Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03418

Experiment: D-Mannose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03416 and BACOVA_03418 are separated by 201 nucleotidesBACOVA_03418 and BACOVA_03417 overlap by 26 nucleotides BACOVA_03416: BACOVA_03416 - GroES-like protein, at 127,307 to 128,323 _03416 BACOVA_03418: BACOVA_03418 - hypothetical protein, at 128,525 to 128,638 _03418 BACOVA_03417: BACOVA_03417 - glycosyl hydrolase, family 43, at 128,613 to 130,217 _03417 Position (kb) 128 129Strain fitness (log2 ratio) -2 -1 0 1 2at 127.566 kb on - strand, within BACOVA_03416at 127.597 kb on + strand, within BACOVA_03416at 127.625 kb on - strand, within BACOVA_03416at 127.668 kb on - strand, within BACOVA_03416at 127.677 kb on + strand, within BACOVA_03416at 127.705 kb on + strand, within BACOVA_03416at 127.706 kb on - strand, within BACOVA_03416at 127.709 kb on - strand, within BACOVA_03416at 127.765 kb on - strand, within BACOVA_03416at 127.794 kb on - strand, within BACOVA_03416at 127.804 kb on + strand, within BACOVA_03416at 127.839 kb on + strand, within BACOVA_03416at 127.915 kb on - strand, within BACOVA_03416at 127.925 kb on + strand, within BACOVA_03416at 127.926 kb on - strand, within BACOVA_03416at 127.934 kb on - strand, within BACOVA_03416at 127.974 kb on + strand, within BACOVA_03416at 127.975 kb on - strand, within BACOVA_03416at 127.975 kb on - strand, within BACOVA_03416at 128.060 kb on - strand, within BACOVA_03416at 128.100 kb on + strand, within BACOVA_03416at 128.188 kb on + strand, within BACOVA_03416at 128.188 kb on + strand, within BACOVA_03416at 128.189 kb on - strand, within BACOVA_03416at 128.193 kb on - strand, within BACOVA_03416at 128.195 kb on - strand, within BACOVA_03416at 128.266 kb on + strandat 128.266 kb on + strandat 128.334 kb on + strandat 128.338 kb on - strandat 128.344 kb on - strandat 128.369 kb on - strandat 128.372 kb on + strandat 128.373 kb on - strandat 128.373 kb on - strandat 128.373 kb on - strandat 128.375 kb on + strandat 128.376 kb on - strandat 128.376 kb on - strandat 128.376 kb on - strandat 128.376 kb on - strandat 128.395 kb on - strandat 128.418 kb on - strandat 128.427 kb on + strandat 128.427 kb on + strandat 128.436 kb on + strandat 128.436 kb on + strandat 128.437 kb on - strandat 128.437 kb on - strandat 128.440 kb on + strandat 128.440 kb on + strandat 128.442 kb on + strandat 128.443 kb on - strandat 128.448 kb on + strandat 128.448 kb on + strandat 128.448 kb on + strandat 128.449 kb on - strandat 128.449 kb on - strandat 128.469 kb on + strandat 128.469 kb on + strandat 128.470 kb on - strandat 128.470 kb on - strandat 128.496 kb on - strandat 128.507 kb on + strandat 128.507 kb on + strandat 128.509 kb on + strandat 128.510 kb on - strandat 128.583 kb on + strand, within BACOVA_03418at 128.588 kb on - strand, within BACOVA_03418at 128.600 kb on + strand, within BACOVA_03418at 128.601 kb on - strand, within BACOVA_03418at 128.615 kb on - strandat 128.618 kb on + strandat 128.619 kb on - strandat 128.648 kb on - strandat 128.702 kb on + strandat 128.703 kb on - strandat 128.732 kb on + strandat 128.740 kb on + strandat 128.741 kb on - strandat 128.778 kb on - strand, within BACOVA_03417at 128.780 kb on + strand, within BACOVA_03417at 128.780 kb on + strand, within BACOVA_03417at 128.780 kb on + strand, within BACOVA_03417at 128.781 kb on - strand, within BACOVA_03417at 128.781 kb on - strand, within BACOVA_03417at 128.781 kb on - strand, within BACOVA_03417at 128.781 kb on - strand, within BACOVA_03417at 128.781 kb on - strand, within BACOVA_03417at 128.781 kb on - strand, within BACOVA_03417at 128.847 kb on + strand, within BACOVA_03417at 128.848 kb on - strand, within BACOVA_03417at 128.851 kb on + strand, within BACOVA_03417at 128.880 kb on + strand, within BACOVA_03417at 128.948 kb on + strand, within BACOVA_03417at 128.949 kb on - strand, within BACOVA_03417at 128.959 kb on + strand, within BACOVA_03417at 128.959 kb on + strand, within BACOVA_03417at 128.959 kb on + strand, within BACOVA_03417at 128.960 kb on - strand, within BACOVA_03417at 129.001 kb on - strand, within BACOVA_03417at 129.002 kb on + strand, within BACOVA_03417at 129.097 kb on - strand, within BACOVA_03417at 129.097 kb on - strand, within BACOVA_03417at 129.151 kb on + strand, within BACOVA_03417at 129.179 kb on - strand, within BACOVA_03417at 129.249 kb on + strand, within BACOVA_03417at 129.278 kb on + strand, within BACOVA_03417at 129.304 kb on + strand, within BACOVA_03417at 129.304 kb on + strand, within BACOVA_03417at 129.305 kb on - strand, within BACOVA_03417at 129.309 kb on + strand, within BACOVA_03417at 129.310 kb on - strand, within BACOVA_03417at 129.310 kb on - strand, within BACOVA_03417at 129.403 kb on + strand, within BACOVA_03417at 129.427 kb on - strand, within BACOVA_03417at 129.486 kb on - strand, within BACOVA_03417at 129.486 kb on - strand, within BACOVA_03417at 129.560 kb on + strand, within BACOVA_03417at 129.561 kb on - strand, within BACOVA_03417at 129.561 kb on - strand, within BACOVA_03417

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannose 10 mM (C)
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127,566 - BACOVA_03416 0.25 +0.6
127,597 + BACOVA_03416 0.29 -0.6
127,625 - BACOVA_03416 0.31 -1.2
127,668 - BACOVA_03416 0.35 +1.5
127,677 + BACOVA_03416 0.36 +0.3
127,705 + BACOVA_03416 0.39 -1.1
127,706 - BACOVA_03416 0.39 +0.3
127,709 - BACOVA_03416 0.40 +0.3
127,765 - BACOVA_03416 0.45 -2.6
127,794 - BACOVA_03416 0.48 +0.1
127,804 + BACOVA_03416 0.49 -1.0
127,839 + BACOVA_03416 0.52 -0.0
127,915 - BACOVA_03416 0.60 -0.2
127,925 + BACOVA_03416 0.61 -0.2
127,926 - BACOVA_03416 0.61 +0.9
127,934 - BACOVA_03416 0.62 +0.8
127,974 + BACOVA_03416 0.66 +1.9
127,975 - BACOVA_03416 0.66 -2.7
127,975 - BACOVA_03416 0.66 -0.9
128,060 - BACOVA_03416 0.74 +0.3
128,100 + BACOVA_03416 0.78 -0.1
128,188 + BACOVA_03416 0.87 -0.9
128,188 + BACOVA_03416 0.87 -0.4
128,189 - BACOVA_03416 0.87 -0.3
128,193 - BACOVA_03416 0.87 -1.3
128,195 - BACOVA_03416 0.87 +1.4
128,266 + -0.0
128,266 + +0.1
128,334 + +1.0
128,338 - -0.1
128,344 - +0.6
128,369 - +1.0
128,372 + +0.6
128,373 - +0.3
128,373 - -0.1
128,373 - +0.2
128,375 + +0.2
128,376 - +0.4
128,376 - -0.1
128,376 - +0.3
128,376 - +0.1
128,395 - +0.2
128,418 - -0.3
128,427 + +1.4
128,427 + +0.6
128,436 + -0.1
128,436 + -0.8
128,437 - -0.6
128,437 - -0.1
128,440 + +1.5
128,440 + -0.4
128,442 + +0.2
128,443 - +0.6
128,448 + -0.1
128,448 + +0.4
128,448 + +0.8
128,449 - -0.1
128,449 - -0.9
128,469 + +0.9
128,469 + -0.3
128,470 - -0.6
128,470 - -0.0
128,496 - +1.9
128,507 + +0.1
128,507 + +0.8
128,509 + +0.2
128,510 - -0.8
128,583 + BACOVA_03418 0.51 -0.6
128,588 - BACOVA_03418 0.55 -0.6
128,600 + BACOVA_03418 0.66 -0.4
128,601 - BACOVA_03418 0.67 -1.3
128,615 - -1.6
128,618 + +0.8
128,619 - -0.2
128,648 - -0.0
128,702 + +0.2
128,703 - -0.6
128,732 + -0.3
128,740 + +0.4
128,741 - +0.3
128,778 - BACOVA_03417 0.10 +0.5
128,780 + BACOVA_03417 0.10 +0.2
128,780 + BACOVA_03417 0.10 -1.2
128,780 + BACOVA_03417 0.10 +0.6
128,781 - BACOVA_03417 0.10 -0.1
128,781 - BACOVA_03417 0.10 +0.1
128,781 - BACOVA_03417 0.10 -0.1
128,781 - BACOVA_03417 0.10 -0.3
128,781 - BACOVA_03417 0.10 +0.5
128,781 - BACOVA_03417 0.10 +0.8
128,847 + BACOVA_03417 0.15 -0.4
128,848 - BACOVA_03417 0.15 -1.3
128,851 + BACOVA_03417 0.15 +0.3
128,880 + BACOVA_03417 0.17 +0.4
128,948 + BACOVA_03417 0.21 +1.4
128,949 - BACOVA_03417 0.21 -0.3
128,959 + BACOVA_03417 0.22 +0.8
128,959 + BACOVA_03417 0.22 +0.2
128,959 + BACOVA_03417 0.22 +0.9
128,960 - BACOVA_03417 0.22 -0.4
129,001 - BACOVA_03417 0.24 -0.4
129,002 + BACOVA_03417 0.24 +0.2
129,097 - BACOVA_03417 0.30 -0.2
129,097 - BACOVA_03417 0.30 -2.7
129,151 + BACOVA_03417 0.34 +1.9
129,179 - BACOVA_03417 0.35 -0.1
129,249 + BACOVA_03417 0.40 +0.5
129,278 + BACOVA_03417 0.41 -0.6
129,304 + BACOVA_03417 0.43 -0.2
129,304 + BACOVA_03417 0.43 -0.2
129,305 - BACOVA_03417 0.43 -0.6
129,309 + BACOVA_03417 0.43 +0.5
129,310 - BACOVA_03417 0.43 -0.1
129,310 - BACOVA_03417 0.43 -0.0
129,403 + BACOVA_03417 0.49 -0.4
129,427 - BACOVA_03417 0.51 +0.2
129,486 - BACOVA_03417 0.54 -0.6
129,486 - BACOVA_03417 0.54 -0.1
129,560 + BACOVA_03417 0.59 -0.3
129,561 - BACOVA_03417 0.59 +0.9
129,561 - BACOVA_03417 0.59 +0.3

Or see this region's nucleotide sequence