Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03599

Experiment: hib MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	hib MOI10
3,776,433	+		OHPLBJKB_03598	0.69	-2.3
3,776,437	+		OHPLBJKB_03598	0.69	+0.1
3,776,437	+		OHPLBJKB_03598	0.69	-0.6
3,776,438	-		OHPLBJKB_03598	0.69	-0.5
3,776,579	+		OHPLBJKB_03598	0.75	-1.1
3,776,580	-		OHPLBJKB_03598	0.75	-1.2
3,776,590	+		OHPLBJKB_03598	0.76	+0.6
3,776,591	-		OHPLBJKB_03598	0.76	-0.0
3,776,617	-		OHPLBJKB_03598	0.77	-0.8
3,776,767	+		OHPLBJKB_03598	0.83	+0.4
3,776,767	+		OHPLBJKB_03598	0.83	+1.0
3,776,767	+		OHPLBJKB_03598	0.83	+0.6
3,776,775	+		OHPLBJKB_03598	0.84	-1.6
3,776,775	+		OHPLBJKB_03598	0.84	-1.3
3,776,795	-		OHPLBJKB_03598	0.84	-1.0
3,776,918	+		OHPLBJKB_03598	0.90	-0.5
3,776,919	-		OHPLBJKB_03598	0.90	-1.8
3,776,995	-				+0.7
3,776,998	+				-0.9
3,776,998	+				-0.4
3,776,999	-				-0.4
3,776,999	-				-2.0
3,776,999	-				+0.5
3,776,999	-				+0.3
3,777,002	+				-0.0
3,777,002	+				+0.4
3,777,002	+				+1.3
3,777,003	-				-0.3
3,777,064	+				-0.5
3,777,064	+				+1.5
3,777,080	+				+1.1
3,777,080	+				+0.8
3,777,081	-				+0.6
3,777,101	+				-1.5
3,777,101	+				+0.1
3,777,102	-				-0.6
3,777,102	-				-1.3
3,777,102	-				-0.5
3,777,102	-				-1.2
3,777,135	+				+0.9
3,777,135	+				-1.0
3,777,135	+				+0.2
3,777,136	-				+0.3
3,777,136	-				-0.6
3,777,136	-				-1.1
3,777,136	-				-0.3
3,777,222	+				+1.4
3,777,228	-				+1.6
3,777,265	-				+1.4
3,777,271	+				+0.4
3,777,271	+				+0.7
3,777,272	-				+1.5
3,777,304	+				-0.7
3,777,310	+				+1.4
3,777,311	-				+0.8
3,777,312	+				-0.2
3,777,312	+				+1.4
3,777,312	+				+0.7
3,777,313	-				+1.1
3,777,313	-				+1.4
3,777,313	-				+1.5
3,777,313	-				+2.4
3,777,326	+				+1.0
3,777,326	+				+1.1
3,777,326	+				+1.2
3,777,326	+				+1.7
3,777,327	-				+1.9
3,777,327	-				+0.2
3,777,327	-				+1.3
3,777,327	-				+1.7
3,777,327	-				+1.4
3,777,327	-				+1.4
3,777,336	-				+2.1
3,777,363	-				+1.2
3,777,421	+				+0.7
3,777,422	-				+2.1
3,777,422	-				+1.9
3,777,434	+				+1.7
3,777,434	+				+1.9
3,777,435	-				+1.2
3,777,435	-				+1.3
3,777,435	-				+2.1
3,777,435	-				+0.5
3,777,454	-				+2.1
3,777,504	-				+2.1
3,777,504	-				+2.5
3,777,504	-				+0.9
3,777,504	-				+2.1
3,777,506	+				+1.0
3,777,506	+				+1.9
3,777,509	+				+2.0
3,777,509	+				+1.3
3,777,510	-				+2.6
3,777,510	-				+2.3
3,777,573	+				+1.6
3,777,573	+				+2.4
3,777,573	+				+1.3
3,777,574	-				+0.4
3,777,574	-				+1.1
3,777,636	-		OHPLBJKB_03599	0.11	+1.2
3,777,636	-		OHPLBJKB_03599	0.11	-0.3
3,777,692	+		OHPLBJKB_03599	0.13	+2.7
3,777,725	+		OHPLBJKB_03599	0.14	+1.7
3,777,725	+		OHPLBJKB_03599	0.14	+2.1
3,777,725	+		OHPLBJKB_03599	0.14	+1.9
3,777,726	-		OHPLBJKB_03599	0.14	+1.3
3,777,937	+		OHPLBJKB_03599	0.21	+2.2
3,777,937	+		OHPLBJKB_03599	0.21	+1.7
3,777,937	+		OHPLBJKB_03599	0.21	+2.3
3,777,937	+		OHPLBJKB_03599	0.21	+0.7
3,777,938	-		OHPLBJKB_03599	0.21	+2.9
3,777,941	+		OHPLBJKB_03599	0.21	+1.5
3,777,958	+		OHPLBJKB_03599	0.22	+1.2
3,777,958	+		OHPLBJKB_03599	0.22	+0.6
3,777,959	-		OHPLBJKB_03599	0.22	+1.3
3,778,053	+		OHPLBJKB_03599	0.25	+1.2
3,778,053	+		OHPLBJKB_03599	0.25	+2.2
3,778,053	+		OHPLBJKB_03599	0.25	+1.0
3,778,053	+		OHPLBJKB_03599	0.25	+2.3
3,778,053	+		OHPLBJKB_03599	0.25	+2.3
3,778,053	+		OHPLBJKB_03599	0.25	+1.7
3,778,053	+		OHPLBJKB_03599	0.25	+2.1
3,778,054	-		OHPLBJKB_03599	0.25	+1.5
3,778,054	-		OHPLBJKB_03599	0.25	+0.7
3,778,054	-		OHPLBJKB_03599	0.25	+2.3
3,778,054	-		OHPLBJKB_03599	0.25	+1.2
3,778,109	+		OHPLBJKB_03599	0.27	+2.0
3,778,670	+		OHPLBJKB_03599	0.46	+1.5
3,778,670	+		OHPLBJKB_03599	0.46	+1.0
3,778,698	-		OHPLBJKB_03599	0.47	+1.5
3,778,910	+		OHPLBJKB_03599	0.54	+1.8
3,778,937	+		OHPLBJKB_03599	0.55	+1.8
3,778,937	+		OHPLBJKB_03599	0.55	+1.6
3,778,937	+		OHPLBJKB_03599	0.55	+2.2
3,778,937	+		OHPLBJKB_03599	0.55	+1.4
3,778,938	-		OHPLBJKB_03599	0.55	+1.2
3,778,938	-		OHPLBJKB_03599	0.55	+1.0
3,778,938	-		OHPLBJKB_03599	0.55	+0.3
3,778,938	-		OHPLBJKB_03599	0.55	+2.0
3,778,938	-		OHPLBJKB_03599	0.55	+2.4
3,778,938	-		OHPLBJKB_03599	0.55	+2.4
3,778,938	-		OHPLBJKB_03599	0.55	+1.5
3,779,002	+		OHPLBJKB_03599	0.58	+1.0
3,779,003	-		OHPLBJKB_03599	0.58	+0.9
3,779,036	+		OHPLBJKB_03599	0.59	+1.8
3,779,036	+		OHPLBJKB_03599	0.59	+2.8
3,779,036	+		OHPLBJKB_03599	0.59	+2.7
3,779,037	-		OHPLBJKB_03599	0.59	+1.3
3,779,037	-		OHPLBJKB_03599	0.59	+1.7
3,779,037	-		OHPLBJKB_03599	0.59	+1.9
3,779,037	-		OHPLBJKB_03599	0.59	+0.3
3,779,093	-		OHPLBJKB_03599	0.61	+1.5
3,779,093	-		OHPLBJKB_03599	0.61	+1.9
3,779,106	-		OHPLBJKB_03599	0.61	+1.4
3,779,123	+		OHPLBJKB_03599	0.62	+1.5
3,779,160	+		OHPLBJKB_03599	0.63	+0.4
3,779,249	+		OHPLBJKB_03599	0.66	+0.6
3,779,250	-		OHPLBJKB_03599	0.66	+1.3
3,779,254	-		OHPLBJKB_03599	0.66	+1.5
3,779,254	-		OHPLBJKB_03599	0.66	+1.6
3,779,263	+		OHPLBJKB_03599	0.67	+0.7
3,779,263	+		OHPLBJKB_03599	0.67	+0.7
3,779,263	+		OHPLBJKB_03599	0.67	+2.5
3,779,264	-		OHPLBJKB_03599	0.67	+1.7
3,779,264	-		OHPLBJKB_03599	0.67	+1.9
3,779,264	-		OHPLBJKB_03599	0.67	+1.5
3,779,264	-		OHPLBJKB_03599	0.67	+0.9
3,779,265	+		OHPLBJKB_03599	0.67	+1.3
3,779,265	+		OHPLBJKB_03599	0.67	+1.5
3,779,265	+		OHPLBJKB_03599	0.67	+1.4
3,779,265	+		OHPLBJKB_03599	0.67	+2.1
3,779,265	+		OHPLBJKB_03599	0.67	+1.5
3,779,266	-		OHPLBJKB_03599	0.67	+2.2
3,779,266	-		OHPLBJKB_03599	0.67	+2.0
3,779,266	-		OHPLBJKB_03599	0.67	+1.4
3,779,266	-		OHPLBJKB_03599	0.67	+1.5
3,779,266	-		OHPLBJKB_03599	0.67	+2.1
3,779,266	-		OHPLBJKB_03599	0.67	+0.7
3,779,279	+		OHPLBJKB_03599	0.67	+1.2
3,779,280	-		OHPLBJKB_03599	0.67	+1.0
3,779,283	+		OHPLBJKB_03599	0.67	+1.1
3,779,283	+		OHPLBJKB_03599	0.67	-0.2
3,779,283	+		OHPLBJKB_03599	0.67	+2.0
3,779,283	+		OHPLBJKB_03599	0.67	+0.0
3,779,283	+		OHPLBJKB_03599	0.67	+0.6
3,779,284	-		OHPLBJKB_03599	0.67	+2.1
3,779,284	-		OHPLBJKB_03599	0.67	+0.1
3,779,284	-		OHPLBJKB_03599	0.67	+0.0
3,779,561	+		OHPLBJKB_03599	0.77	+2.9
3,779,561	+		OHPLBJKB_03599	0.77	+0.5
3,779,561	+		OHPLBJKB_03599	0.77	+2.4
3,779,562	-		OHPLBJKB_03599	0.77	+0.8
3,779,562	-		OHPLBJKB_03599	0.77	+1.5
3,779,562	-		OHPLBJKB_03599	0.77	+1.5
3,779,654	+		OHPLBJKB_03599	0.80	+1.6
3,779,655	-		OHPLBJKB_03599	0.80	+2.0
3,779,655	-		OHPLBJKB_03599	0.80	+2.0
3,779,655	-		OHPLBJKB_03599	0.80	+1.0
3,779,658	-		OHPLBJKB_03599	0.80	+2.2
3,779,784	+		OHPLBJKB_03599	0.85	+2.1
3,779,784	+		OHPLBJKB_03599	0.85	+2.1
3,779,785	-		OHPLBJKB_03599	0.85	+2.0
3,779,852	+		OHPLBJKB_03599	0.87	+1.7
3,779,852	+		OHPLBJKB_03599	0.87	+1.1
3,779,852	+		OHPLBJKB_03599	0.87	+0.3
3,779,852	+		OHPLBJKB_03599	0.87	+2.5
3,779,852	+		OHPLBJKB_03599	0.87	+1.7
3,779,852	+		OHPLBJKB_03599	0.87	+1.9
3,779,852	+		OHPLBJKB_03599	0.87	+2.8
3,779,853	-		OHPLBJKB_03599	0.87	+1.6
3,779,853	-		OHPLBJKB_03599	0.87	+2.9
3,779,853	-		OHPLBJKB_03599	0.87	+1.5
3,779,853	-		OHPLBJKB_03599	0.87	+1.4
3,779,853	-		OHPLBJKB_03599	0.87	+1.4
3,779,853	-		OHPLBJKB_03599	0.87	-1.7
3,779,985	-				+0.3
3,780,164	-				+1.7
3,780,164	-				+1.0
3,780,220	+				+0.4
3,780,260	+				+0.3
3,780,310	+				-1.9
3,780,310	+				+0.1
3,780,311	-		OHPLBJKB_03600	0.10	-1.4
3,780,311	-		OHPLBJKB_03600	0.10	-0.3
3,780,311	-		OHPLBJKB_03600	0.10	-0.8
3,780,313	+		OHPLBJKB_03600	0.10	-1.4
3,780,313	+		OHPLBJKB_03600	0.10	-1.3
3,780,313	+		OHPLBJKB_03600	0.10	+0.8
3,780,313	+		OHPLBJKB_03600	0.10	-0.3
3,780,314	-		OHPLBJKB_03600	0.10	+0.8
3,780,314	-		OHPLBJKB_03600	0.10	-0.6
3,780,314	-		OHPLBJKB_03600	0.10	+0.5
3,780,530	+		OHPLBJKB_03600	0.43	+0.1
3,780,530	+		OHPLBJKB_03600	0.43	-1.2
3,780,531	-		OHPLBJKB_03600	0.43	+1.4
3,780,674	+		OHPLBJKB_03600	0.65	+0.8
3,780,675	-		OHPLBJKB_03600	0.65	+0.0
3,780,706	-		OHPLBJKB_03600	0.70	+0.8
3,780,745	+		OHPLBJKB_03600	0.76	-2.0
3,780,745	+		OHPLBJKB_03600	0.76	-0.4
3,780,746	-		OHPLBJKB_03600	0.76	-0.9
3,780,785	+		OHPLBJKB_03600	0.82	-0.0
3,780,785	+		OHPLBJKB_03600	0.82	+0.8
3,780,786	-		OHPLBJKB_03600	0.82	+1.4
3,780,828	+		OHPLBJKB_03600	0.88	+0.8
3,780,828	+		OHPLBJKB_03600	0.88	-1.0
3,780,828	+		OHPLBJKB_03600	0.88	+1.1
3,780,829	-		OHPLBJKB_03600	0.88	+2.3
3,780,829	-		OHPLBJKB_03600	0.88	-3.3
3,780,829	-		OHPLBJKB_03600	0.88	+1.0
3,780,829	-		OHPLBJKB_03600	0.88	-0.3
3,780,851	-				+0.6
3,780,851	-				-1.2
3,780,871	+				+1.5
3,780,871	+				-2.1
3,780,872	-				-0.5
3,780,872	-				-0.5
3,780,874	+				+0.4
3,780,874	+				+0.4
3,780,874	+				-0.7
3,780,875	-				-0.8
3,780,875	-				-0.3
3,780,999	+				+0.4
3,780,999	+				-1.0
3,781,016	-				+0.2
3,781,016	-				+1.4
3,781,023	-				-0.7
3,781,023	-				-1.0
3,781,046	-				-0.0
3,781,055	+				-1.6
3,781,055	+				-1.2
3,781,055	+				-2.3
3,781,055	+				-0.7
3,781,056	-				+0.4
3,781,159	-		OHPLBJKB_03601	0.16	+1.0
3,781,215	+		OHPLBJKB_03601	0.23	+0.2
3,781,216	-		OHPLBJKB_03601	0.23	+0.2
3,781,216	-		OHPLBJKB_03601	0.23	-1.1
3,781,216	-		OHPLBJKB_03601	0.23	-0.1
3,781,216	-		OHPLBJKB_03601	0.23	+0.2
3,781,216	-		OHPLBJKB_03601	0.23	+1.1