Strain Fitness in Escherichia coli ECRC102 around NIAGMN_20885

Experiment: RB68

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnrdB and yoaM overlap by 2 nucleotidesyoaM and nrdA are separated by 192 nucleotidesnrdA and yfaL are separated by 695 nucleotides NIAGMN_20870: nrdB - ribonucleotide-diphosphate reductase subunit beta, at 4,126,068 to 4,127,198 nrdB NIAGMN_20875: yoaM - Protein YoaM, at 4,127,197 to 4,127,232 yoaM NIAGMN_20885: nrdA - ribonucleoside-diphosphate reductase subunit alpha, at 4,127,425 to 4,129,710 nrdA NIAGMN_20890: yfaL - AIDA-I family autotransporter adhesin YfaL/EhaC, at 4,130,406 to 4,134,158 yfaL Position (kb) 4127 4128 4129 4130Strain fitness (log2 ratio) -1 0 1 2 3at 4127.314 kb on - strandat 4129.905 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RB68
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4,127,314 - +1.4
4,129,905 + +3.5

Or see this region's nucleotide sequence