Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00017

Experiment: mer MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mer MOI10
15,840	+		OHPLBJKB_00015	0.65	-1.4
15,840	+		OHPLBJKB_00015	0.65	-0.5
15,840	+		OHPLBJKB_00015	0.65	-0.9
15,899	+		OHPLBJKB_00015	0.88	-0.7
15,952	+				-0.7
15,971	-				+0.5
15,971	-				-0.1
15,971	-				+0.7
15,997	+				+0.9
15,998	-				+0.4
16,005	+				+0.3
16,006	-				-0.5
16,006	-				+1.2
16,006	-				+0.8
16,044	+				+0.9
16,045	-				+0.7
16,046	+				-0.5
16,046	+				+0.5
16,047	-				+0.8
16,047	-				+0.2
16,067	-				-1.4
16,078	+				+0.1
16,078	+				-0.5
16,078	+				-1.1
16,078	+				+0.9
16,079	-				-0.7
16,079	-				-1.0
16,079	-				-0.5
16,140	+				-0.7
16,140	+				+0.8
16,141	-				+0.6
16,147	+				+0.8
16,148	-				+1.0
16,207	-				+0.9
16,207	-				-0.0
16,207	-				+0.8
16,213	+				-0.5
16,213	+				-0.0
16,276	+				-0.0
16,276	+				+0.3
16,277	-				-0.4
16,277	-				-0.5
16,277	-				-0.1
16,277	-				-1.1
16,277	-				-0.1
16,277	-				+0.6
16,300	+				-0.6
16,300	+				+0.5
16,301	-				-1.2
16,313	+				+0.4
16,313	+				+0.4
16,335	+				-0.9
16,336	-				-1.5
16,376	-		OHPLBJKB_00016	0.16	-0.1
16,397	+		OHPLBJKB_00016	0.21	+0.1
16,416	+		OHPLBJKB_00016	0.26	-0.2
16,416	+		OHPLBJKB_00016	0.26	+0.7
16,417	-		OHPLBJKB_00016	0.26	-1.0
16,419	-		OHPLBJKB_00016	0.27	-0.6
16,419	-		OHPLBJKB_00016	0.27	-1.1
16,419	-		OHPLBJKB_00016	0.27	+0.1
16,419	-		OHPLBJKB_00016	0.27	-0.2
16,433	-		OHPLBJKB_00016	0.30	-0.0
16,560	+		OHPLBJKB_00016	0.61	-2.0
16,560	+		OHPLBJKB_00016	0.61	+0.5
16,560	+		OHPLBJKB_00016	0.61	-1.2
16,560	+		OHPLBJKB_00016	0.61	+0.7
16,560	+		OHPLBJKB_00016	0.61	-0.6
16,560	+		OHPLBJKB_00016	0.61	-0.2
16,560	+		OHPLBJKB_00016	0.61	-0.3
16,560	+		OHPLBJKB_00016	0.61	-1.8
16,561	-		OHPLBJKB_00016	0.61	-0.2
16,561	-		OHPLBJKB_00016	0.61	+0.2
16,566	+		OHPLBJKB_00016	0.62	+0.7
16,567	-		OHPLBJKB_00016	0.63	+0.0
16,646	-		OHPLBJKB_00016	0.82	-1.8
16,646	-		OHPLBJKB_00016	0.82	+0.7
16,646	-		OHPLBJKB_00016	0.82	+1.3
16,659	+		OHPLBJKB_00016	0.85	+0.7
16,659	+		OHPLBJKB_00016	0.85	+0.0
16,659	+		OHPLBJKB_00016	0.85	+0.0
16,659	+		OHPLBJKB_00016	0.85	+0.7
16,659	+		OHPLBJKB_00016	0.85	+0.7
16,660	-		OHPLBJKB_00016	0.85	+0.3
16,660	-		OHPLBJKB_00016	0.85	-0.3
16,660	-		OHPLBJKB_00016	0.85	+0.3
16,660	-		OHPLBJKB_00016	0.85	-1.2
16,660	-		OHPLBJKB_00016	0.85	-0.5
16,660	-		OHPLBJKB_00016	0.85	-1.1
16,660	-		OHPLBJKB_00016	0.85	-0.3
16,660	-		OHPLBJKB_00016	0.85	-2.6
16,662	-		OHPLBJKB_00016	0.86	-0.4
16,719	+				-0.6
16,720	-				+0.2
16,720	-				+0.3
16,720	-				-0.1
16,720	-				-0.8
16,801	+				+0.3
16,801	+				+0.2
16,801	+				+0.1
16,805	+				-0.4
16,806	-				-0.6
16,806	-				-0.3
16,816	+				+0.1
16,816	+				+0.1
16,816	+				+0.5
16,816	+				-0.4
16,816	+				+1.0
16,817	-				-0.3
16,832	+				+1.8
16,832	+				-0.0
16,832	+				-0.2
16,838	+				+0.5
16,838	+				+0.1
16,839	-				-0.9
16,936	-		OHPLBJKB_00017	0.24	-0.1
16,974	-		OHPLBJKB_00017	0.33	-0.8
17,009	-		OHPLBJKB_00017	0.41	+0.6
17,027	+		OHPLBJKB_00017	0.45	-0.6
17,028	-		OHPLBJKB_00017	0.45	+0.4
17,096	+		OHPLBJKB_00017	0.61	+0.4
17,096	+		OHPLBJKB_00017	0.61	+0.7
17,097	-		OHPLBJKB_00017	0.62	+0.1
17,165	-		OHPLBJKB_00017	0.77	+0.1
17,181	-		OHPLBJKB_00017	0.81	+0.8
17,189	-		OHPLBJKB_00017	0.83	+0.8
17,226	-				-1.3
17,255	+				-0.2
17,255	+				+0.1
17,255	+				+0.2
17,256	-				+0.7
17,256	-				+0.2
17,259	+				-0.4
17,263	+				+0.7
17,263	+				+0.2
17,263	+				+0.9
17,263	+				-1.0
17,263	+				+0.6
17,263	+				-0.0
17,263	+				-0.8
17,263	+				+0.2
17,263	+				-0.6
17,264	-				-0.5
17,264	-				-0.2
17,264	-				-1.3
17,264	-				+0.1
17,264	-				+0.5
17,264	-				+0.5
17,264	-				-0.7
17,264	-				-0.5
17,267	+				-0.2
17,268	-				+0.3
17,268	-				+0.3
17,268	-				-0.1
17,373	+				-0.3
17,374	-				+0.8
17,383	+				-0.8
17,385	+				-0.1
17,429	+				+0.2
17,430	-				+0.3
17,437	+				+0.1
17,465	+				+0.1
17,466	-				-0.1
17,466	-				+0.5
17,467	+				+0.2
17,467	+				+0.2
17,467	+				-0.4
17,467	+				-0.6
17,467	+				-0.4
17,467	+				-0.0
17,467	+				+0.4
17,467	+				-1.2
17,467	+				+0.2
17,468	-				+0.2
17,468	-				-0.5
17,468	-				-0.2
17,468	-				-0.3
17,468	-				+0.4
17,468	-				-0.8
17,474	-				-1.9
17,543	-				-0.6
17,543	-				-0.2
17,548	+				-0.1
17,548	+				+0.6
17,548	+				-0.4
17,548	+				+0.6
17,548	+				+0.5
17,548	+				+0.2
17,549	-				-0.1
17,549	-				-0.2
17,549	-				+0.1
17,549	-				-0.2
17,549	-				-0.3
17,549	-				+0.1
17,553	-				-0.4
17,617	+				-0.2
17,617	+				-0.3
17,618	-				-0.1
17,618	-				-0.4
17,618	-				+0.2
17,618	-				-0.2
17,618	-				-0.2
17,618	-				-0.5
17,618	-				-0.2
17,618	-				-0.7
17,622	-				-0.6
17,627	+		OHPLBJKB_00018	0.10	-0.7
17,627	+		OHPLBJKB_00018	0.10	-0.6
17,628	-		OHPLBJKB_00018	0.10	+0.7
17,640	-		OHPLBJKB_00018	0.11	-1.5
17,640	-		OHPLBJKB_00018	0.11	-0.0
17,670	+		OHPLBJKB_00018	0.13	-0.1
17,670	+		OHPLBJKB_00018	0.13	+0.0
17,671	-		OHPLBJKB_00018	0.13	+0.4
17,671	-		OHPLBJKB_00018	0.13	+0.2
17,729	-		OHPLBJKB_00018	0.16	-0.7
17,793	-		OHPLBJKB_00018	0.20	-1.0
17,804	+		OHPLBJKB_00018	0.21	-0.1
17,852	+		OHPLBJKB_00018	0.24	-0.3
17,897	+		OHPLBJKB_00018	0.26	-1.1
17,898	-		OHPLBJKB_00018	0.27	+1.1
17,934	+		OHPLBJKB_00018	0.29	-0.6
17,935	-		OHPLBJKB_00018	0.29	-0.3
17,946	+		OHPLBJKB_00018	0.29	+0.5
18,098	+		OHPLBJKB_00018	0.39	-0.6
18,113	-		OHPLBJKB_00018	0.39	-0.3
18,113	-		OHPLBJKB_00018	0.39	-0.6
18,127	+		OHPLBJKB_00018	0.40	-0.2
18,127	+		OHPLBJKB_00018	0.40	-1.0
18,127	+		OHPLBJKB_00018	0.40	-1.3
18,128	-		OHPLBJKB_00018	0.40	+0.5
18,128	-		OHPLBJKB_00018	0.40	-0.1
18,128	-		OHPLBJKB_00018	0.40	-0.0
18,128	-		OHPLBJKB_00018	0.40	+0.2
18,131	+		OHPLBJKB_00018	0.41	+0.6
18,131	+		OHPLBJKB_00018	0.41	-0.1
18,131	+		OHPLBJKB_00018	0.41	+0.6
18,132	-		OHPLBJKB_00018	0.41	-0.9
18,132	-		OHPLBJKB_00018	0.41	+0.2
18,132	-		OHPLBJKB_00018	0.41	-1.4
18,132	-		OHPLBJKB_00018	0.41	+2.9
18,152	+		OHPLBJKB_00018	0.42	-0.7
18,203	+		OHPLBJKB_00018	0.45	-0.1
18,203	+		OHPLBJKB_00018	0.45	-0.2
18,256	+		OHPLBJKB_00018	0.48	-0.2
18,256	+		OHPLBJKB_00018	0.48	-0.5
18,256	+		OHPLBJKB_00018	0.48	-0.6
18,257	-		OHPLBJKB_00018	0.48	-0.5
18,260	+		OHPLBJKB_00018	0.48	+0.5
18,260	+		OHPLBJKB_00018	0.48	+0.9
18,261	-		OHPLBJKB_00018	0.48	+0.3