425 at 76.702 kb on + strand, within OHPLBJKB_04425 at 76.838 kb on + strand at 76.845 kb on + strand at 76.845 kb on + strand at 76.846 kb on - strand at 76.871 kb on + strand at 76.872 kb on - strand at 76.872 kb on - strand at 76.872 kb on - strand at 76.872 kb on - strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.876 kb on + strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 76.877 kb on - strand at 77.023 kb on + strand, within OHPLBJKB_04426 at 77.023 kb on + strand, within OHPLBJKB_04426 at 77.023 kb on + strand, within OHPLBJKB_04426 at 77.023 kb on + strand, within OHPLBJKB_04426 at 77.023 kb on + strand, within OHPLBJKB_04426 at 77.024 kb on - strand, within OHPLBJKB_04426 at 77.024 kb on - strand, within OHPLBJKB_04426 at 77.024 kb on - strand, within OHPLBJKB_04426 at 77.042 kb on + strand, within OHPLBJKB_04426 at 77.168 kb on + strand, within OHPLBJKB_04426 at 77.169 kb on - strand, within OHPLBJKB_04426 at 77.247 kb on - strand, within OHPLBJKB_04426 at 77.252 kb on + strand, within OHPLBJKB_04426 at 77.252 kb on + strand, within OHPLBJKB_04426 at 77.252 kb on + strand, within OHPLBJKB_04426 at 77.252 kb on + strand, within OHPLBJKB_04426 at 77.253 kb on - strand, within OHPLBJKB_04426 at 77.253 kb on - strand, within OHPLBJKB_04426 at 77.253 kb on - strand, within OHPLBJKB_04426 at 77.253 kb on - strand, within OHPLBJKB_04426 at 77.288 kb on + strand, within OHPLBJKB_04426 at 77.289 kb on - strand, within OHPLBJKB_04426 at 77.289 kb on - strand, within OHPLBJKB_04426 at 77.289 kb on - strand, within OHPLBJKB_04426 at 77.345 kb on + strand at 77.377 kb on - strand at 77.648 kb on + strand, within OHPLBJKB_04427 at 77.648 kb on + strand, within OHPLBJKB_04427 at 77.648 kb on + strand, within OHPLBJKB_04427
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI10 remove 75,697 + -0.4 76,268 + +1.0 76,269 - -0.2 76,298 + OHPLBJKB_04424 0.15 +0.6 76,298 + OHPLBJKB_04424 0.15 +1.3 76,298 + OHPLBJKB_04424 0.15 +1.3 76,299 - OHPLBJKB_04424 0.15 -0.8 76,299 - OHPLBJKB_04424 0.15 -0.2 76,299 - OHPLBJKB_04424 0.15 -0.8 76,421 + OHPLBJKB_04424 0.79 +2.1 76,455 + -0.2 76,489 - +0.0 76,564 + OHPLBJKB_04425 0.25 +0.8 76,565 - OHPLBJKB_04425 0.25 -0.7 76,702 + OHPLBJKB_04425 0.58 -0.4 76,838 + -0.5 76,845 + +0.8 76,845 + -1.8 76,846 - +0.3 76,871 + -1.5 76,872 - -0.7 76,872 - +0.3 76,872 - -1.7 76,872 - -0.5 76,876 + +0.8 76,876 + -0.5 76,876 + -1.2 76,876 + +2.0 76,876 + -0.2 76,876 + -1.6 76,876 + +1.3 76,876 + +2.9 76,876 + +0.3 76,876 + -0.4 76,876 + +0.6 76,876 + -1.0 76,876 + -0.0 76,876 + +0.5 76,876 + -0.1 76,877 - -0.7 76,877 - +0.3 76,877 - -2.1 76,877 - -0.5 76,877 - +1.5 76,877 - +0.3 76,877 - -0.4 76,877 - -1.7 76,877 - +1.9 76,877 - +2.5 77,023 + OHPLBJKB_04426 0.23 -0.2 77,023 + OHPLBJKB_04426 0.23 -0.2 77,023 + OHPLBJKB_04426 0.23 -0.8 77,023 + OHPLBJKB_04426 0.23 -0.6 77,023 + OHPLBJKB_04426 0.23 +0.3 77,024 - OHPLBJKB_04426 0.23 +1.3 77,024 - OHPLBJKB_04426 0.23 +0.0 77,024 - OHPLBJKB_04426 0.23 +0.3 77,042 + OHPLBJKB_04426 0.27 +0.8 77,168 + OHPLBJKB_04426 0.57 -1.7 77,169 - OHPLBJKB_04426 0.57 +1.1 77,247 - OHPLBJKB_04426 0.75 -0.1 77,252 + OHPLBJKB_04426 0.76 -0.7 77,252 + OHPLBJKB_04426 0.76 -0.2 77,252 + OHPLBJKB_04426 0.76 +0.7 77,252 + OHPLBJKB_04426 0.76 +1.1 77,253 - OHPLBJKB_04426 0.77 +1.1 77,253 - OHPLBJKB_04426 0.77 -1.0 77,253 - OHPLBJKB_04426 0.77 -0.5 77,253 - OHPLBJKB_04426 0.77 -1.2 77,288 + OHPLBJKB_04426 0.85 -1.5 77,289 - OHPLBJKB_04426 0.85 -1.1 77,289 - OHPLBJKB_04426 0.85 +0.1 77,289 - OHPLBJKB_04426 0.85 -0.4 77,345 + +0.7 77,377 - -1.0 77,648 + OHPLBJKB_04427 0.28 -0.1 77,648 + OHPLBJKB_04427 0.28 +0.3 77,648 + OHPLBJKB_04427 0.28 +2.1
Or see this region's nucleotide sequence