Experiment: D-Glucose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04766 and BACOVA_04767 are separated by 26 nucleotides BACOVA_04767 and BACOVA_04768 overlap by 4 nucleotides BACOVA_04768 and BACOVA_04769 are separated by 20 nucleotides BACOVA_04769 and BACOVA_04770 are separated by 11 nucleotides
BACOVA_04766: BACOVA_04766 - hypothetical protein, at 120,867 to 121,523
_04766
BACOVA_04767: BACOVA_04767 - hypothetical protein, at 121,550 to 122,074
_04767
BACOVA_04768: BACOVA_04768 - conjugative transposon TraN protein, at 122,071 to 122,922
_04768
BACOVA_04769: BACOVA_04769 - DNA (cytosine-5-)-methyltransferase, at 122,943 to 123,746
_04769
BACOVA_04770: BACOVA_04770 - conjugative transposon TraM protein, at 123,758 to 124,933
_04770
Position (kb) 122
123 Strain fitness (log2 ratio) -2
-1
0
1 at 121.081 kb on + strand, within BACOVA_04766 at 121.081 kb on + strand, within BACOVA_04766 at 121.112 kb on + strand, within BACOVA_04766 at 121.114 kb on + strand, within BACOVA_04766 at 121.114 kb on + strand, within BACOVA_04766 at 121.186 kb on + strand, within BACOVA_04766 at 121.378 kb on + strand, within BACOVA_04766 at 121.378 kb on + strand, within BACOVA_04766 at 121.388 kb on - strand, within BACOVA_04766 at 121.418 kb on + strand, within BACOVA_04766 at 121.418 kb on + strand, within BACOVA_04766 at 121.419 kb on - strand, within BACOVA_04766 at 121.419 kb on - strand, within BACOVA_04766 at 121.446 kb on + strand, within BACOVA_04766 at 121.518 kb on + strand at 121.518 kb on + strand at 121.519 kb on - strand at 121.610 kb on + strand, within BACOVA_04767 at 121.610 kb on + strand, within BACOVA_04767 at 121.782 kb on + strand, within BACOVA_04767 at 121.837 kb on + strand, within BACOVA_04767 at 121.905 kb on + strand, within BACOVA_04767 at 121.923 kb on + strand, within BACOVA_04767 at 122.304 kb on + strand, within BACOVA_04768 at 122.420 kb on + strand, within BACOVA_04768 at 122.424 kb on + strand, within BACOVA_04768 at 122.425 kb on - strand, within BACOVA_04768 at 122.552 kb on + strand, within BACOVA_04768 at 122.616 kb on - strand, within BACOVA_04768 at 122.616 kb on - strand, within BACOVA_04768 at 122.627 kb on + strand, within BACOVA_04768 at 122.627 kb on + strand, within BACOVA_04768 at 122.628 kb on - strand, within BACOVA_04768 at 122.760 kb on + strand, within BACOVA_04768 at 122.840 kb on + strand at 122.840 kb on + strand at 122.840 kb on + strand at 122.841 kb on - strand at 122.841 kb on - strand at 122.841 kb on - strand at 122.841 kb on - strand at 122.904 kb on + strand at 122.905 kb on - strand at 122.905 kb on - strand at 122.909 kb on - strand at 123.157 kb on + strand, within BACOVA_04769 at 123.162 kb on + strand, within BACOVA_04769 at 123.193 kb on + strand, within BACOVA_04769 at 123.370 kb on + strand, within BACOVA_04769 at 123.372 kb on + strand, within BACOVA_04769 at 123.710 kb on + strand at 123.719 kb on + strand at 123.722 kb on + strand at 123.722 kb on + strand at 123.722 kb on + strand at 123.722 kb on + strand at 123.724 kb on + strand at 123.725 kb on - strand at 123.726 kb on + strand at 123.726 kb on + strand at 123.726 kb on + strand at 123.812 kb on + strand at 123.812 kb on + strand at 123.812 kb on + strand at 123.829 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 10 mM (C) remove 121,081 + BACOVA_04766 0.33 -0.7 121,081 + BACOVA_04766 0.33 +0.1 121,112 + BACOVA_04766 0.37 -1.5 121,114 + BACOVA_04766 0.38 -0.8 121,114 + BACOVA_04766 0.38 +0.1 121,186 + BACOVA_04766 0.49 +0.4 121,378 + BACOVA_04766 0.78 -0.0 121,378 + BACOVA_04766 0.78 +0.0 121,388 - BACOVA_04766 0.79 -0.7 121,418 + BACOVA_04766 0.84 +0.3 121,418 + BACOVA_04766 0.84 -0.3 121,419 - BACOVA_04766 0.84 +0.0 121,419 - BACOVA_04766 0.84 +1.2 121,446 + BACOVA_04766 0.88 +0.9 121,518 + +0.4 121,518 + -1.3 121,519 - -0.4 121,610 + BACOVA_04767 0.11 +0.7 121,610 + BACOVA_04767 0.11 -0.6 121,782 + BACOVA_04767 0.44 -0.5 121,837 + BACOVA_04767 0.55 +0.8 121,905 + BACOVA_04767 0.68 -0.4 121,923 + BACOVA_04767 0.71 -1.2 122,304 + BACOVA_04768 0.27 +1.3 122,420 + BACOVA_04768 0.41 +1.4 122,424 + BACOVA_04768 0.41 +0.7 122,425 - BACOVA_04768 0.42 +0.6 122,552 + BACOVA_04768 0.56 -0.8 122,616 - BACOVA_04768 0.64 +0.8 122,616 - BACOVA_04768 0.64 +0.0 122,627 + BACOVA_04768 0.65 -0.2 122,627 + BACOVA_04768 0.65 +1.6 122,628 - BACOVA_04768 0.65 +0.7 122,760 + BACOVA_04768 0.81 +0.2 122,840 + +0.2 122,840 + -0.3 122,840 + +0.8 122,841 - -1.2 122,841 - +0.2 122,841 - -1.8 122,841 - +0.1 122,904 + +0.1 122,905 - -1.6 122,905 - -1.3 122,909 - -1.2 123,157 + BACOVA_04769 0.27 -0.7 123,162 + BACOVA_04769 0.27 -1.1 123,193 + BACOVA_04769 0.31 -0.4 123,370 + BACOVA_04769 0.53 -0.8 123,372 + BACOVA_04769 0.53 -0.1 123,710 + +0.1 123,719 + +0.3 123,722 + +0.0 123,722 + -0.4 123,722 + +0.1 123,722 + +0.2 123,724 + -0.2 123,725 - -0.3 123,726 + -0.1 123,726 + +1.3 123,726 + -0.3 123,812 + +0.7 123,812 + +1.2 123,812 + -1.3 123,829 + -0.1
Or see this region's nucleotide sequence