Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03228

Experiment: hib MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	hib MOI1
3,368,191	-				-0.0
3,368,233	-				-0.2
3,368,255	-				+0.5
3,368,255	-				+0.5
3,368,357	-				-1.4
3,368,357	-				-1.1
3,368,361	+				-1.5
3,368,362	-				+1.0
3,368,362	-				-0.9
3,368,362	-				-1.0
3,368,362	-				-1.8
3,368,362	-				-0.8
3,368,362	-				+0.8
3,368,362	-				-0.4
3,368,480	+		OHPLBJKB_03227	0.17	+0.7
3,368,480	+		OHPLBJKB_03227	0.17	-0.1
3,368,481	-		OHPLBJKB_03227	0.17	+0.6
3,368,562	+		OHPLBJKB_03227	0.27	+0.5
3,368,563	-		OHPLBJKB_03227	0.27	+0.6
3,368,563	-		OHPLBJKB_03227	0.27	-0.8
3,368,597	+		OHPLBJKB_03227	0.31	-0.9
3,368,598	-		OHPLBJKB_03227	0.31	+1.9
3,368,675	-		OHPLBJKB_03227	0.41	+1.5
3,368,675	-		OHPLBJKB_03227	0.41	+0.2
3,368,675	-		OHPLBJKB_03227	0.41	-1.0
3,368,676	+		OHPLBJKB_03227	0.41	-2.3
3,368,696	+		OHPLBJKB_03227	0.43	-0.6
3,368,696	+		OHPLBJKB_03227	0.43	+0.8
3,368,697	-		OHPLBJKB_03227	0.43	+0.9
3,368,766	+		OHPLBJKB_03227	0.52	-0.7
3,368,788	+		OHPLBJKB_03227	0.54	-1.1
3,368,789	-		OHPLBJKB_03227	0.54	+0.5
3,368,852	+		OHPLBJKB_03227	0.62	+0.1
3,368,853	-		OHPLBJKB_03227	0.62	-1.5
3,368,870	+		OHPLBJKB_03227	0.64	+0.4
3,368,884	+		OHPLBJKB_03227	0.66	-1.3
3,368,929	-		OHPLBJKB_03227	0.72	-0.7
3,368,980	+		OHPLBJKB_03227	0.78	-2.3
3,368,981	-		OHPLBJKB_03227	0.78	+1.1
3,368,981	-		OHPLBJKB_03227	0.78	+0.9
3,369,008	+		OHPLBJKB_03227	0.81	-3.1
3,369,008	+		OHPLBJKB_03227	0.81	+0.2
3,369,008	+		OHPLBJKB_03227	0.81	+0.6
3,369,053	+		OHPLBJKB_03227	0.87	+1.6
3,369,053	+		OHPLBJKB_03227	0.87	-0.1
3,369,103	-				+0.5
3,369,103	-				+0.2
3,369,137	+				-0.6
3,369,213	+				+1.5
3,369,213	+				-0.8
3,369,214	-				-1.2
3,369,216	-				-1.6
3,369,216	-				-1.1
3,369,224	-				+0.1
3,369,224	-				-0.1
3,369,245	-				+1.0
3,369,259	-				+0.8
3,369,461	-		OHPLBJKB_03228	0.15	-1.9
3,369,618	-		OHPLBJKB_03228	0.24	-0.6
3,369,633	-		OHPLBJKB_03228	0.25	+0.1
3,369,640	-		OHPLBJKB_03228	0.25	-0.7
3,369,643	-		OHPLBJKB_03228	0.26	-0.8
3,369,712	+		OHPLBJKB_03228	0.29	-1.3
3,369,713	-		OHPLBJKB_03228	0.30	-1.1
3,369,741	-		OHPLBJKB_03228	0.31	+0.1
3,369,741	-		OHPLBJKB_03228	0.31	+0.3
3,369,744	-		OHPLBJKB_03228	0.31	+0.9
3,369,744	-		OHPLBJKB_03228	0.31	-1.1
3,369,789	-		OHPLBJKB_03228	0.34	-2.7
3,369,799	+		OHPLBJKB_03228	0.34	+0.4
3,369,830	-		OHPLBJKB_03228	0.36	-1.7
3,369,830	-		OHPLBJKB_03228	0.36	+0.1
3,369,830	-		OHPLBJKB_03228	0.36	-2.0
3,369,868	+		OHPLBJKB_03228	0.38	-1.4
3,369,868	+		OHPLBJKB_03228	0.38	-0.8
3,369,868	+		OHPLBJKB_03228	0.38	+0.8
3,369,869	-		OHPLBJKB_03228	0.38	-1.5
3,369,869	-		OHPLBJKB_03228	0.38	+0.1
3,369,869	-		OHPLBJKB_03228	0.38	-0.2
3,369,892	+		OHPLBJKB_03228	0.40	-0.8
3,369,893	-		OHPLBJKB_03228	0.40	+0.2
3,369,916	+		OHPLBJKB_03228	0.41	-1.3
3,369,916	+		OHPLBJKB_03228	0.41	+1.5
3,369,935	+		OHPLBJKB_03228	0.42	+0.0
3,370,014	+		OHPLBJKB_03228	0.47	-2.5
3,370,015	-		OHPLBJKB_03228	0.47	+0.3
3,370,015	-		OHPLBJKB_03228	0.47	-0.8
3,370,073	-		OHPLBJKB_03228	0.50	+0.7
3,370,116	+		OHPLBJKB_03228	0.52	+1.8
3,370,116	+		OHPLBJKB_03228	0.52	-0.0
3,370,117	-		OHPLBJKB_03228	0.52	+0.5
3,370,117	-		OHPLBJKB_03228	0.52	+1.8
3,370,117	-		OHPLBJKB_03228	0.52	+0.6
3,370,279	+		OHPLBJKB_03228	0.61	+0.1
3,370,279	+		OHPLBJKB_03228	0.61	-0.0
3,370,294	+		OHPLBJKB_03228	0.62	+0.6
3,370,294	+		OHPLBJKB_03228	0.62	-1.3
3,370,295	-		OHPLBJKB_03228	0.62	-0.9
3,370,295	-		OHPLBJKB_03228	0.62	+1.3
3,370,353	-		OHPLBJKB_03228	0.66	+0.6
3,370,353	-		OHPLBJKB_03228	0.66	-1.0
3,370,353	-		OHPLBJKB_03228	0.66	-1.2
3,370,372	+		OHPLBJKB_03228	0.67	-2.8
3,370,372	+		OHPLBJKB_03228	0.67	+1.3
3,370,373	-		OHPLBJKB_03228	0.67	+1.0
3,370,373	-		OHPLBJKB_03228	0.67	-0.4
3,370,381	+		OHPLBJKB_03228	0.67	-1.9
3,370,382	-		OHPLBJKB_03228	0.67	-2.3
3,370,437	-		OHPLBJKB_03228	0.70	+0.0
3,370,453	+		OHPLBJKB_03228	0.71	-1.2
3,370,495	-		OHPLBJKB_03228	0.74	-1.6
3,370,517	+		OHPLBJKB_03228	0.75	+0.1
3,370,517	+		OHPLBJKB_03228	0.75	+1.7
3,370,648	+		OHPLBJKB_03228	0.82	+0.4
3,370,668	+		OHPLBJKB_03228	0.83	-2.3
3,370,669	-		OHPLBJKB_03228	0.83	-0.7
3,370,670	+		OHPLBJKB_03228	0.84	+0.4
3,370,670	+		OHPLBJKB_03228	0.84	+0.3
3,370,670	+		OHPLBJKB_03228	0.84	+0.1
3,370,670	+		OHPLBJKB_03228	0.84	-0.1
3,370,670	+		OHPLBJKB_03228	0.84	-1.5
3,370,671	-		OHPLBJKB_03228	0.84	-1.9
3,370,671	-		OHPLBJKB_03228	0.84	-0.8
3,370,671	-		OHPLBJKB_03228	0.84	-0.4
3,370,671	-		OHPLBJKB_03228	0.84	-1.1
3,370,671	-		OHPLBJKB_03228	0.84	-0.5
3,370,687	+		OHPLBJKB_03228	0.84	-1.4
3,370,731	+		OHPLBJKB_03228	0.87	+0.5
3,370,731	+		OHPLBJKB_03228	0.87	-2.0
3,370,732	-		OHPLBJKB_03228	0.87	+2.9
3,370,768	+		OHPLBJKB_03228	0.89	-1.1
3,370,768	+		OHPLBJKB_03228	0.89	-0.9
3,370,768	+		OHPLBJKB_03228	0.89	+0.4
3,370,768	+		OHPLBJKB_03228	0.89	-0.1
3,370,768	+		OHPLBJKB_03228	0.89	-0.1
3,370,769	-		OHPLBJKB_03228	0.89	+1.4
3,370,794	-				-0.9
3,370,823	-				-0.0
3,370,857	+				-1.6
3,370,858	-				-1.8
3,370,858	-				-0.1
3,370,858	-				+0.2
3,370,963	+				+0.5
3,371,005	-				+1.2
3,371,025	+				+0.2
3,371,025	+				+1.7
3,371,025	+				-2.0
3,371,090	+				-0.4
3,371,091	-				+0.4
3,371,091	-				-0.7
3,371,091	-				-0.7
3,371,099	-		OHPLBJKB_03229	0.10	-0.3
3,371,099	-		OHPLBJKB_03229	0.10	+0.1
3,371,128	+		OHPLBJKB_03229	0.15	+0.5
3,371,199	+		OHPLBJKB_03229	0.25	+1.7
3,371,213	+		OHPLBJKB_03229	0.27	-2.1
3,371,214	-		OHPLBJKB_03229	0.27	+0.1
3,371,305	-		OHPLBJKB_03229	0.40	+0.0
3,371,325	+		OHPLBJKB_03229	0.43	-1.2
3,371,326	-		OHPLBJKB_03229	0.43	-1.4
3,371,351	+		OHPLBJKB_03229	0.47	-2.0
3,371,351	+		OHPLBJKB_03229	0.47	-0.6
3,371,352	-		OHPLBJKB_03229	0.47	-0.3
3,371,352	-		OHPLBJKB_03229	0.47	-0.3
3,371,352	-		OHPLBJKB_03229	0.47	+1.6
3,371,352	-		OHPLBJKB_03229	0.47	+0.9
3,371,353	+		OHPLBJKB_03229	0.47	+0.9
3,371,353	+		OHPLBJKB_03229	0.47	-1.2
3,371,353	+		OHPLBJKB_03229	0.47	-1.5
3,371,353	+		OHPLBJKB_03229	0.47	+0.8
3,371,353	+		OHPLBJKB_03229	0.47	-1.5
3,371,353	+		OHPLBJKB_03229	0.47	+1.5
3,371,353	+		OHPLBJKB_03229	0.47	+5.0
3,371,354	-		OHPLBJKB_03229	0.47	+1.4
3,371,354	-		OHPLBJKB_03229	0.47	-1.1
3,371,354	-		OHPLBJKB_03229	0.47	+1.2
3,371,354	-		OHPLBJKB_03229	0.47	+0.3
3,371,354	-		OHPLBJKB_03229	0.47	-0.4
3,371,360	-		OHPLBJKB_03229	0.48	-1.2
3,371,382	-		OHPLBJKB_03229	0.51	-0.8
3,371,385	+		OHPLBJKB_03229	0.52	+0.7
3,371,484	+		OHPLBJKB_03229	0.66	+0.2
3,371,485	-		OHPLBJKB_03229	0.66	-1.1
3,371,545	+		OHPLBJKB_03229	0.75	-0.4
3,371,545	+		OHPLBJKB_03229	0.75	-0.1
3,371,634	+		OHPLBJKB_03229	0.87	-0.8
3,371,634	+		OHPLBJKB_03229	0.87	+0.2
3,371,635	-		OHPLBJKB_03229	0.88	-1.0
3,371,635	-		OHPLBJKB_03229	0.88	-0.3
3,371,635	-		OHPLBJKB_03229	0.88	-0.2
3,371,635	-		OHPLBJKB_03229	0.88	+1.3
3,371,635	-		OHPLBJKB_03229	0.88	-0.5
3,371,635	-		OHPLBJKB_03229	0.88	+0.2
3,371,662	+				+1.8
3,371,663	-				+1.6
3,371,720	-				-1.0
3,371,723	+				+0.7
3,371,774	+				+1.1
3,371,774	+				-1.3
3,371,779	-				+2.3
3,371,779	-				-0.7
3,371,821	+		OHPLBJKB_03230	0.12	-0.2
3,371,821	+		OHPLBJKB_03230	0.12	+1.1
3,371,847	+		OHPLBJKB_03230	0.19	-1.8
3,371,859	+		OHPLBJKB_03230	0.22	+0.9
3,371,859	+		OHPLBJKB_03230	0.22	-0.2
3,371,859	+		OHPLBJKB_03230	0.22	+1.0
3,371,859	+		OHPLBJKB_03230	0.22	+1.8
3,371,860	-		OHPLBJKB_03230	0.22	+1.9
3,371,860	-		OHPLBJKB_03230	0.22	-1.3
3,371,860	-		OHPLBJKB_03230	0.22	-0.8
3,371,902	-		OHPLBJKB_03230	0.32	+0.6
3,371,902	-		OHPLBJKB_03230	0.32	-0.6
3,371,914	+		OHPLBJKB_03230	0.35	-0.0
3,371,914	+		OHPLBJKB_03230	0.35	+1.5
3,371,955	+		OHPLBJKB_03230	0.46	-1.1
3,371,958	+		OHPLBJKB_03230	0.46	-0.2
3,371,958	+		OHPLBJKB_03230	0.46	-0.7
3,371,959	-		OHPLBJKB_03230	0.47	+1.2
3,371,959	-		OHPLBJKB_03230	0.47	+1.3