Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02986

Experiment: D-Glucose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02984 and BACOVA_02985 are separated by 101 nucleotidesBACOVA_02985 and BACOVA_02986 are separated by 101 nucleotidesBACOVA_02986 and BACOVA_02987 are separated by 4 nucleotidesBACOVA_02987 and BACOVA_02988 are separated by 236 nucleotides BACOVA_02984: BACOVA_02984 - GMP synthase (glutamine-hydrolyzing) domain protein, at 63,756 to 65,063 _02984 BACOVA_02985: BACOVA_02985 - hypothetical protein, at 65,165 to 65,356 _02985 BACOVA_02986: BACOVA_02986 - site-specific recombinase, phage integrase family, at 65,458 to 66,675 _02986 BACOVA_02987: BACOVA_02987 - hypothetical protein, at 66,680 to 67,222 _02987 BACOVA_02988: BACOVA_02988 - DNA binding domain, excisionase family, at 67,459 to 67,752 _02988 Position (kb) 65 66 67Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 64.499 kb on + strand, within BACOVA_02984at 64.502 kb on + strand, within BACOVA_02984at 64.503 kb on - strand, within BACOVA_02984at 64.503 kb on - strand, within BACOVA_02984at 64.503 kb on - strand, within BACOVA_02984at 64.514 kb on + strand, within BACOVA_02984at 64.541 kb on + strand, within BACOVA_02984at 64.562 kb on + strand, within BACOVA_02984at 64.562 kb on + strand, within BACOVA_02984at 64.563 kb on - strand, within BACOVA_02984at 64.563 kb on - strand, within BACOVA_02984at 64.567 kb on + strand, within BACOVA_02984at 64.567 kb on + strand, within BACOVA_02984at 64.568 kb on - strand, within BACOVA_02984at 64.568 kb on - strand, within BACOVA_02984at 64.589 kb on - strand, within BACOVA_02984at 64.603 kb on + strand, within BACOVA_02984at 64.625 kb on + strand, within BACOVA_02984at 64.657 kb on + strand, within BACOVA_02984at 64.664 kb on - strand, within BACOVA_02984at 64.664 kb on - strand, within BACOVA_02984at 64.714 kb on + strand, within BACOVA_02984at 64.715 kb on - strand, within BACOVA_02984at 64.724 kb on - strand, within BACOVA_02984at 64.724 kb on - strand, within BACOVA_02984at 64.731 kb on - strand, within BACOVA_02984at 64.731 kb on - strand, within BACOVA_02984at 64.731 kb on - strand, within BACOVA_02984at 64.733 kb on + strand, within BACOVA_02984at 64.733 kb on + strand, within BACOVA_02984at 64.808 kb on + strand, within BACOVA_02984at 64.824 kb on + strand, within BACOVA_02984at 64.834 kb on + strand, within BACOVA_02984at 64.925 kb on + strand, within BACOVA_02984at 64.925 kb on + strand, within BACOVA_02984at 64.937 kb on + strandat 64.937 kb on + strandat 64.959 kb on - strandat 64.973 kb on - strandat 64.983 kb on - strandat 64.983 kb on - strandat 65.006 kb on - strandat 65.006 kb on - strandat 65.020 kb on - strandat 65.040 kb on - strandat 65.050 kb on + strandat 65.116 kb on + strandat 65.123 kb on - strandat 65.172 kb on + strandat 65.187 kb on + strand, within BACOVA_02985at 65.293 kb on + strand, within BACOVA_02985at 65.294 kb on - strand, within BACOVA_02985at 65.294 kb on - strand, within BACOVA_02985at 65.296 kb on - strand, within BACOVA_02985at 65.402 kb on + strandat 65.403 kb on - strandat 65.403 kb on - strandat 65.405 kb on + strandat 65.409 kb on + strandat 65.410 kb on - strandat 65.421 kb on + strandat 65.447 kb on - strandat 65.447 kb on - strandat 65.450 kb on + strandat 65.451 kb on - strandat 65.452 kb on + strandat 65.478 kb on - strandat 65.478 kb on - strandat 65.491 kb on - strandat 65.494 kb on + strandat 65.494 kb on + strandat 65.494 kb on + strandat 65.494 kb on + strandat 65.494 kb on + strandat 65.495 kb on - strandat 65.496 kb on + strandat 65.496 kb on + strandat 65.496 kb on + strandat 65.497 kb on - strandat 65.497 kb on - strandat 65.501 kb on + strandat 65.543 kb on + strandat 65.590 kb on + strand, within BACOVA_02986at 65.592 kb on + strand, within BACOVA_02986at 65.592 kb on + strand, within BACOVA_02986at 65.593 kb on - strand, within BACOVA_02986at 65.593 kb on - strand, within BACOVA_02986at 65.593 kb on - strand, within BACOVA_02986at 65.594 kb on + strand, within BACOVA_02986at 65.594 kb on + strand, within BACOVA_02986at 65.595 kb on - strand, within BACOVA_02986at 65.595 kb on - strand, within BACOVA_02986at 65.601 kb on - strand, within BACOVA_02986at 65.602 kb on + strand, within BACOVA_02986at 65.602 kb on + strand, within BACOVA_02986at 65.603 kb on - strand, within BACOVA_02986at 65.658 kb on - strand, within BACOVA_02986at 65.835 kb on + strand, within BACOVA_02986at 65.836 kb on - strand, within BACOVA_02986at 65.846 kb on - strand, within BACOVA_02986at 65.879 kb on + strand, within BACOVA_02986at 65.880 kb on - strand, within BACOVA_02986at 65.880 kb on - strand, within BACOVA_02986at 65.923 kb on + strand, within BACOVA_02986at 65.923 kb on + strand, within BACOVA_02986at 65.925 kb on + strand, within BACOVA_02986at 65.925 kb on + strand, within BACOVA_02986at 65.926 kb on - strand, within BACOVA_02986at 65.928 kb on + strand, within BACOVA_02986at 65.928 kb on + strand, within BACOVA_02986at 65.928 kb on + strand, within BACOVA_02986at 65.933 kb on - strand, within BACOVA_02986at 65.933 kb on - strand, within BACOVA_02986at 65.937 kb on + strand, within BACOVA_02986at 65.938 kb on - strand, within BACOVA_02986at 65.994 kb on + strand, within BACOVA_02986at 66.017 kb on + strand, within BACOVA_02986at 66.022 kb on + strand, within BACOVA_02986at 66.022 kb on + strand, within BACOVA_02986at 66.023 kb on - strand, within BACOVA_02986at 66.023 kb on - strand, within BACOVA_02986at 66.025 kb on + strand, within BACOVA_02986at 66.059 kb on + strand, within BACOVA_02986at 66.071 kb on + strand, within BACOVA_02986at 66.071 kb on + strand, within BACOVA_02986at 66.075 kb on - strand, within BACOVA_02986at 66.115 kb on - strand, within BACOVA_02986at 66.126 kb on - strand, within BACOVA_02986at 66.171 kb on + strand, within BACOVA_02986at 66.172 kb on - strand, within BACOVA_02986at 66.172 kb on - strand, within BACOVA_02986at 66.172 kb on - strand, within BACOVA_02986at 66.179 kb on - strand, within BACOVA_02986at 66.200 kb on + strand, within BACOVA_02986at 66.214 kb on - strand, within BACOVA_02986at 66.216 kb on - strand, within BACOVA_02986at 66.219 kb on - strand, within BACOVA_02986at 66.224 kb on + strand, within BACOVA_02986at 66.224 kb on + strand, within BACOVA_02986at 66.225 kb on - strand, within BACOVA_02986at 66.234 kb on + strand, within BACOVA_02986at 66.327 kb on + strand, within BACOVA_02986at 66.357 kb on - strand, within BACOVA_02986at 66.403 kb on + strand, within BACOVA_02986at 66.418 kb on - strand, within BACOVA_02986at 66.439 kb on - strand, within BACOVA_02986at 66.451 kb on - strand, within BACOVA_02986at 66.471 kb on + strand, within BACOVA_02986at 66.495 kb on + strand, within BACOVA_02986at 66.496 kb on - strand, within BACOVA_02986at 66.496 kb on - strand, within BACOVA_02986at 66.496 kb on - strand, within BACOVA_02986at 66.497 kb on + strand, within BACOVA_02986at 66.544 kb on - strand, within BACOVA_02986at 66.552 kb on + strand, within BACOVA_02986at 66.553 kb on - strand, within BACOVA_02986at 66.555 kb on + strandat 66.556 kb on - strandat 66.594 kb on - strandat 66.611 kb on - strandat 66.645 kb on + strandat 66.657 kb on - strandat 66.667 kb on - strandat 66.673 kb on + strandat 66.709 kb on + strandat 66.710 kb on - strandat 66.711 kb on + strandat 66.724 kb on - strandat 66.724 kb on - strandat 66.739 kb on + strand, within BACOVA_02987at 66.740 kb on - strand, within BACOVA_02987at 66.754 kb on + strand, within BACOVA_02987at 66.779 kb on - strand, within BACOVA_02987at 66.780 kb on + strand, within BACOVA_02987at 66.780 kb on + strand, within BACOVA_02987at 66.781 kb on - strand, within BACOVA_02987at 66.784 kb on + strand, within BACOVA_02987at 66.785 kb on - strand, within BACOVA_02987at 66.826 kb on + strand, within BACOVA_02987at 66.843 kb on + strand, within BACOVA_02987at 66.843 kb on + strand, within BACOVA_02987at 66.843 kb on + strand, within BACOVA_02987at 66.844 kb on - strand, within BACOVA_02987at 66.844 kb on - strand, within BACOVA_02987at 66.844 kb on - strand, within BACOVA_02987at 66.851 kb on - strand, within BACOVA_02987at 66.852 kb on + strand, within BACOVA_02987at 66.857 kb on - strand, within BACOVA_02987at 66.857 kb on - strand, within BACOVA_02987at 66.870 kb on - strand, within BACOVA_02987at 66.881 kb on - strand, within BACOVA_02987at 66.913 kb on + strand, within BACOVA_02987at 66.913 kb on + strand, within BACOVA_02987at 66.913 kb on + strand, within BACOVA_02987at 66.914 kb on - strand, within BACOVA_02987at 66.915 kb on + strand, within BACOVA_02987at 66.915 kb on + strand, within BACOVA_02987at 66.917 kb on + strand, within BACOVA_02987at 66.917 kb on + strand, within BACOVA_02987at 66.920 kb on - strand, within BACOVA_02987at 66.931 kb on + strand, within BACOVA_02987at 66.932 kb on - strand, within BACOVA_02987at 66.947 kb on - strand, within BACOVA_02987at 66.953 kb on - strand, within BACOVA_02987at 66.966 kb on + strand, within BACOVA_02987at 66.966 kb on + strand, within BACOVA_02987at 66.967 kb on - strand, within BACOVA_02987at 67.011 kb on + strand, within BACOVA_02987at 67.012 kb on - strand, within BACOVA_02987at 67.024 kb on + strand, within BACOVA_02987at 67.063 kb on + strand, within BACOVA_02987at 67.063 kb on + strand, within BACOVA_02987at 67.064 kb on - strand, within BACOVA_02987at 67.064 kb on - strand, within BACOVA_02987at 67.065 kb on + strand, within BACOVA_02987at 67.080 kb on - strand, within BACOVA_02987at 67.085 kb on - strand, within BACOVA_02987at 67.099 kb on - strand, within BACOVA_02987at 67.116 kb on - strand, within BACOVA_02987at 67.140 kb on + strand, within BACOVA_02987at 67.158 kb on + strand, within BACOVA_02987at 67.175 kb on - strandat 67.189 kb on - strandat 67.220 kb on + strandat 67.232 kb on + strandat 67.293 kb on + strandat 67.316 kb on - strandat 67.316 kb on - strandat 67.336 kb on - strandat 67.344 kb on + strandat 67.344 kb on + strandat 67.345 kb on - strandat 67.351 kb on + strandat 67.351 kb on + strandat 67.352 kb on - strandat 67.352 kb on - strandat 67.352 kb on - strandat 67.360 kb on - strandat 67.360 kb on - strandat 67.383 kb on - strandat 67.396 kb on - strandat 67.409 kb on + strandat 67.409 kb on + strandat 67.409 kb on + strandat 67.412 kb on - strandat 67.453 kb on + strandat 67.479 kb on - strandat 67.553 kb on + strand, within BACOVA_02988at 67.608 kb on - strand, within BACOVA_02988at 67.611 kb on - strand, within BACOVA_02988at 67.611 kb on - strand, within BACOVA_02988at 67.611 kb on - strand, within BACOVA_02988at 67.658 kb on + strand, within BACOVA_02988

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 10 mM (C)
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64,499 + BACOVA_02984 0.57 -0.4
64,502 + BACOVA_02984 0.57 -0.0
64,503 - BACOVA_02984 0.57 +0.0
64,503 - BACOVA_02984 0.57 +0.5
64,503 - BACOVA_02984 0.57 -0.3
64,514 + BACOVA_02984 0.58 +0.0
64,541 + BACOVA_02984 0.60 -1.5
64,562 + BACOVA_02984 0.62 -0.1
64,562 + BACOVA_02984 0.62 +0.2
64,563 - BACOVA_02984 0.62 -1.4
64,563 - BACOVA_02984 0.62 +0.2
64,567 + BACOVA_02984 0.62 +0.7
64,567 + BACOVA_02984 0.62 +0.2
64,568 - BACOVA_02984 0.62 +0.0
64,568 - BACOVA_02984 0.62 +1.0
64,589 - BACOVA_02984 0.64 +1.0
64,603 + BACOVA_02984 0.65 -0.3
64,625 + BACOVA_02984 0.66 +0.9
64,657 + BACOVA_02984 0.69 +1.3
64,664 - BACOVA_02984 0.69 +0.6
64,664 - BACOVA_02984 0.69 +0.5
64,714 + BACOVA_02984 0.73 -0.2
64,715 - BACOVA_02984 0.73 +0.5
64,724 - BACOVA_02984 0.74 +1.2
64,724 - BACOVA_02984 0.74 -0.2
64,731 - BACOVA_02984 0.75 -1.1
64,731 - BACOVA_02984 0.75 -1.0
64,731 - BACOVA_02984 0.75 +0.8
64,733 + BACOVA_02984 0.75 -0.6
64,733 + BACOVA_02984 0.75 +0.3
64,808 + BACOVA_02984 0.80 -0.8
64,824 + BACOVA_02984 0.82 -0.5
64,834 + BACOVA_02984 0.82 +0.4
64,925 + BACOVA_02984 0.89 +0.3
64,925 + BACOVA_02984 0.89 -1.0
64,937 + -0.1
64,937 + -0.8
64,959 - -0.8
64,973 - -0.0
64,983 - -0.0
64,983 - -0.0
65,006 - +0.5
65,006 - +0.8
65,020 - +0.1
65,040 - +0.3
65,050 + +0.3
65,116 + +0.3
65,123 - -1.1
65,172 + -0.7
65,187 + BACOVA_02985 0.11 +0.0
65,293 + BACOVA_02985 0.67 +0.5
65,294 - BACOVA_02985 0.67 +0.2
65,294 - BACOVA_02985 0.67 -1.8
65,296 - BACOVA_02985 0.68 -1.1
65,402 + -0.1
65,403 - +0.1
65,403 - +1.1
65,405 + -0.7
65,409 + +0.8
65,410 - +0.5
65,421 + -1.9
65,447 - -1.4
65,447 - +0.3
65,450 + -0.4
65,451 - -0.3
65,452 + -0.1
65,478 - -0.3
65,478 - -1.0
65,491 - +0.5
65,494 + -1.3
65,494 + +0.5
65,494 + -1.3
65,494 + -1.8
65,494 + +0.7
65,495 - -1.2
65,496 + +2.0
65,496 + +0.9
65,496 + +0.3
65,497 - -0.3
65,497 - -1.4
65,501 + -3.8
65,543 + -1.0
65,590 + BACOVA_02986 0.11 +0.1
65,592 + BACOVA_02986 0.11 +0.1
65,592 + BACOVA_02986 0.11 -0.5
65,593 - BACOVA_02986 0.11 +0.4
65,593 - BACOVA_02986 0.11 -0.2
65,593 - BACOVA_02986 0.11 +1.5
65,594 + BACOVA_02986 0.11 -1.1
65,594 + BACOVA_02986 0.11 -0.5
65,595 - BACOVA_02986 0.11 +0.2
65,595 - BACOVA_02986 0.11 +0.1
65,601 - BACOVA_02986 0.12 -0.8
65,602 + BACOVA_02986 0.12 +1.0
65,602 + BACOVA_02986 0.12 +0.5
65,603 - BACOVA_02986 0.12 +1.3
65,658 - BACOVA_02986 0.16 -0.7
65,835 + BACOVA_02986 0.31 +1.5
65,836 - BACOVA_02986 0.31 +0.7
65,846 - BACOVA_02986 0.32 -0.1
65,879 + BACOVA_02986 0.35 -0.8
65,880 - BACOVA_02986 0.35 -1.4
65,880 - BACOVA_02986 0.35 +1.4
65,923 + BACOVA_02986 0.38 +0.3
65,923 + BACOVA_02986 0.38 -0.4
65,925 + BACOVA_02986 0.38 -0.4
65,925 + BACOVA_02986 0.38 -0.4
65,926 - BACOVA_02986 0.38 -0.2
65,928 + BACOVA_02986 0.39 -1.2
65,928 + BACOVA_02986 0.39 +1.0
65,928 + BACOVA_02986 0.39 +2.0
65,933 - BACOVA_02986 0.39 +0.2
65,933 - BACOVA_02986 0.39 +1.0
65,937 + BACOVA_02986 0.39 +1.1
65,938 - BACOVA_02986 0.39 +0.1
65,994 + BACOVA_02986 0.44 +1.0
66,017 + BACOVA_02986 0.46 +0.1
66,022 + BACOVA_02986 0.46 +0.5
66,022 + BACOVA_02986 0.46 -0.7
66,023 - BACOVA_02986 0.46 +0.5
66,023 - BACOVA_02986 0.46 -0.7
66,025 + BACOVA_02986 0.47 +1.2
66,059 + BACOVA_02986 0.49 +0.7
66,071 + BACOVA_02986 0.50 -1.9
66,071 + BACOVA_02986 0.50 +0.4
66,075 - BACOVA_02986 0.51 -0.0
66,115 - BACOVA_02986 0.54 -0.3
66,126 - BACOVA_02986 0.55 +0.4
66,171 + BACOVA_02986 0.59 -1.3
66,172 - BACOVA_02986 0.59 +0.6
66,172 - BACOVA_02986 0.59 -0.2
66,172 - BACOVA_02986 0.59 -0.1
66,179 - BACOVA_02986 0.59 +0.5
66,200 + BACOVA_02986 0.61 +0.0
66,214 - BACOVA_02986 0.62 +0.2
66,216 - BACOVA_02986 0.62 +0.7
66,219 - BACOVA_02986 0.62 +0.4
66,224 + BACOVA_02986 0.63 +0.3
66,224 + BACOVA_02986 0.63 +0.0
66,225 - BACOVA_02986 0.63 +1.0
66,234 + BACOVA_02986 0.64 +0.6
66,327 + BACOVA_02986 0.71 -0.6
66,357 - BACOVA_02986 0.74 -0.3
66,403 + BACOVA_02986 0.78 -0.6
66,418 - BACOVA_02986 0.79 -0.0
66,439 - BACOVA_02986 0.81 +0.4
66,451 - BACOVA_02986 0.82 -2.1
66,471 + BACOVA_02986 0.83 -0.7
66,495 + BACOVA_02986 0.85 +0.5
66,496 - BACOVA_02986 0.85 +0.1
66,496 - BACOVA_02986 0.85 +0.5
66,496 - BACOVA_02986 0.85 +0.2
66,497 + BACOVA_02986 0.85 +1.1
66,544 - BACOVA_02986 0.89 +0.5
66,552 + BACOVA_02986 0.90 +0.8
66,553 - BACOVA_02986 0.90 +0.3
66,555 + +0.3
66,556 - -0.0
66,594 - -0.2
66,611 - -0.2
66,645 + -0.4
66,657 - -1.4
66,667 - -0.7
66,673 + -1.1
66,709 + +1.4
66,710 - +0.8
66,711 + +0.1
66,724 - +1.2
66,724 - +0.2
66,739 + BACOVA_02987 0.11 +0.2
66,740 - BACOVA_02987 0.11 +0.7
66,754 + BACOVA_02987 0.14 -1.8
66,779 - BACOVA_02987 0.18 +0.2
66,780 + BACOVA_02987 0.18 +0.2
66,780 + BACOVA_02987 0.18 -0.8
66,781 - BACOVA_02987 0.19 -1.0
66,784 + BACOVA_02987 0.19 +0.2
66,785 - BACOVA_02987 0.19 +0.6
66,826 + BACOVA_02987 0.27 +1.0
66,843 + BACOVA_02987 0.30 +0.9
66,843 + BACOVA_02987 0.30 +1.7
66,843 + BACOVA_02987 0.30 -0.5
66,844 - BACOVA_02987 0.30 -0.6
66,844 - BACOVA_02987 0.30 +0.2
66,844 - BACOVA_02987 0.30 -0.5
66,851 - BACOVA_02987 0.31 +0.8
66,852 + BACOVA_02987 0.32 +0.2
66,857 - BACOVA_02987 0.33 +0.2
66,857 - BACOVA_02987 0.33 -0.1
66,870 - BACOVA_02987 0.35 +0.5
66,881 - BACOVA_02987 0.37 +0.1
66,913 + BACOVA_02987 0.43 -0.6
66,913 + BACOVA_02987 0.43 +0.6
66,913 + BACOVA_02987 0.43 -1.2
66,914 - BACOVA_02987 0.43 -0.8
66,915 + BACOVA_02987 0.43 -0.1
66,915 + BACOVA_02987 0.43 +0.3
66,917 + BACOVA_02987 0.44 +0.4
66,917 + BACOVA_02987 0.44 +1.0
66,920 - BACOVA_02987 0.44 -0.7
66,931 + BACOVA_02987 0.46 -0.8
66,932 - BACOVA_02987 0.46 -0.8
66,947 - BACOVA_02987 0.49 -0.4
66,953 - BACOVA_02987 0.50 -0.9
66,966 + BACOVA_02987 0.53 -1.2
66,966 + BACOVA_02987 0.53 -0.4
66,967 - BACOVA_02987 0.53 -1.3
67,011 + BACOVA_02987 0.61 -1.5
67,012 - BACOVA_02987 0.61 -1.6
67,024 + BACOVA_02987 0.63 +0.3
67,063 + BACOVA_02987 0.71 -0.3
67,063 + BACOVA_02987 0.71 -0.8
67,064 - BACOVA_02987 0.71 +1.3
67,064 - BACOVA_02987 0.71 +0.5
67,065 + BACOVA_02987 0.71 -0.7
67,080 - BACOVA_02987 0.74 +0.1
67,085 - BACOVA_02987 0.75 -0.3
67,099 - BACOVA_02987 0.77 +0.2
67,116 - BACOVA_02987 0.80 +0.2
67,140 + BACOVA_02987 0.85 -1.3
67,158 + BACOVA_02987 0.88 -0.7
67,175 - -0.7
67,189 - +0.1
67,220 + +1.8
67,232 + +0.0
67,293 + +0.9
67,316 - +0.3
67,316 - -0.2
67,336 - -0.1
67,344 + -0.7
67,344 + -1.4
67,345 - +1.5
67,351 + -1.0
67,351 + -0.8
67,352 - +0.1
67,352 - -0.3
67,352 - -0.8
67,360 - -0.4
67,360 - -0.3
67,383 - -1.1
67,396 - -0.8
67,409 + -0.1
67,409 + -0.3
67,409 + -1.0
67,412 - +0.1
67,453 + -1.5
67,479 - +0.8
67,553 + BACOVA_02988 0.32 -0.1
67,608 - BACOVA_02988 0.51 +0.7
67,611 - BACOVA_02988 0.52 -0.6
67,611 - BACOVA_02988 0.52 +0.3
67,611 - BACOVA_02988 0.52 +0.0
67,658 + BACOVA_02988 0.68 -2.0

Or see this region's nucleotide sequence