Experiment: RCM 1 x (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05198 and BACOVA_05199 are separated by 43 nucleotides BACOVA_05199 and BACOVA_05200 are separated by 3 nucleotides
BACOVA_05198: BACOVA_05198 - tetratricopeptide repeat protein, at 697,472 to 698,797
_05198
BACOVA_05199: BACOVA_05199 - hypothetical protein, at 698,841 to 699,455
_05199
BACOVA_05200: BACOVA_05200 - CBS domain protein, at 699,459 to 700,715
_05200
Position (kb) 698
699
700 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 699.468 kb on + strand at 699.468 kb on + strand at 699.471 kb on - strand at 699.471 kb on - strand at 699.579 kb on - strand at 699.597 kb on - strand, within BACOVA_05200 at 699.629 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.667 kb on - strand, within BACOVA_05200 at 699.671 kb on + strand, within BACOVA_05200 at 699.671 kb on + strand, within BACOVA_05200 at 699.672 kb on - strand, within BACOVA_05200 at 699.723 kb on - strand, within BACOVA_05200 at 699.768 kb on - strand, within BACOVA_05200 at 699.770 kb on + strand, within BACOVA_05200 at 699.770 kb on + strand, within BACOVA_05200 at 699.864 kb on + strand, within BACOVA_05200 at 699.865 kb on - strand, within BACOVA_05200 at 699.874 kb on + strand, within BACOVA_05200 at 699.877 kb on - strand, within BACOVA_05200 at 699.881 kb on + strand, within BACOVA_05200 at 699.941 kb on + strand, within BACOVA_05200 at 700.197 kb on + strand, within BACOVA_05200 at 700.198 kb on - strand, within BACOVA_05200 at 700.227 kb on + strand, within BACOVA_05200 at 700.230 kb on - strand, within BACOVA_05200 at 700.320 kb on - strand, within BACOVA_05200 at 700.337 kb on + strand, within BACOVA_05200 at 700.338 kb on - strand, within BACOVA_05200 at 700.386 kb on - strand, within BACOVA_05200 at 700.399 kb on + strand, within BACOVA_05200 at 700.426 kb on + strand, within BACOVA_05200 at 700.436 kb on + strand, within BACOVA_05200
Per-strain Table
Position Strand Gene LocusTag Fraction RCM 1 x (C) complex media remove 699,468 + +0.9 699,468 + -0.5 699,471 - -1.3 699,471 - -0.6 699,579 - -0.3 699,597 - BACOVA_05200 0.11 +1.0 699,629 + BACOVA_05200 0.14 -0.6 699,666 + BACOVA_05200 0.16 -0.4 699,666 + BACOVA_05200 0.16 -0.1 699,666 + BACOVA_05200 0.16 -2.8 699,666 + BACOVA_05200 0.16 +0.6 699,667 - BACOVA_05200 0.17 -1.3 699,671 + BACOVA_05200 0.17 +0.4 699,671 + BACOVA_05200 0.17 -0.1 699,672 - BACOVA_05200 0.17 -0.6 699,723 - BACOVA_05200 0.21 +1.5 699,768 - BACOVA_05200 0.25 -1.7 699,770 + BACOVA_05200 0.25 -0.1 699,770 + BACOVA_05200 0.25 -0.8 699,864 + BACOVA_05200 0.32 +0.9 699,865 - BACOVA_05200 0.32 -1.1 699,874 + BACOVA_05200 0.33 -0.6 699,877 - BACOVA_05200 0.33 +0.8 699,881 + BACOVA_05200 0.34 -1.4 699,941 + BACOVA_05200 0.38 -0.6 700,197 + BACOVA_05200 0.59 +0.3 700,198 - BACOVA_05200 0.59 -0.8 700,227 + BACOVA_05200 0.61 -0.1 700,230 - BACOVA_05200 0.61 -0.6 700,320 - BACOVA_05200 0.68 -0.9 700,337 + BACOVA_05200 0.70 -0.6 700,338 - BACOVA_05200 0.70 -1.8 700,386 - BACOVA_05200 0.74 -1.0 700,399 + BACOVA_05200 0.75 -0.5 700,426 + BACOVA_05200 0.77 +0.3 700,436 + BACOVA_05200 0.78 +0.6
Or see this region's nucleotide sequence