Experiment: mer MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01978 and OHPLBJKB_01979 are separated by 9 nucleotides OHPLBJKB_01979 and OHPLBJKB_01980 overlap by 1 nucleotides OHPLBJKB_01980 and OHPLBJKB_01981 are separated by 14 nucleotides
OHPLBJKB_01978: OHPLBJKB_01978 - Protein YnjB, at 2,055,305 to 2,056,471
_01978
OHPLBJKB_01979: OHPLBJKB_01979 - hypothetical protein, at 2,056,481 to 2,057,029
_01979
OHPLBJKB_01980: OHPLBJKB_01980 - TVP38/TMEM64 family inner membrane protein YdjZ, at 2,057,029 to 2,057,736
_01980
OHPLBJKB_01981: OHPLBJKB_01981 - hypothetical protein, at 2,057,751 to 2,058,428
_01981
Position (kb)
2056
2057
2058 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2055.527 kb on + strand, within OHPLBJKB_01978 at 2055.527 kb on + strand, within OHPLBJKB_01978 at 2055.528 kb on - strand, within OHPLBJKB_01978 at 2055.528 kb on - strand, within OHPLBJKB_01978 at 2055.615 kb on + strand, within OHPLBJKB_01978 at 2055.615 kb on + strand, within OHPLBJKB_01978 at 2055.763 kb on - strand, within OHPLBJKB_01978 at 2055.784 kb on - strand, within OHPLBJKB_01978 at 2055.865 kb on + strand, within OHPLBJKB_01978 at 2055.919 kb on - strand, within OHPLBJKB_01978 at 2055.988 kb on + strand, within OHPLBJKB_01978 at 2056.095 kb on + strand, within OHPLBJKB_01978 at 2056.151 kb on + strand, within OHPLBJKB_01978 at 2056.151 kb on + strand, within OHPLBJKB_01978 at 2056.152 kb on - strand, within OHPLBJKB_01978 at 2056.208 kb on - strand, within OHPLBJKB_01978 at 2056.208 kb on - strand, within OHPLBJKB_01978 at 2056.483 kb on - strand at 2056.541 kb on - strand, within OHPLBJKB_01979 at 2056.541 kb on - strand, within OHPLBJKB_01979 at 2056.541 kb on - strand, within OHPLBJKB_01979 at 2056.844 kb on + strand, within OHPLBJKB_01979 at 2056.844 kb on + strand, within OHPLBJKB_01979 at 2056.845 kb on - strand, within OHPLBJKB_01979 at 2056.845 kb on - strand, within OHPLBJKB_01979 at 2056.906 kb on - strand, within OHPLBJKB_01979 at 2056.906 kb on - strand, within OHPLBJKB_01979 at 2056.906 kb on - strand, within OHPLBJKB_01979 at 2057.074 kb on - strand at 2057.104 kb on - strand, within OHPLBJKB_01980 at 2057.140 kb on + strand, within OHPLBJKB_01980 at 2057.141 kb on - strand, within OHPLBJKB_01980 at 2057.141 kb on - strand, within OHPLBJKB_01980 at 2057.162 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.243 kb on + strand, within OHPLBJKB_01980 at 2057.244 kb on - strand, within OHPLBJKB_01980 at 2057.571 kb on + strand, within OHPLBJKB_01980 at 2057.581 kb on + strand, within OHPLBJKB_01980 at 2057.581 kb on + strand, within OHPLBJKB_01980 at 2057.581 kb on + strand, within OHPLBJKB_01980 at 2057.581 kb on + strand, within OHPLBJKB_01980 at 2057.581 kb on + strand, within OHPLBJKB_01980 at 2057.582 kb on - strand, within OHPLBJKB_01980 at 2057.670 kb on + strand at 2057.697 kb on + strand at 2057.698 kb on - strand at 2057.698 kb on - strand at 2057.703 kb on - strand at 2057.766 kb on - strand at 2057.825 kb on + strand, within OHPLBJKB_01981 at 2057.854 kb on + strand, within OHPLBJKB_01981 at 2057.854 kb on + strand, within OHPLBJKB_01981 at 2057.854 kb on + strand, within OHPLBJKB_01981 at 2057.854 kb on + strand, within OHPLBJKB_01981 at 2057.855 kb on - strand, within OHPLBJKB_01981 at 2057.855 kb on - strand, within OHPLBJKB_01981 at 2057.855 kb on - strand, within OHPLBJKB_01981 at 2057.855 kb on - strand, within OHPLBJKB_01981 at 2057.860 kb on + strand, within OHPLBJKB_01981 at 2057.860 kb on + strand, within OHPLBJKB_01981 at 2057.860 kb on + strand, within OHPLBJKB_01981 at 2057.860 kb on + strand, within OHPLBJKB_01981 at 2057.860 kb on + strand, within OHPLBJKB_01981 at 2057.861 kb on - strand, within OHPLBJKB_01981 at 2057.861 kb on - strand, within OHPLBJKB_01981 at 2057.861 kb on - strand, within OHPLBJKB_01981 at 2057.861 kb on - strand, within OHPLBJKB_01981 at 2057.861 kb on - strand, within OHPLBJKB_01981 at 2057.908 kb on - strand, within OHPLBJKB_01981 at 2058.007 kb on + strand, within OHPLBJKB_01981 at 2058.008 kb on - strand, within OHPLBJKB_01981 at 2058.008 kb on - strand, within OHPLBJKB_01981
Per-strain Table
Position Strand Gene LocusTag Fraction mer MOI10 remove 2,055,527 + OHPLBJKB_01978 0.19 +0.1 2,055,527 + OHPLBJKB_01978 0.19 +1.1 2,055,528 - OHPLBJKB_01978 0.19 -1.0 2,055,528 - OHPLBJKB_01978 0.19 -1.1 2,055,615 + OHPLBJKB_01978 0.27 -0.3 2,055,615 + OHPLBJKB_01978 0.27 -0.5 2,055,763 - OHPLBJKB_01978 0.39 +0.7 2,055,784 - OHPLBJKB_01978 0.41 -0.2 2,055,865 + OHPLBJKB_01978 0.48 +0.5 2,055,919 - OHPLBJKB_01978 0.53 +0.7 2,055,988 + OHPLBJKB_01978 0.59 -2.3 2,056,095 + OHPLBJKB_01978 0.68 -0.0 2,056,151 + OHPLBJKB_01978 0.72 -1.7 2,056,151 + OHPLBJKB_01978 0.72 -0.4 2,056,152 - OHPLBJKB_01978 0.73 -0.6 2,056,208 - OHPLBJKB_01978 0.77 +0.5 2,056,208 - OHPLBJKB_01978 0.77 +0.3 2,056,483 - -0.2 2,056,541 - OHPLBJKB_01979 0.11 -1.0 2,056,541 - OHPLBJKB_01979 0.11 +0.4 2,056,541 - OHPLBJKB_01979 0.11 -0.4 2,056,844 + OHPLBJKB_01979 0.66 -0.9 2,056,844 + OHPLBJKB_01979 0.66 -1.8 2,056,845 - OHPLBJKB_01979 0.66 +1.0 2,056,845 - OHPLBJKB_01979 0.66 +1.0 2,056,906 - OHPLBJKB_01979 0.77 -1.0 2,056,906 - OHPLBJKB_01979 0.77 -1.0 2,056,906 - OHPLBJKB_01979 0.77 +0.0 2,057,074 - -1.0 2,057,104 - OHPLBJKB_01980 0.11 -0.3 2,057,140 + OHPLBJKB_01980 0.16 -0.3 2,057,141 - OHPLBJKB_01980 0.16 -0.1 2,057,141 - OHPLBJKB_01980 0.16 -0.9 2,057,162 + OHPLBJKB_01980 0.19 -0.0 2,057,169 + OHPLBJKB_01980 0.20 +0.1 2,057,169 + OHPLBJKB_01980 0.20 +0.3 2,057,169 + OHPLBJKB_01980 0.20 -0.3 2,057,169 + OHPLBJKB_01980 0.20 +0.0 2,057,169 + OHPLBJKB_01980 0.20 +0.3 2,057,169 + OHPLBJKB_01980 0.20 +0.8 2,057,170 - OHPLBJKB_01980 0.20 +0.4 2,057,170 - OHPLBJKB_01980 0.20 +0.1 2,057,170 - OHPLBJKB_01980 0.20 +0.1 2,057,170 - OHPLBJKB_01980 0.20 +0.1 2,057,243 + OHPLBJKB_01980 0.30 +0.5 2,057,244 - OHPLBJKB_01980 0.30 -1.0 2,057,571 + OHPLBJKB_01980 0.77 -1.4 2,057,581 + OHPLBJKB_01980 0.78 -0.7 2,057,581 + OHPLBJKB_01980 0.78 -1.5 2,057,581 + OHPLBJKB_01980 0.78 -0.1 2,057,581 + OHPLBJKB_01980 0.78 +0.0 2,057,581 + OHPLBJKB_01980 0.78 -0.7 2,057,582 - OHPLBJKB_01980 0.78 +0.3 2,057,670 + -0.2 2,057,697 + +0.1 2,057,698 - +0.3 2,057,698 - -1.3 2,057,703 - -0.5 2,057,766 - +0.0 2,057,825 + OHPLBJKB_01981 0.11 +1.1 2,057,854 + OHPLBJKB_01981 0.15 +1.0 2,057,854 + OHPLBJKB_01981 0.15 -0.8 2,057,854 + OHPLBJKB_01981 0.15 +0.0 2,057,854 + OHPLBJKB_01981 0.15 +0.3 2,057,855 - OHPLBJKB_01981 0.15 +0.4 2,057,855 - OHPLBJKB_01981 0.15 -0.1 2,057,855 - OHPLBJKB_01981 0.15 +1.8 2,057,855 - OHPLBJKB_01981 0.15 +0.6 2,057,860 + OHPLBJKB_01981 0.16 +0.8 2,057,860 + OHPLBJKB_01981 0.16 -1.2 2,057,860 + OHPLBJKB_01981 0.16 +0.4 2,057,860 + OHPLBJKB_01981 0.16 -1.1 2,057,860 + OHPLBJKB_01981 0.16 +0.8 2,057,861 - OHPLBJKB_01981 0.16 -0.2 2,057,861 - OHPLBJKB_01981 0.16 +1.7 2,057,861 - OHPLBJKB_01981 0.16 +0.6 2,057,861 - OHPLBJKB_01981 0.16 +0.5 2,057,861 - OHPLBJKB_01981 0.16 -0.4 2,057,908 - OHPLBJKB_01981 0.23 +0.6 2,058,007 + OHPLBJKB_01981 0.38 +0.6 2,058,008 - OHPLBJKB_01981 0.38 -0.6 2,058,008 - OHPLBJKB_01981 0.38 +0.1
Or see this region's nucleotide sequence