Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00237

Experiment: marine_broth_2216 1 x (C) complex media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine_broth_2216 1 x (C) complex media
8,821	+		BACOVA_00235	0.14	+0.1
8,835	+		BACOVA_00235	0.16	+0.4
8,869	+		BACOVA_00235	0.21	+2.3
8,882	+		BACOVA_00235	0.23	-0.8
8,896	+		BACOVA_00235	0.25	+0.1
8,904	+		BACOVA_00235	0.26	+0.7
8,905	-		BACOVA_00235	0.26	-0.4
8,963	+		BACOVA_00235	0.34	-2.6
8,979	+		BACOVA_00235	0.36	+0.1
8,990	-		BACOVA_00235	0.37	-0.8
8,990	-		BACOVA_00235	0.37	-0.6
9,095	+		BACOVA_00235	0.52	-0.9
9,194	+		BACOVA_00235	0.65	-1.8
9,194	+		BACOVA_00235	0.65	+0.2
9,195	-		BACOVA_00235	0.65	-0.6
9,195	-		BACOVA_00235	0.65	-0.2
9,247	-		BACOVA_00235	0.72	-0.0
9,374	+		BACOVA_00235	0.90	+0.3
9,375	-		BACOVA_00235	0.90	+0.2
9,375	-		BACOVA_00235	0.90	+0.4
9,388	-				-1.2
9,476	-				-1.2
9,490	-				-1.1
9,521	+				+1.7
9,521	+				-0.7
9,581	+		BACOVA_00236	0.31	-0.7
9,594	-		BACOVA_00236	0.36	-1.4
9,594	-		BACOVA_00236	0.36	-0.3
9,596	-		BACOVA_00236	0.37	-0.3
9,596	-		BACOVA_00236	0.37	-0.6
9,598	+		BACOVA_00236	0.37	-0.5
9,599	-		BACOVA_00236	0.38	-1.0
9,599	-		BACOVA_00236	0.38	-0.7
9,617	+		BACOVA_00236	0.44	-0.5
9,617	+		BACOVA_00236	0.44	+0.5
9,618	-		BACOVA_00236	0.44	-1.3
9,618	-		BACOVA_00236	0.44	+0.4
9,627	+		BACOVA_00236	0.48	-0.6
9,627	+		BACOVA_00236	0.48	-0.4
9,627	+		BACOVA_00236	0.48	+2.0
9,641	+		BACOVA_00236	0.53	-1.2
9,644	-		BACOVA_00236	0.54	-0.7
9,671	-		BACOVA_00236	0.63	+0.3
9,674	+		BACOVA_00236	0.65	-1.6
9,674	+		BACOVA_00236	0.65	-1.0
9,681	+		BACOVA_00236	0.67	-0.4
9,689	-		BACOVA_00236	0.70	-0.1
9,707	-		BACOVA_00236	0.76	-1.7
9,758	+				+0.7
9,763	+				-0.1
9,764	-				-0.1
9,828	+				+0.3
9,844	+				+0.7
9,882	-				-1.3
9,936	+		BACOVA_00237	0.13	+1.1
9,936	+		BACOVA_00237	0.13	+1.0
9,936	+		BACOVA_00237	0.13	+0.9
9,936	+		BACOVA_00237	0.13	+0.5
9,936	+		BACOVA_00237	0.13	+0.2
9,937	-		BACOVA_00237	0.13	+0.5
9,937	-		BACOVA_00237	0.13	-0.1
9,938	+		BACOVA_00237	0.13	-0.6
9,939	-		BACOVA_00237	0.13	-0.5
9,939	-		BACOVA_00237	0.13	-1.3
9,985	+		BACOVA_00237	0.17	-0.4
9,985	+		BACOVA_00237	0.17	+0.2
9,986	-		BACOVA_00237	0.17	+0.7
9,986	-		BACOVA_00237	0.17	-0.7
9,988	+		BACOVA_00237	0.17	+0.8
9,989	-		BACOVA_00237	0.17	-0.3
9,990	+		BACOVA_00237	0.17	-0.1
9,991	-		BACOVA_00237	0.17	+0.2
9,991	-		BACOVA_00237	0.17	-0.4
9,992	+		BACOVA_00237	0.17	-0.2
9,992	+		BACOVA_00237	0.17	+1.0
9,992	+		BACOVA_00237	0.17	+1.0
9,992	+		BACOVA_00237	0.17	-0.3
9,993	-		BACOVA_00237	0.17	-0.0
10,002	+		BACOVA_00237	0.18	+0.5
10,073	-		BACOVA_00237	0.24	-0.5
10,180	+		BACOVA_00237	0.32	-0.3
10,181	-		BACOVA_00237	0.32	+0.1
10,241	-		BACOVA_00237	0.37	+0.3
10,241	-		BACOVA_00237	0.37	-1.1
10,243	-		BACOVA_00237	0.37	+0.2
10,244	+		BACOVA_00237	0.37	-0.0
10,244	+		BACOVA_00237	0.37	-0.8
10,245	-		BACOVA_00237	0.37	-0.6
10,245	-		BACOVA_00237	0.37	+0.3
10,245	-		BACOVA_00237	0.37	-1.8
10,246	+		BACOVA_00237	0.37	-0.1
10,246	+		BACOVA_00237	0.37	-0.0
10,246	+		BACOVA_00237	0.37	+0.4
10,246	+		BACOVA_00237	0.37	-0.7
10,248	+		BACOVA_00237	0.37	-0.0
10,248	+		BACOVA_00237	0.37	+0.3
10,249	-		BACOVA_00237	0.37	-0.8
10,249	-		BACOVA_00237	0.37	-1.8
10,249	-		BACOVA_00237	0.37	+0.3
10,258	-		BACOVA_00237	0.38	+1.4
10,258	-		BACOVA_00237	0.38	+0.6
10,317	+		BACOVA_00237	0.43	-0.5
10,318	-		BACOVA_00237	0.43	-0.6
10,348	+		BACOVA_00237	0.45	+0.7
10,349	-		BACOVA_00237	0.45	-0.6
10,349	-		BACOVA_00237	0.45	-0.8
10,349	-		BACOVA_00237	0.45	+1.7
10,369	+		BACOVA_00237	0.47	+0.4
10,403	+		BACOVA_00237	0.49	+0.8
10,403	+		BACOVA_00237	0.49	+0.4
10,416	+		BACOVA_00237	0.50	-1.1
10,470	+		BACOVA_00237	0.55	-0.3
10,483	-		BACOVA_00237	0.56	-0.5
10,486	+		BACOVA_00237	0.56	-0.6
10,486	+		BACOVA_00237	0.56	-0.8
10,487	-		BACOVA_00237	0.56	+0.2
10,497	+		BACOVA_00237	0.57	-0.5
10,515	+		BACOVA_00237	0.58	+0.9
10,539	+		BACOVA_00237	0.60	+0.4
10,556	-		BACOVA_00237	0.61	-0.8
10,596	+		BACOVA_00237	0.64	-1.1
10,607	+		BACOVA_00237	0.65	+1.7
10,658	-		BACOVA_00237	0.69	+0.8
10,746	+		BACOVA_00237	0.76	+0.1
10,746	+		BACOVA_00237	0.76	-1.1
10,763	+		BACOVA_00237	0.77	+0.7
10,786	-		BACOVA_00237	0.79	+0.2
10,786	-		BACOVA_00237	0.79	-2.5
10,813	-		BACOVA_00237	0.81	-0.0
10,906	+		BACOVA_00237	0.89	-0.6
10,907	-		BACOVA_00237	0.89	+1.1
10,907	-		BACOVA_00237	0.89	+1.1
10,909	-		BACOVA_00237	0.89	+1.5
10,909	-		BACOVA_00237	0.89	-0.9
10,909	-		BACOVA_00237	0.89	-1.5
10,984	+				-0.0
10,984	+				+1.3
10,984	+				+0.8
10,985	-				-0.5
11,018	-				-0.1
11,018	-				+0.3
11,064	-				-0.9
11,064	-				-0.1
11,064	-				-1.1
11,069	-				-2.0
11,082	+		BACOVA_00238	0.14	+0.6
11,105	+		BACOVA_00238	0.26	-0.6
11,105	+		BACOVA_00238	0.26	-1.9
11,106	-		BACOVA_00238	0.27	-0.8
11,106	-		BACOVA_00238	0.27	+0.5
11,145	+		BACOVA_00238	0.48	-1.3
11,145	+		BACOVA_00238	0.48	-0.5
11,146	-		BACOVA_00238	0.48	-0.5
11,149	+		BACOVA_00238	0.50	+0.1
11,178	+		BACOVA_00238	0.65	+0.2
11,180	+		BACOVA_00238	0.66	+0.3
11,181	-		BACOVA_00238	0.67	-0.0
11,181	-		BACOVA_00238	0.67	+1.8
11,206	-		BACOVA_00238	0.80	-0.4
11,241	+				-0.0
11,242	-				-1.3
11,242	-				+0.1
11,245	-				-0.9
11,261	-				-0.5
11,270	+				+0.4
11,270	+				+0.9
11,271	-				-0.0
11,282	-				-0.7
11,286	-				-0.3
11,330	+				+1.4
11,330	+				-0.9
11,338	+				-0.3
11,339	-				-0.3
11,339	-				-0.2
11,341	-				-1.4
11,344	-				-0.8
11,360	+				+0.3
11,375	+				-1.0
11,421	+				-1.3
11,438	+				-0.4
11,439	-				-1.8
11,463	-				+0.3
11,475	+				-0.3
11,485	-				-0.6
11,503	+				+0.5
11,528	+				-0.1
11,557	-				-1.5
11,573	+				-0.4
11,588	+				-0.3
11,600	+				-0.9
11,622	-				+0.1
11,637	+				-0.2
11,637	+				+1.5
11,638	-				+0.7
11,641	-				+0.4
11,641	-				+0.9
11,653	+				+1.1
11,731	-				+0.5
11,760	+				-1.3
11,760	+				+0.6
11,772	+				-0.8
11,834	+				-1.5
11,835	-				-1.5
11,835	-				+0.6
11,835	-				+0.1
11,835	-				+1.0
11,843	-				+0.5
11,856	-				-0.5
11,869	+		BACOVA_00239	0.10	-0.4
11,884	+		BACOVA_00239	0.10	+0.2
11,918	+		BACOVA_00239	0.11	+0.7
11,918	+		BACOVA_00239	0.11	+0.5
11,957	+		BACOVA_00239	0.12	+0.6
11,973	+		BACOVA_00239	0.13	-1.2
11,973	+		BACOVA_00239	0.13	+1.1
11,973	+		BACOVA_00239	0.13	-0.0
11,974	-		BACOVA_00239	0.13	+0.7
11,974	-		BACOVA_00239	0.13	+0.1
11,975	+		BACOVA_00239	0.13	-0.1
11,975	+		BACOVA_00239	0.13	-0.5
11,975	+		BACOVA_00239	0.13	+1.4
11,976	-		BACOVA_00239	0.13	-1.0
11,976	-		BACOVA_00239	0.13	+0.2
11,976	-		BACOVA_00239	0.13	-0.4
12,010	-		BACOVA_00239	0.14	-1.9
12,010	-		BACOVA_00239	0.14	-1.3
12,012	-		BACOVA_00239	0.14	-0.0
12,012	-		BACOVA_00239	0.14	-0.3
12,015	-		BACOVA_00239	0.14	+0.7
12,015	-		BACOVA_00239	0.14	-0.6