Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04247

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
4,464,467	-		OHPLBJKB_04245	0.56	-1.0
4,464,482	+		OHPLBJKB_04245	0.57	-0.4
4,464,499	-		OHPLBJKB_04245	0.58	-0.7
4,464,519	+		OHPLBJKB_04245	0.60	-0.5
4,464,520	-		OHPLBJKB_04245	0.60	-0.5
4,464,520	-		OHPLBJKB_04245	0.60	+0.4
4,464,520	-		OHPLBJKB_04245	0.60	+0.1
4,464,543	+		OHPLBJKB_04245	0.61	+2.8
4,464,568	+		OHPLBJKB_04245	0.63	+0.4
4,464,569	-		OHPLBJKB_04245	0.63	-1.1
4,464,612	+		OHPLBJKB_04245	0.67	+0.2
4,464,620	-		OHPLBJKB_04245	0.67	+1.6
4,464,666	-		OHPLBJKB_04245	0.71	-0.4
4,464,667	+		OHPLBJKB_04245	0.71	+0.5
4,464,668	-		OHPLBJKB_04245	0.71	-0.3
4,464,668	-		OHPLBJKB_04245	0.71	-0.8
4,464,668	-		OHPLBJKB_04245	0.71	-1.6
4,464,680	+		OHPLBJKB_04245	0.72	-1.2
4,464,680	+		OHPLBJKB_04245	0.72	-0.5
4,464,680	+		OHPLBJKB_04245	0.72	-0.3
4,464,680	+		OHPLBJKB_04245	0.72	+0.8
4,464,680	+		OHPLBJKB_04245	0.72	-1.1
4,464,680	+		OHPLBJKB_04245	0.72	-1.8
4,464,680	+		OHPLBJKB_04245	0.72	-0.7
4,464,681	-		OHPLBJKB_04245	0.72	-0.9
4,464,681	-		OHPLBJKB_04245	0.72	+0.1
4,464,681	-		OHPLBJKB_04245	0.72	-1.0
4,464,681	-		OHPLBJKB_04245	0.72	-1.0
4,464,681	-		OHPLBJKB_04245	0.72	-1.2
4,464,684	+		OHPLBJKB_04245	0.72	+0.0
4,464,724	-		OHPLBJKB_04245	0.75	+0.2
4,464,766	+		OHPLBJKB_04245	0.78	-0.6
4,464,770	-		OHPLBJKB_04245	0.79	-0.1
4,464,788	+		OHPLBJKB_04245	0.80	+0.0
4,464,788	+		OHPLBJKB_04245	0.80	-0.6
4,464,788	+		OHPLBJKB_04245	0.80	-0.6
4,464,789	-		OHPLBJKB_04245	0.80	-1.1
4,464,789	-		OHPLBJKB_04245	0.80	-1.5
4,464,789	-		OHPLBJKB_04245	0.80	+1.3
4,464,789	-		OHPLBJKB_04245	0.80	-0.2
4,464,789	-		OHPLBJKB_04245	0.80	-0.9
4,464,789	-		OHPLBJKB_04245	0.80	-0.7
4,464,804	+		OHPLBJKB_04245	0.81	+1.6
4,464,826	+		OHPLBJKB_04245	0.83	+0.0
4,464,851	-		OHPLBJKB_04245	0.85	-0.2
4,464,887	+		OHPLBJKB_04245	0.87	-0.4
4,464,889	+		OHPLBJKB_04245	0.87	+0.3
4,464,889	+		OHPLBJKB_04245	0.87	-0.1
4,464,889	+		OHPLBJKB_04245	0.87	+0.7
4,464,889	+		OHPLBJKB_04245	0.87	-0.4
4,464,889	+		OHPLBJKB_04245	0.87	-0.1
4,464,890	-		OHPLBJKB_04245	0.88	-1.1
4,464,890	-		OHPLBJKB_04245	0.88	-1.5
4,464,890	-		OHPLBJKB_04245	0.88	-0.4
4,464,890	-		OHPLBJKB_04245	0.88	-0.2
4,464,890	-		OHPLBJKB_04245	0.88	+0.2
4,464,890	-		OHPLBJKB_04245	0.88	+2.3
4,464,963	+				-0.5
4,464,963	+				-1.2
4,464,963	+				-0.3
4,464,964	-				-0.3
4,465,066	+				-0.8
4,465,067	-				-0.1
4,465,068	+				-0.1
4,465,069	-				-1.2
4,465,069	-				+0.3
4,465,095	+				-0.2
4,465,095	+				-0.7
4,465,224	+		OHPLBJKB_04246	0.38	+0.3
4,465,225	-		OHPLBJKB_04246	0.38	-0.3
4,465,225	-		OHPLBJKB_04246	0.38	+1.2
4,465,281	-		OHPLBJKB_04246	0.56	-0.6
4,465,472	+				-0.2
4,465,481	-				-1.3
4,465,481	-				+0.3
4,465,483	+				+1.3
4,465,491	+				-1.4
4,465,583	+				-0.7
4,465,584	-				-0.2
4,465,627	-				-0.1
4,465,649	+				-0.1
4,465,649	+				-0.1
4,465,650	-				-2.0
4,465,669	+				+1.3
4,465,670	-				-0.3
4,465,670	-				-0.2
4,465,703	+				+0.4
4,465,704	-				-1.0
4,465,704	-				-0.1
4,465,704	-				+0.2
4,465,705	+				+1.8
4,465,705	+				+3.3
4,465,706	-				-0.4
4,465,706	-				-2.0
4,465,706	-				-0.2
4,465,706	-				+0.8
4,465,706	-				-1.0
4,465,736	+		OHPLBJKB_04247	0.11	+0.3
4,465,737	-		OHPLBJKB_04247	0.11	-0.7
4,465,737	-		OHPLBJKB_04247	0.11	-0.2
4,465,740	+		OHPLBJKB_04247	0.11	+0.0
4,465,741	-		OHPLBJKB_04247	0.11	+0.3
4,465,743	+		OHPLBJKB_04247	0.11	+0.0
4,465,743	+		OHPLBJKB_04247	0.11	+0.3
4,465,889	+		OHPLBJKB_04247	0.17	-0.6
4,465,889	+		OHPLBJKB_04247	0.17	+0.3
4,465,890	-		OHPLBJKB_04247	0.17	-0.2
4,466,026	-		OHPLBJKB_04247	0.22	+0.8
4,466,026	-		OHPLBJKB_04247	0.22	+0.0
4,466,083	-		OHPLBJKB_04247	0.24	+0.8
4,466,083	-		OHPLBJKB_04247	0.24	-0.7
4,466,083	-		OHPLBJKB_04247	0.24	+1.3
4,466,104	-		OHPLBJKB_04247	0.25	-1.5
4,466,237	-		OHPLBJKB_04247	0.30	-0.2
4,466,237	-		OHPLBJKB_04247	0.30	+1.0
4,466,331	-		OHPLBJKB_04247	0.34	-0.2
4,466,331	-		OHPLBJKB_04247	0.34	-1.4
4,466,379	-		OHPLBJKB_04247	0.36	-0.5
4,466,379	-		OHPLBJKB_04247	0.36	-1.2
4,466,455	-		OHPLBJKB_04247	0.39	-0.7
4,466,481	+		OHPLBJKB_04247	0.40	-0.2
4,466,482	-		OHPLBJKB_04247	0.40	-0.5
4,466,487	-		OHPLBJKB_04247	0.40	-0.8
4,466,558	+		OHPLBJKB_04247	0.43	-0.5
4,466,558	+		OHPLBJKB_04247	0.43	+0.0
4,466,558	+		OHPLBJKB_04247	0.43	+1.8
4,466,558	+		OHPLBJKB_04247	0.43	-1.0
4,466,593	-		OHPLBJKB_04247	0.44	+1.3
4,466,593	-		OHPLBJKB_04247	0.44	-0.8
4,466,609	+		OHPLBJKB_04247	0.45	-0.5
4,466,609	+		OHPLBJKB_04247	0.45	-0.2
4,466,609	+		OHPLBJKB_04247	0.45	+0.8
4,466,610	-		OHPLBJKB_04247	0.45	+1.2
4,466,616	-		OHPLBJKB_04247	0.45	-0.7
4,466,651	+		OHPLBJKB_04247	0.47	+1.0
4,466,652	-		OHPLBJKB_04247	0.47	-0.2
4,466,652	-		OHPLBJKB_04247	0.47	-0.7
4,466,652	-		OHPLBJKB_04247	0.47	+0.0
4,466,655	+		OHPLBJKB_04247	0.47	+1.0
4,466,655	+		OHPLBJKB_04247	0.47	+0.0
4,466,656	-		OHPLBJKB_04247	0.47	-1.7
4,466,656	-		OHPLBJKB_04247	0.47	+0.8
4,466,749	-		OHPLBJKB_04247	0.51	-1.0
4,466,796	+		OHPLBJKB_04247	0.52	-1.7
4,468,005	-				-0.8
4,468,065	-				-1.0
4,468,091	-				+0.6
4,468,102	-				-0.6
4,468,158	-				-0.4
4,468,209	+				-1.7
4,468,210	-				-0.3
4,468,210	-				+0.6
4,468,210	-				+1.3
4,468,213	+				+0.2
4,468,213	+				-1.0
4,468,214	-				-0.8
4,468,214	-				-0.6
4,468,214	-				-1.1
4,468,214	-				+0.2
4,468,221	+				-1.4
4,468,221	+				+1.3
4,468,222	-				-0.7
4,468,231	+				-1.7
4,468,232	-				-0.3
4,468,252	+				+0.1
4,468,253	-				+0.1
4,468,299	+				+0.2
4,468,318	+				-0.1
4,468,318	+				-1.8
4,468,318	+				+0.8
4,468,318	+				-0.4
4,468,359	+				-0.2
4,468,378	+				-0.4
4,468,378	+				-0.7