Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00384

Experiment: marine_broth_2216 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00383 and BACOVA_00384 overlap by 4 nucleotidesBACOVA_00384 and BACOVA_00385 are separated by 86 nucleotides BACOVA_00383: BACOVA_00383 - hypothetical protein, at 6,642 to 7,769 _00383 BACOVA_00384: BACOVA_00384 - hypothetical protein, at 7,766 to 7,948 _00384 BACOVA_00385: BACOVA_00385 - hypothetical protein, at 8,035 to 10,191 _00385 Position (kb) 7 8Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 6.824 kb on + strand, within BACOVA_00383at 6.886 kb on - strand, within BACOVA_00383at 6.896 kb on - strand, within BACOVA_00383at 6.910 kb on - strand, within BACOVA_00383at 6.924 kb on + strand, within BACOVA_00383at 6.924 kb on + strand, within BACOVA_00383at 6.924 kb on + strand, within BACOVA_00383at 6.925 kb on - strand, within BACOVA_00383at 6.925 kb on - strand, within BACOVA_00383at 6.925 kb on - strand, within BACOVA_00383at 6.925 kb on - strand, within BACOVA_00383at 6.928 kb on - strand, within BACOVA_00383at 6.929 kb on + strand, within BACOVA_00383at 6.932 kb on - strand, within BACOVA_00383at 6.978 kb on + strand, within BACOVA_00383at 6.999 kb on - strand, within BACOVA_00383at 7.003 kb on - strand, within BACOVA_00383at 7.003 kb on - strand, within BACOVA_00383at 7.051 kb on - strand, within BACOVA_00383at 7.051 kb on - strand, within BACOVA_00383at 7.061 kb on - strand, within BACOVA_00383at 7.190 kb on + strand, within BACOVA_00383at 7.190 kb on + strand, within BACOVA_00383at 7.191 kb on - strand, within BACOVA_00383at 7.191 kb on - strand, within BACOVA_00383at 7.263 kb on + strand, within BACOVA_00383at 7.264 kb on - strand, within BACOVA_00383at 7.264 kb on - strand, within BACOVA_00383at 7.275 kb on + strand, within BACOVA_00383at 7.275 kb on + strand, within BACOVA_00383at 7.275 kb on + strand, within BACOVA_00383at 7.276 kb on - strand, within BACOVA_00383at 7.276 kb on - strand, within BACOVA_00383at 7.277 kb on + strand, within BACOVA_00383at 7.277 kb on + strand, within BACOVA_00383at 7.277 kb on + strand, within BACOVA_00383at 7.278 kb on - strand, within BACOVA_00383at 7.278 kb on - strand, within BACOVA_00383at 7.342 kb on + strand, within BACOVA_00383at 7.343 kb on - strand, within BACOVA_00383at 7.414 kb on + strand, within BACOVA_00383at 7.451 kb on + strand, within BACOVA_00383at 7.520 kb on - strand, within BACOVA_00383at 7.535 kb on + strand, within BACOVA_00383at 7.535 kb on + strand, within BACOVA_00383at 7.536 kb on - strand, within BACOVA_00383at 7.585 kb on + strand, within BACOVA_00383at 7.586 kb on - strand, within BACOVA_00383at 7.670 kb on + strandat 7.751 kb on + strandat 7.755 kb on + strandat 7.756 kb on - strandat 7.818 kb on - strand, within BACOVA_00384at 7.818 kb on - strand, within BACOVA_00384at 7.820 kb on + strand, within BACOVA_00384at 7.840 kb on + strand, within BACOVA_00384at 7.840 kb on + strand, within BACOVA_00384at 7.849 kb on + strand, within BACOVA_00384at 7.850 kb on - strand, within BACOVA_00384at 7.850 kb on - strand, within BACOVA_00384at 7.899 kb on + strand, within BACOVA_00384at 7.900 kb on - strand, within BACOVA_00384at 7.925 kb on + strand, within BACOVA_00384at 7.925 kb on + strand, within BACOVA_00384at 7.925 kb on + strand, within BACOVA_00384at 7.925 kb on + strand, within BACOVA_00384at 7.925 kb on + strand, within BACOVA_00384at 7.926 kb on - strand, within BACOVA_00384at 7.926 kb on - strand, within BACOVA_00384at 7.926 kb on - strand, within BACOVA_00384at 7.926 kb on - strand, within BACOVA_00384at 7.927 kb on + strand, within BACOVA_00384at 7.944 kb on + strandat 7.979 kb on + strandat 8.036 kb on + strandat 8.036 kb on + strandat 8.062 kb on - strandat 8.101 kb on - strandat 8.102 kb on + strandat 8.245 kb on - strandat 8.248 kb on - strandat 8.257 kb on + strand, within BACOVA_00385at 8.316 kb on + strand, within BACOVA_00385at 8.317 kb on - strand, within BACOVA_00385at 8.317 kb on - strand, within BACOVA_00385at 8.317 kb on - strand, within BACOVA_00385at 8.318 kb on + strand, within BACOVA_00385at 8.319 kb on - strand, within BACOVA_00385at 8.320 kb on + strand, within BACOVA_00385at 8.321 kb on - strand, within BACOVA_00385at 8.450 kb on + strand, within BACOVA_00385at 8.451 kb on - strand, within BACOVA_00385at 8.467 kb on - strand, within BACOVA_00385at 8.533 kb on + strand, within BACOVA_00385at 8.539 kb on - strand, within BACOVA_00385at 8.552 kb on + strand, within BACOVA_00385at 8.613 kb on - strand, within BACOVA_00385at 8.620 kb on + strand, within BACOVA_00385at 8.623 kb on + strand, within BACOVA_00385at 8.623 kb on + strand, within BACOVA_00385at 8.648 kb on + strand, within BACOVA_00385at 8.667 kb on + strand, within BACOVA_00385at 8.798 kb on + strand, within BACOVA_00385at 8.798 kb on + strand, within BACOVA_00385at 8.799 kb on - strand, within BACOVA_00385at 8.871 kb on - strand, within BACOVA_00385at 8.871 kb on - strand, within BACOVA_00385at 8.874 kb on + strand, within BACOVA_00385

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 1 x (C) complex media
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6,824 + BACOVA_00383 0.16 -0.2
6,886 - BACOVA_00383 0.22 -1.3
6,896 - BACOVA_00383 0.23 +1.1
6,910 - BACOVA_00383 0.24 -0.2
6,924 + BACOVA_00383 0.25 -0.3
6,924 + BACOVA_00383 0.25 -0.1
6,924 + BACOVA_00383 0.25 +0.4
6,925 - BACOVA_00383 0.25 +0.4
6,925 - BACOVA_00383 0.25 +0.4
6,925 - BACOVA_00383 0.25 +0.5
6,925 - BACOVA_00383 0.25 -0.7
6,928 - BACOVA_00383 0.25 +0.3
6,929 + BACOVA_00383 0.25 -0.3
6,932 - BACOVA_00383 0.26 -0.2
6,978 + BACOVA_00383 0.30 -1.2
6,999 - BACOVA_00383 0.32 -0.3
7,003 - BACOVA_00383 0.32 +0.7
7,003 - BACOVA_00383 0.32 -0.3
7,051 - BACOVA_00383 0.36 +0.4
7,051 - BACOVA_00383 0.36 -0.7
7,061 - BACOVA_00383 0.37 +0.6
7,190 + BACOVA_00383 0.49 +1.9
7,190 + BACOVA_00383 0.49 +0.2
7,191 - BACOVA_00383 0.49 -0.4
7,191 - BACOVA_00383 0.49 +1.4
7,263 + BACOVA_00383 0.55 +0.5
7,264 - BACOVA_00383 0.55 -0.0
7,264 - BACOVA_00383 0.55 -0.2
7,275 + BACOVA_00383 0.56 +0.1
7,275 + BACOVA_00383 0.56 +0.7
7,275 + BACOVA_00383 0.56 -1.3
7,276 - BACOVA_00383 0.56 +0.3
7,276 - BACOVA_00383 0.56 +0.1
7,277 + BACOVA_00383 0.56 +0.6
7,277 + BACOVA_00383 0.56 -1.0
7,277 + BACOVA_00383 0.56 -0.1
7,278 - BACOVA_00383 0.56 +0.4
7,278 - BACOVA_00383 0.56 +0.3
7,342 + BACOVA_00383 0.62 -0.8
7,343 - BACOVA_00383 0.62 -0.0
7,414 + BACOVA_00383 0.68 +2.1
7,451 + BACOVA_00383 0.72 +0.3
7,520 - BACOVA_00383 0.78 +0.3
7,535 + BACOVA_00383 0.79 -0.3
7,535 + BACOVA_00383 0.79 -0.6
7,536 - BACOVA_00383 0.79 +0.2
7,585 + BACOVA_00383 0.84 -1.6
7,586 - BACOVA_00383 0.84 -0.4
7,670 + +0.8
7,751 + +0.3
7,755 + +0.9
7,756 - -0.3
7,818 - BACOVA_00384 0.28 +0.3
7,818 - BACOVA_00384 0.28 -0.9
7,820 + BACOVA_00384 0.30 -0.1
7,840 + BACOVA_00384 0.40 -0.5
7,840 + BACOVA_00384 0.40 +0.5
7,849 + BACOVA_00384 0.45 -0.2
7,850 - BACOVA_00384 0.46 -0.1
7,850 - BACOVA_00384 0.46 +0.4
7,899 + BACOVA_00384 0.73 -1.5
7,900 - BACOVA_00384 0.73 -0.4
7,925 + BACOVA_00384 0.87 -0.9
7,925 + BACOVA_00384 0.87 +0.1
7,925 + BACOVA_00384 0.87 -1.3
7,925 + BACOVA_00384 0.87 -0.1
7,925 + BACOVA_00384 0.87 -0.0
7,926 - BACOVA_00384 0.87 +0.5
7,926 - BACOVA_00384 0.87 +1.1
7,926 - BACOVA_00384 0.87 +0.3
7,926 - BACOVA_00384 0.87 +1.3
7,927 + BACOVA_00384 0.88 +1.4
7,944 + -2.2
7,979 + +1.1
8,036 + +0.3
8,036 + -1.3
8,062 - -0.5
8,101 - -0.7
8,102 + +0.1
8,245 - -1.9
8,248 - +0.4
8,257 + BACOVA_00385 0.10 +0.5
8,316 + BACOVA_00385 0.13 -3.0
8,317 - BACOVA_00385 0.13 -1.8
8,317 - BACOVA_00385 0.13 +0.9
8,317 - BACOVA_00385 0.13 -0.4
8,318 + BACOVA_00385 0.13 +0.8
8,319 - BACOVA_00385 0.13 +0.5
8,320 + BACOVA_00385 0.13 -0.0
8,321 - BACOVA_00385 0.13 -0.1
8,450 + BACOVA_00385 0.19 -0.1
8,451 - BACOVA_00385 0.19 -0.5
8,467 - BACOVA_00385 0.20 +0.7
8,533 + BACOVA_00385 0.23 -1.3
8,539 - BACOVA_00385 0.23 +0.9
8,552 + BACOVA_00385 0.24 -0.2
8,613 - BACOVA_00385 0.27 +0.8
8,620 + BACOVA_00385 0.27 +0.6
8,623 + BACOVA_00385 0.27 -1.1
8,623 + BACOVA_00385 0.27 -0.1
8,648 + BACOVA_00385 0.28 -0.2
8,667 + BACOVA_00385 0.29 -1.5
8,798 + BACOVA_00385 0.35 +0.0
8,798 + BACOVA_00385 0.35 -0.8
8,799 - BACOVA_00385 0.35 +0.1
8,871 - BACOVA_00385 0.39 +0.7
8,871 - BACOVA_00385 0.39 -0.0
8,874 + BACOVA_00385 0.39 +0.8

Or see this region's nucleotide sequence