Strain Fitness in Escherichia fergusonii Becca around EFB2_00090

Experiment: BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)
82,053	+		EFB2_00089	0.60	-0.4
82,053	+		EFB2_00089	0.60	-1.3
82,053	+		EFB2_00089	0.60	-1.1
82,053	+		EFB2_00089	0.60	-2.6
82,091	+		EFB2_00089	0.61	+0.7
82,092	-		EFB2_00089	0.61	+0.2
82,127	+		EFB2_00089	0.63	+1.2
82,128	-		EFB2_00089	0.63	+0.6
82,128	-		EFB2_00089	0.63	+0.2
82,134	-		EFB2_00089	0.63	-0.0
82,134	-		EFB2_00089	0.63	+0.1
82,145	+		EFB2_00089	0.63	-0.4
82,146	-		EFB2_00089	0.63	-1.1
82,146	-		EFB2_00089	0.63	-0.0
82,150	-		EFB2_00089	0.64	+0.7
82,150	-		EFB2_00089	0.64	-0.3
82,158	-		EFB2_00089	0.64	+1.0
82,204	+		EFB2_00089	0.66	-3.3
82,205	-		EFB2_00089	0.66	+0.6
82,205	-		EFB2_00089	0.66	-1.6
82,205	-		EFB2_00089	0.66	+2.1
82,211	+		EFB2_00089	0.66	+0.4
82,211	+		EFB2_00089	0.66	-0.4
82,211	+		EFB2_00089	0.66	-0.6
82,211	+		EFB2_00089	0.66	-2.7
82,211	+		EFB2_00089	0.66	-1.9
82,212	-		EFB2_00089	0.66	+0.0
82,225	+		EFB2_00089	0.67	-0.7
82,225	+		EFB2_00089	0.67	+1.0
82,225	+		EFB2_00089	0.67	+0.4
82,225	+		EFB2_00089	0.67	-0.6
82,225	+		EFB2_00089	0.67	+1.7
82,225	+		EFB2_00089	0.67	+0.9
82,225	+		EFB2_00089	0.67	-0.3
82,225	+		EFB2_00089	0.67	+1.2
82,225	+		EFB2_00089	0.67	+0.1
82,225	+		EFB2_00089	0.67	+0.6
82,225	+		EFB2_00089	0.67	-0.2
82,225	+		EFB2_00089	0.67	+0.6
82,225	+		EFB2_00089	0.67	+0.6
82,225	+		EFB2_00089	0.67	+2.5
82,225	+		EFB2_00089	0.67	+0.5
82,225	+		EFB2_00089	0.67	-1.0
82,225	+		EFB2_00089	0.67	-3.9
82,226	-		EFB2_00089	0.67	+0.5
82,226	-		EFB2_00089	0.67	+0.4
82,226	-		EFB2_00089	0.67	-2.4
82,226	-		EFB2_00089	0.67	+2.4
82,226	-		EFB2_00089	0.67	+0.2
82,226	-		EFB2_00089	0.67	-0.5
82,226	-		EFB2_00089	0.67	+1.0
82,226	-		EFB2_00089	0.67	-0.1
82,226	-		EFB2_00089	0.67	-1.1
82,226	-		EFB2_00089	0.67	+0.1
82,226	-		EFB2_00089	0.67	-0.1
82,226	-		EFB2_00089	0.67	-0.7
82,226	-		EFB2_00089	0.67	-2.9
82,226	-		EFB2_00089	0.67	+0.5
82,226	-		EFB2_00089	0.67	+0.9
82,226	-		EFB2_00089	0.67	-0.2
82,227	+		EFB2_00089	0.67	-1.0
82,227	+		EFB2_00089	0.67	-0.1
82,227	+		EFB2_00089	0.67	+0.8
82,227	+		EFB2_00089	0.67	+0.9
82,227	+		EFB2_00089	0.67	+0.3
82,227	+		EFB2_00089	0.67	-0.7
82,227	+		EFB2_00089	0.67	+0.2
82,227	+		EFB2_00089	0.67	+0.5
82,227	+		EFB2_00089	0.67	-3.8
82,227	+		EFB2_00089	0.67	-0.4
82,227	+		EFB2_00089	0.67	-0.5
82,227	+		EFB2_00089	0.67	-0.2
82,227	+		EFB2_00089	0.67	-0.0
82,227	+		EFB2_00089	0.67	-0.6
82,227	+		EFB2_00089	0.67	+0.4
82,227	+		EFB2_00089	0.67	+1.1
82,227	+		EFB2_00089	0.67	-1.1
82,227	+		EFB2_00089	0.67	+0.6
82,227	+		EFB2_00089	0.67	-0.2
82,227	+		EFB2_00089	0.67	-1.7
82,227	+		EFB2_00089	0.67	-0.2
82,227	+		EFB2_00089	0.67	+0.1
82,228	-		EFB2_00089	0.67	-1.1
82,228	-		EFB2_00089	0.67	+1.2
82,228	-		EFB2_00089	0.67	-1.5
82,228	-		EFB2_00089	0.67	+1.0
82,228	-		EFB2_00089	0.67	-0.8
82,228	-		EFB2_00089	0.67	-1.0
82,228	-		EFB2_00089	0.67	+0.7
82,228	-		EFB2_00089	0.67	+0.0
82,228	-		EFB2_00089	0.67	-1.7
82,228	-		EFB2_00089	0.67	-0.7
82,228	-		EFB2_00089	0.67	+0.0
82,228	-		EFB2_00089	0.67	-1.0
82,228	-		EFB2_00089	0.67	+0.1
82,228	-		EFB2_00089	0.67	-1.2
82,228	-		EFB2_00089	0.67	+1.0
82,228	-		EFB2_00089	0.67	-2.0
82,228	-		EFB2_00089	0.67	-0.3
82,228	-		EFB2_00089	0.67	-1.1
82,228	-		EFB2_00089	0.67	-0.3
82,228	-		EFB2_00089	0.67	+2.1
82,228	-		EFB2_00089	0.67	+0.1
82,228	-		EFB2_00089	0.67	-0.2
82,228	-		EFB2_00089	0.67	-0.2
82,228	-		EFB2_00089	0.67	+1.7
82,243	+		EFB2_00089	0.67	+1.1
82,243	+		EFB2_00089	0.67	-2.5
82,243	+		EFB2_00089	0.67	+2.0
82,243	+		EFB2_00089	0.67	-0.9
82,243	+		EFB2_00089	0.67	-2.2
82,243	+		EFB2_00089	0.67	+0.7
82,244	-		EFB2_00089	0.67	-1.1
82,244	-		EFB2_00089	0.67	+1.2
82,244	-		EFB2_00089	0.67	-1.3
82,244	-		EFB2_00089	0.67	+1.9
82,244	-		EFB2_00089	0.67	+0.5
82,244	-		EFB2_00089	0.67	+0.2
82,244	-		EFB2_00089	0.67	+1.0
82,247	+		EFB2_00089	0.67	-1.2
82,247	+		EFB2_00089	0.67	+0.2
82,247	+		EFB2_00089	0.67	+0.9
82,248	-		EFB2_00089	0.67	+1.0
82,248	-		EFB2_00089	0.67	+0.4
82,248	-		EFB2_00089	0.67	+2.5
82,248	-		EFB2_00089	0.67	-0.0
82,255	+		EFB2_00089	0.68	-0.8
82,255	+		EFB2_00089	0.68	+1.1
82,255	+		EFB2_00089	0.68	+0.6
82,255	+		EFB2_00089	0.68	+0.8
82,255	+		EFB2_00089	0.68	+1.2
82,255	+		EFB2_00089	0.68	+1.4
82,255	+		EFB2_00089	0.68	+0.5
82,277	+		EFB2_00089	0.69	-1.6
82,277	+		EFB2_00089	0.69	-0.3
82,277	+		EFB2_00089	0.69	-2.0
82,277	+		EFB2_00089	0.69	-0.9
82,277	+		EFB2_00089	0.69	+0.3
82,278	-		EFB2_00089	0.69	-2.0
82,278	-		EFB2_00089	0.69	-0.2
82,278	-		EFB2_00089	0.69	-1.8
82,278	-		EFB2_00089	0.69	+0.5
82,278	-		EFB2_00089	0.69	-2.0
82,278	-		EFB2_00089	0.69	+1.0
82,278	-		EFB2_00089	0.69	-1.1
82,278	-		EFB2_00089	0.69	+0.8
82,295	+		EFB2_00089	0.69	-0.2
82,296	-		EFB2_00089	0.69	-4.3
82,313	+		EFB2_00089	0.70	-0.5
82,313	+		EFB2_00089	0.70	+0.6
82,313	+		EFB2_00089	0.70	-0.3
82,314	-		EFB2_00089	0.70	+0.5
82,314	-		EFB2_00089	0.70	+0.2
82,314	-		EFB2_00089	0.70	-0.5
82,314	-		EFB2_00089	0.70	-0.8
82,314	-		EFB2_00089	0.70	+0.5
82,318	+		EFB2_00089	0.70	+1.5
82,319	-		EFB2_00089	0.70	+0.9
82,319	-		EFB2_00089	0.70	+0.3
82,325	+		EFB2_00089	0.71	+0.1
82,325	+		EFB2_00089	0.71	+2.0
82,325	+		EFB2_00089	0.71	-0.4
82,415	+		EFB2_00089	0.74	+1.0
82,415	+		EFB2_00089	0.74	-1.1
82,415	+		EFB2_00089	0.74	-0.8
82,415	+		EFB2_00089	0.74	+1.1
82,415	+		EFB2_00089	0.74	-0.9
82,415	+		EFB2_00089	0.74	+0.4
82,415	+		EFB2_00089	0.74	+1.1
82,415	+		EFB2_00089	0.74	-0.3
82,415	+		EFB2_00089	0.74	-0.7
82,416	-		EFB2_00089	0.74	+1.0
82,416	-		EFB2_00089	0.74	+1.2
82,416	-		EFB2_00089	0.74	+0.9
82,416	-		EFB2_00089	0.74	+0.6
82,416	-		EFB2_00089	0.74	+0.6
82,416	-		EFB2_00089	0.74	+2.3
82,416	-		EFB2_00089	0.74	+1.6
82,416	-		EFB2_00089	0.74	+0.3
82,416	-		EFB2_00089	0.74	+0.6
82,416	-		EFB2_00089	0.74	+1.1
82,416	-		EFB2_00089	0.74	+0.7
82,416	-		EFB2_00089	0.74	-0.0
82,416	-		EFB2_00089	0.74	+0.0
82,416	-		EFB2_00089	0.74	+1.5
82,416	-		EFB2_00089	0.74	-1.0
82,464	+		EFB2_00089	0.76	+1.2
82,464	+		EFB2_00089	0.76	-0.2
82,465	-		EFB2_00089	0.76	-0.7
82,465	-		EFB2_00089	0.76	+0.6
82,466	+		EFB2_00089	0.76	-1.1
82,466	+		EFB2_00089	0.76	-2.4
82,466	+		EFB2_00089	0.76	+0.0
82,466	+		EFB2_00089	0.76	+0.1
82,466	+		EFB2_00089	0.76	-0.1
82,466	+		EFB2_00089	0.76	+1.2
82,466	+		EFB2_00089	0.76	+0.7
82,466	+		EFB2_00089	0.76	-1.9
82,467	-		EFB2_00089	0.76	-0.3
82,467	-		EFB2_00089	0.76	-0.2
82,467	-		EFB2_00089	0.76	-0.1
82,467	-		EFB2_00089	0.76	+1.5
82,467	-		EFB2_00089	0.76	-2.5
82,467	-		EFB2_00089	0.76	-0.2
82,467	-		EFB2_00089	0.76	+0.2
82,467	-		EFB2_00089	0.76	+0.0
82,467	-		EFB2_00089	0.76	+0.3
82,467	-		EFB2_00089	0.76	-0.0
82,475	-		EFB2_00089	0.77	-1.0
82,482	+		EFB2_00089	0.77	+0.8
82,483	-		EFB2_00089	0.77	-0.2
82,497	+		EFB2_00089	0.77	+1.0
82,497	+		EFB2_00089	0.77	-3.1
82,497	+		EFB2_00089	0.77	+1.8
82,498	-		EFB2_00089	0.77	-1.6
82,498	-		EFB2_00089	0.77	+1.5
82,502	+		EFB2_00089	0.78	+0.9
82,502	+		EFB2_00089	0.78	+0.4
82,502	+		EFB2_00089	0.78	+0.5
82,502	+		EFB2_00089	0.78	+0.6
82,502	+		EFB2_00089	0.78	-1.6
82,502	+		EFB2_00089	0.78	-0.1
82,502	+		EFB2_00089	0.78	+0.3
82,502	+		EFB2_00089	0.78	-0.2
82,502	+		EFB2_00089	0.78	+0.4
82,502	+		EFB2_00089	0.78	-0.6
82,502	+		EFB2_00089	0.78	+0.4
82,502	+		EFB2_00089	0.78	+0.5
82,502	+		EFB2_00089	0.78	+0.8
82,502	+		EFB2_00089	0.78	+0.3
82,502	+		EFB2_00089	0.78	+1.3
82,502	+		EFB2_00089	0.78	-4.0
82,502	+		EFB2_00089	0.78	-1.3
82,502	+		EFB2_00089	0.78	-1.0
82,502	+		EFB2_00089	0.78	-2.8
82,502	+		EFB2_00089	0.78	-1.2
82,503	-		EFB2_00089	0.78	+0.6
82,503	-		EFB2_00089	0.78	+0.8
82,503	-		EFB2_00089	0.78	+1.0
82,503	-		EFB2_00089	0.78	+0.6
82,503	-		EFB2_00089	0.78	+1.5
82,503	-		EFB2_00089	0.78	-0.5
82,503	-		EFB2_00089	0.78	+1.4
82,503	-		EFB2_00089	0.78	+0.3
82,503	-		EFB2_00089	0.78	-2.6
82,503	-		EFB2_00089	0.78	-1.7
82,503	-		EFB2_00089	0.78	+1.0
82,503	-		EFB2_00089	0.78	+0.9
82,503	-		EFB2_00089	0.78	-1.3
82,503	-		EFB2_00089	0.78	-0.9
82,503	-		EFB2_00089	0.78	+0.7
82,503	-		EFB2_00089	0.78	-0.1
82,503	-		EFB2_00089	0.78	-2.8
82,503	-		EFB2_00089	0.78	+0.7
82,503	-		EFB2_00089	0.78	-0.2
82,524	+		EFB2_00089	0.78	-0.8
82,524	+		EFB2_00089	0.78	+0.9
82,524	+		EFB2_00089	0.78	-2.9
82,524	+		EFB2_00089	0.78	-0.6
82,524	+		EFB2_00089	0.78	-1.4
82,524	+		EFB2_00089	0.78	-1.2
82,524	+		EFB2_00089	0.78	-0.5
82,524	+		EFB2_00089	0.78	+1.3
82,524	+		EFB2_00089	0.78	+2.1
82,524	+		EFB2_00089	0.78	-0.6
82,524	+		EFB2_00089	0.78	+1.3
82,524	+		EFB2_00089	0.78	-1.1
82,524	+		EFB2_00089	0.78	-0.3
82,524	+		EFB2_00089	0.78	-0.2
82,524	+		EFB2_00089	0.78	+2.0
82,524	+		EFB2_00089	0.78	-1.4
82,525	-		EFB2_00089	0.79	-0.1
82,525	-		EFB2_00089	0.79	+0.8
82,525	-		EFB2_00089	0.79	-0.1
82,525	-		EFB2_00089	0.79	+0.8
82,525	-		EFB2_00089	0.79	+1.1
82,525	-		EFB2_00089	0.79	-1.5
82,525	-		EFB2_00089	0.79	+0.1
82,525	-		EFB2_00089	0.79	+0.7
82,525	-		EFB2_00089	0.79	-0.1
82,525	-		EFB2_00089	0.79	+0.1
82,525	-		EFB2_00089	0.79	+0.4
82,525	-		EFB2_00089	0.79	-0.2
82,525	-		EFB2_00089	0.79	+0.4
82,525	-		EFB2_00089	0.79	+0.4
82,525	-		EFB2_00089	0.79	-1.6
82,547	+		EFB2_00089	0.79	+0.3
82,553	+		EFB2_00089	0.80	-1.4
82,553	+		EFB2_00089	0.80	+0.3
82,553	+		EFB2_00089	0.80	+0.5
82,553	+		EFB2_00089	0.80	-0.2
82,553	+		EFB2_00089	0.80	+0.4
82,553	+		EFB2_00089	0.80	-0.6
82,553	+		EFB2_00089	0.80	+0.4
82,553	+		EFB2_00089	0.80	+2.0
82,553	+		EFB2_00089	0.80	+0.2
82,553	+		EFB2_00089	0.80	-1.7
82,553	+		EFB2_00089	0.80	-2.4
82,554	-		EFB2_00089	0.80	+0.1
82,554	-		EFB2_00089	0.80	+0.4
82,554	-		EFB2_00089	0.80	+0.7
82,554	-		EFB2_00089	0.80	+1.4
82,554	-		EFB2_00089	0.80	+1.2
82,554	-		EFB2_00089	0.80	+0.7
82,554	-		EFB2_00089	0.80	-0.5
82,554	-		EFB2_00089	0.80	+1.8
82,554	-		EFB2_00089	0.80	+1.2
82,554	-		EFB2_00089	0.80	+0.6
82,554	-		EFB2_00089	0.80	-3.2
82,554	-		EFB2_00089	0.80	-0.4
82,554	-		EFB2_00089	0.80	-2.3
82,554	-		EFB2_00089	0.80	+0.1
82,554	-		EFB2_00089	0.80	+0.7
82,554	-		EFB2_00089	0.80	+1.6
82,554	-		EFB2_00089	0.80	+2.3
82,559	+		EFB2_00089	0.80	+0.7
82,559	+		EFB2_00089	0.80	-0.8
82,559	+		EFB2_00089	0.80	+1.4
82,559	+		EFB2_00089	0.80	-2.8
82,559	+		EFB2_00089	0.80	+1.6
82,574	+		EFB2_00089	0.80	+2.0
82,574	+		EFB2_00089	0.80	+0.6
82,574	+		EFB2_00089	0.80	-1.6
82,575	-		EFB2_00089	0.81	-1.7
82,575	-		EFB2_00089	0.81	-0.9
82,575	-		EFB2_00089	0.81	-1.9
82,575	-		EFB2_00089	0.81	-0.2
82,575	-		EFB2_00089	0.81	-2.5
82,579	+		EFB2_00089	0.81	+0.4
82,579	+		EFB2_00089	0.81	-1.2
82,579	+		EFB2_00089	0.81	-1.2
82,579	+		EFB2_00089	0.81	-0.9
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84,246	+		EFB2_00092	0.15	-0.5
84,247	-		EFB2_00092	0.15	+0.3
84,247	-		EFB2_00092	0.15	-1.9
84,247	-		EFB2_00092	0.15	-0.3
84,247	-		EFB2_00092	0.15	-0.0
84,264	-		EFB2_00092	0.16	-0.4
84,269	+		EFB2_00092	0.16	+1.0
84,269	+		EFB2_00092	0.16	+1.0
84,269	+		EFB2_00092	0.16	-0.2
84,269	+		EFB2_00092	0.16	-2.4
84,269	+		EFB2_00092	0.16	-1.0
84,270	-		EFB2_00092	0.17	-0.4
84,270	-		EFB2_00092	0.17	-1.5
84,270	-		EFB2_00092	0.17	+0.9
84,300	+		EFB2_00092	0.19	-1.0
84,301	-		EFB2_00092	0.19	+0.3
84,304	-		EFB2_00092	0.19	-0.6
84,304	-		EFB2_00092	0.19	+0.5
84,347	+		EFB2_00092	0.23	+0.9
84,357	+		EFB2_00092	0.23	+0.1
84,357	+		EFB2_00092	0.23	+0.4
84,357	+		EFB2_00092	0.23	+0.6
84,357	+		EFB2_00092	0.23	+0.3
84,357	+		EFB2_00092	0.23	-0.9
84,357	+		EFB2_00092	0.23	+0.9
84,357	+		EFB2_00092	0.23	+0.2
84,357	+		EFB2_00092	0.23	+1.7
84,357	+		EFB2_00092	0.23	+0.6
84,357	+		EFB2_00092	0.23	+0.9
84,357	+		EFB2_00092	0.23	-1.4
84,358	-		EFB2_00092	0.23	-0.0
84,358	-		EFB2_00092	0.23	+0.2
84,358	-		EFB2_00092	0.23	-1.2
84,358	-		EFB2_00092	0.23	-1.3
84,358	-		EFB2_00092	0.23	+0.5
84,358	-		EFB2_00092	0.23	-4.1
84,358	-		EFB2_00092	0.23	-0.3
84,358	-		EFB2_00092	0.23	+0.3
84,358	-		EFB2_00092	0.23	-2.2
84,358	-		EFB2_00092	0.23	+0.3
84,366	+		EFB2_00092	0.24	-0.1
84,366	+		EFB2_00092	0.24	+1.2
84,366	+		EFB2_00092	0.24	-1.1
84,367	-		EFB2_00092	0.24	-0.5
84,367	-		EFB2_00092	0.24	-0.1
84,383	+		EFB2_00092	0.25	+0.4
84,384	-		EFB2_00092	0.26	-2.7
84,384	-		EFB2_00092	0.26	-0.7
84,384	-		EFB2_00092	0.26	-0.6
84,404	-		EFB2_00092	0.27	+0.6
84,404	-		EFB2_00092	0.27	-0.1
84,404	-		EFB2_00092	0.27	+2.4
84,404	-		EFB2_00092	0.27	+0.8
84,404	-		EFB2_00092	0.27	-0.1
84,404	-		EFB2_00092	0.27	+0.1
84,404	-		EFB2_00092	0.27	+2.0
84,433	-		EFB2_00092	0.29	+0.6
84,444	+		EFB2_00092	0.30	+1.5
84,445	-		EFB2_00092	0.30	+0.5
84,446	+		EFB2_00092	0.30	-0.3
84,446	+		EFB2_00092	0.30	+0.9
84,446	+		EFB2_00092	0.30	+0.5
84,447	-		EFB2_00092	0.30	+0.7
84,447	-		EFB2_00092	0.30	-1.7
84,447	-		EFB2_00092	0.30	+0.4
84,447	-		EFB2_00092	0.30	+0.4
84,447	-		EFB2_00092	0.30	+1.0
84,500	+		EFB2_00092	0.35	-3.2
84,500	+		EFB2_00092	0.35	-2.1
84,500	+		EFB2_00092	0.35	-2.5
84,500	+		EFB2_00092	0.35	+0.1
84,500	+		EFB2_00092	0.35	-3.0
84,500	+		EFB2_00092	0.35	+1.0
84,500	+		EFB2_00092	0.35	-3.5
84,501	-		EFB2_00092	0.35	+0.7
84,501	-		EFB2_00092	0.35	-1.0
84,501	-		EFB2_00092	0.35	-0.4
84,501	-		EFB2_00092	0.35	-0.4
84,501	-		EFB2_00092	0.35	+1.3
84,501	-		EFB2_00092	0.35	-1.7