Experiment: mer MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01774 and OHPLBJKB_01775 are separated by 225 nucleotides OHPLBJKB_01775 and OHPLBJKB_01776 are separated by 297 nucleotides OHPLBJKB_01776 and OHPLBJKB_01777 are separated by 162 nucleotides OHPLBJKB_01777 and OHPLBJKB_01778 are separated by 43 nucleotides
OHPLBJKB_01774: OHPLBJKB_01774 - Mannosyl-3-phosphoglycerate phosphatase, at 1,864,560 to 1,864,904
_01774
OHPLBJKB_01775: OHPLBJKB_01775 - Mannosyl-3-phosphoglycerate phosphatase, at 1,865,130 to 1,865,375
_01775
OHPLBJKB_01776: OHPLBJKB_01776 - hypothetical protein, at 1,865,673 to 1,865,900
_01776
OHPLBJKB_01777: OHPLBJKB_01777 - Protein DsrB, at 1,866,063 to 1,866,251
_01777
OHPLBJKB_01778: OHPLBJKB_01778 - Transcriptional regulatory protein RcsA, at 1,866,295 to 1,866,918
_01778
Position (kb)
1865
1866 Strain fitness (log2 ratio)
-2
-1
0
1 at 1864.780 kb on + strand, within OHPLBJKB_01774 at 1864.833 kb on + strand, within OHPLBJKB_01774 at 1864.833 kb on + strand, within OHPLBJKB_01774 at 1864.859 kb on + strand, within OHPLBJKB_01774 at 1864.859 kb on + strand, within OHPLBJKB_01774 at 1864.904 kb on + strand at 1864.980 kb on + strand at 1865.037 kb on - strand at 1865.037 kb on - strand at 1865.060 kb on + strand at 1865.060 kb on + strand at 1865.061 kb on - strand at 1865.061 kb on - strand at 1865.061 kb on - strand at 1865.094 kb on - strand at 1865.094 kb on - strand at 1865.122 kb on - strand at 1865.131 kb on + strand at 1865.131 kb on + strand at 1865.131 kb on + strand at 1865.210 kb on - strand, within OHPLBJKB_01775 at 1865.234 kb on + strand, within OHPLBJKB_01775 at 1865.235 kb on - strand, within OHPLBJKB_01775 at 1865.237 kb on + strand, within OHPLBJKB_01775 at 1865.237 kb on + strand, within OHPLBJKB_01775 at 1865.238 kb on - strand, within OHPLBJKB_01775 at 1865.238 kb on - strand, within OHPLBJKB_01775 at 1865.238 kb on - strand, within OHPLBJKB_01775 at 1865.253 kb on + strand, within OHPLBJKB_01775 at 1865.268 kb on + strand, within OHPLBJKB_01775 at 1865.305 kb on + strand, within OHPLBJKB_01775 at 1865.305 kb on + strand, within OHPLBJKB_01775 at 1865.305 kb on + strand, within OHPLBJKB_01775 at 1865.306 kb on - strand, within OHPLBJKB_01775 at 1865.309 kb on + strand, within OHPLBJKB_01775 at 1865.309 kb on + strand, within OHPLBJKB_01775 at 1865.309 kb on + strand, within OHPLBJKB_01775 at 1865.309 kb on + strand, within OHPLBJKB_01775 at 1865.309 kb on + strand, within OHPLBJKB_01775 at 1865.310 kb on - strand, within OHPLBJKB_01775 at 1865.310 kb on - strand, within OHPLBJKB_01775 at 1865.310 kb on - strand, within OHPLBJKB_01775 at 1865.310 kb on - strand, within OHPLBJKB_01775 at 1865.310 kb on - strand, within OHPLBJKB_01775 at 1865.376 kb on - strand at 1865.386 kb on + strand at 1865.498 kb on + strand at 1865.504 kb on + strand at 1865.607 kb on - strand at 1865.663 kb on + strand at 1865.744 kb on + strand, within OHPLBJKB_01776 at 1865.744 kb on + strand, within OHPLBJKB_01776 at 1865.744 kb on + strand, within OHPLBJKB_01776 at 1865.744 kb on + strand, within OHPLBJKB_01776 at 1865.744 kb on + strand, within OHPLBJKB_01776 at 1865.745 kb on - strand, within OHPLBJKB_01776 at 1865.745 kb on - strand, within OHPLBJKB_01776 at 1865.745 kb on - strand, within OHPLBJKB_01776 at 1865.745 kb on - strand, within OHPLBJKB_01776 at 1865.745 kb on - strand, within OHPLBJKB_01776 at 1865.745 kb on - strand, within OHPLBJKB_01776 at 1865.964 kb on + strand at 1865.964 kb on + strand at 1865.964 kb on + strand at 1865.964 kb on + strand at 1865.965 kb on - strand at 1865.965 kb on - strand at 1865.969 kb on - strand at 1865.969 kb on - strand at 1865.969 kb on - strand at 1865.969 kb on - strand at 1865.969 kb on - strand at 1865.970 kb on + strand at 1865.971 kb on - strand at 1866.159 kb on + strand, within OHPLBJKB_01777 at 1866.159 kb on + strand, within OHPLBJKB_01777 at 1866.160 kb on - strand, within OHPLBJKB_01777 at 1866.249 kb on + strand at 1866.316 kb on - strand at 1866.683 kb on - strand, within OHPLBJKB_01778 at 1866.763 kb on - strand, within OHPLBJKB_01778 at 1866.888 kb on - strand at 1866.891 kb on + strand at 1866.892 kb on - strand at 1866.896 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction mer MOI10 remove 1,864,780 + OHPLBJKB_01774 0.64 -0.3 1,864,833 + OHPLBJKB_01774 0.79 +0.5 1,864,833 + OHPLBJKB_01774 0.79 -0.2 1,864,859 + OHPLBJKB_01774 0.87 +0.4 1,864,859 + OHPLBJKB_01774 0.87 -0.1 1,864,904 + -0.7 1,864,980 + -0.1 1,865,037 - +0.0 1,865,037 - +0.4 1,865,060 + -0.2 1,865,060 + +1.2 1,865,061 - -0.1 1,865,061 - -0.6 1,865,061 - -0.8 1,865,094 - +0.8 1,865,094 - -0.5 1,865,122 - +0.8 1,865,131 + +0.7 1,865,131 + -0.2 1,865,131 + +0.1 1,865,210 - OHPLBJKB_01775 0.33 -1.0 1,865,234 + OHPLBJKB_01775 0.42 -1.1 1,865,235 - OHPLBJKB_01775 0.43 +0.6 1,865,237 + OHPLBJKB_01775 0.43 +0.1 1,865,237 + OHPLBJKB_01775 0.43 +0.2 1,865,238 - OHPLBJKB_01775 0.44 +0.2 1,865,238 - OHPLBJKB_01775 0.44 +0.3 1,865,238 - OHPLBJKB_01775 0.44 -0.6 1,865,253 + OHPLBJKB_01775 0.50 +0.2 1,865,268 + OHPLBJKB_01775 0.56 -2.1 1,865,305 + OHPLBJKB_01775 0.71 +0.4 1,865,305 + OHPLBJKB_01775 0.71 -1.6 1,865,305 + OHPLBJKB_01775 0.71 +1.2 1,865,306 - OHPLBJKB_01775 0.72 +0.6 1,865,309 + OHPLBJKB_01775 0.73 -0.6 1,865,309 + OHPLBJKB_01775 0.73 +1.0 1,865,309 + OHPLBJKB_01775 0.73 -0.8 1,865,309 + OHPLBJKB_01775 0.73 -0.1 1,865,309 + OHPLBJKB_01775 0.73 -0.4 1,865,310 - OHPLBJKB_01775 0.73 +0.8 1,865,310 - OHPLBJKB_01775 0.73 +1.2 1,865,310 - OHPLBJKB_01775 0.73 +0.1 1,865,310 - OHPLBJKB_01775 0.73 +0.2 1,865,310 - OHPLBJKB_01775 0.73 -0.3 1,865,376 - +0.1 1,865,386 + -1.1 1,865,498 + -0.6 1,865,504 + -0.1 1,865,607 - +0.9 1,865,663 + -0.3 1,865,744 + OHPLBJKB_01776 0.31 -1.0 1,865,744 + OHPLBJKB_01776 0.31 -0.2 1,865,744 + OHPLBJKB_01776 0.31 -0.4 1,865,744 + OHPLBJKB_01776 0.31 -0.1 1,865,744 + OHPLBJKB_01776 0.31 -0.2 1,865,745 - OHPLBJKB_01776 0.32 -0.4 1,865,745 - OHPLBJKB_01776 0.32 +0.5 1,865,745 - OHPLBJKB_01776 0.32 -2.4 1,865,745 - OHPLBJKB_01776 0.32 +0.9 1,865,745 - OHPLBJKB_01776 0.32 -0.4 1,865,745 - OHPLBJKB_01776 0.32 +0.9 1,865,964 + +0.6 1,865,964 + +0.0 1,865,964 + -0.5 1,865,964 + -0.3 1,865,965 - +1.3 1,865,965 - +1.0 1,865,969 - +0.8 1,865,969 - -0.2 1,865,969 - +0.2 1,865,969 - +0.9 1,865,969 - -2.2 1,865,970 + -0.2 1,865,971 - -1.2 1,866,159 + OHPLBJKB_01777 0.51 +0.8 1,866,159 + OHPLBJKB_01777 0.51 +1.0 1,866,160 - OHPLBJKB_01777 0.51 +0.4 1,866,249 + -0.5 1,866,316 - -0.5 1,866,683 - OHPLBJKB_01778 0.62 +0.4 1,866,763 - OHPLBJKB_01778 0.75 -1.3 1,866,888 - -2.0 1,866,891 + -0.8 1,866,892 - +1.6 1,866,896 - +1.1
Or see this region's nucleotide sequence