Experiment: MRS 1 x (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02478 and BACOVA_02479 are separated by 4 nucleotides BACOVA_02479 and BACOVA_02480 are separated by 0 nucleotides BACOVA_02480 and BACOVA_02481 are separated by 4 nucleotides
BACOVA_02478: BACOVA_02478 - transglycosylase, at 242,544 to 244,871
_02478
BACOVA_02479: BACOVA_02479 - putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 244,876 to 245,262
_02479
BACOVA_02480: BACOVA_02480 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 245,263 to 246,015
_02480
BACOVA_02481: BACOVA_02481 - peptidase M16 inactive domain protein, at 246,020 to 247,303
_02481
Position (kb) 244
245
246 Strain fitness (log2 ratio) -1
0
1 at 245.249 kb on + strand at 245.249 kb on + strand at 245.249 kb on + strand at 245.253 kb on + strand at 246.006 kb on + strand at 246.007 kb on - strand at 246.013 kb on + strand at 246.014 kb on - strand at 246.020 kb on - strand at 246.028 kb on + strand at 246.028 kb on + strand at 246.034 kb on - strand at 246.150 kb on + strand, within BACOVA_02481 at 246.150 kb on + strand, within BACOVA_02481 at 246.150 kb on + strand, within BACOVA_02481 at 246.151 kb on - strand, within BACOVA_02481 at 246.151 kb on - strand, within BACOVA_02481 at 246.151 kb on - strand, within BACOVA_02481 at 246.244 kb on + strand, within BACOVA_02481
Per-strain Table
Position Strand Gene LocusTag Fraction MRS 1 x (C) complex media remove 245,249 + +1.5 245,249 + -0.7 245,249 + +1.3 245,253 + -1.0 246,006 + -1.1 246,007 - +0.6 246,013 + +1.2 246,014 - +0.8 246,020 - -0.2 246,028 + -0.6 246,028 + -1.5 246,034 - +0.8 246,150 + BACOVA_02481 0.10 +0.6 246,150 + BACOVA_02481 0.10 -0.7 246,150 + BACOVA_02481 0.10 -0.3 246,151 - BACOVA_02481 0.10 -0.4 246,151 - BACOVA_02481 0.10 -0.5 246,151 - BACOVA_02481 0.10 +1.5 246,244 + BACOVA_02481 0.17 -1.2
Or see this region's nucleotide sequence