Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03212

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
3,351,190	+		OHPLBJKB_03211	0.20	-1.8
3,351,205	+		OHPLBJKB_03211	0.21	-1.4
3,351,234	-		OHPLBJKB_03211	0.23	-2.3
3,351,254	+		OHPLBJKB_03211	0.25	-1.2
3,351,254	+		OHPLBJKB_03211	0.25	-2.6
3,351,255	-		OHPLBJKB_03211	0.25	-0.0
3,351,266	+		OHPLBJKB_03211	0.26	-0.5
3,351,267	-		OHPLBJKB_03211	0.26	-0.6
3,351,267	-		OHPLBJKB_03211	0.26	-0.1
3,351,267	-		OHPLBJKB_03211	0.26	-2.6
3,351,267	-		OHPLBJKB_03211	0.26	-3.1
3,351,362	+		OHPLBJKB_03211	0.34	-1.8
3,351,362	+		OHPLBJKB_03211	0.34	-1.2
3,351,363	-		OHPLBJKB_03211	0.34	-0.5
3,351,363	-		OHPLBJKB_03211	0.34	-1.3
3,351,370	+		OHPLBJKB_03211	0.35	-1.3
3,351,371	-		OHPLBJKB_03211	0.35	-0.9
3,351,380	+		OHPLBJKB_03211	0.36	-1.4
3,351,381	-		OHPLBJKB_03211	0.36	-0.5
3,351,470	+		OHPLBJKB_03211	0.43	-0.8
3,351,471	-		OHPLBJKB_03211	0.43	-2.2
3,351,509	-		OHPLBJKB_03211	0.46	-1.0
3,351,538	-		OHPLBJKB_03211	0.49	+1.0
3,351,590	+		OHPLBJKB_03211	0.53	-1.8
3,351,590	+		OHPLBJKB_03211	0.53	-2.0
3,351,590	+		OHPLBJKB_03211	0.53	-1.0
3,351,590	+		OHPLBJKB_03211	0.53	-1.8
3,351,590	+		OHPLBJKB_03211	0.53	-2.1
3,351,591	-		OHPLBJKB_03211	0.53	-2.5
3,351,591	-		OHPLBJKB_03211	0.53	-2.2
3,351,710	-		OHPLBJKB_03211	0.63	-1.3
3,351,748	+		OHPLBJKB_03211	0.66	-1.9
3,351,772	+		OHPLBJKB_03211	0.69	-1.2
3,351,773	-		OHPLBJKB_03211	0.69	-0.0
3,351,824	-		OHPLBJKB_03211	0.73	-0.8
3,351,921	+		OHPLBJKB_03211	0.81	-0.2
3,351,928	-		OHPLBJKB_03211	0.82	-1.4
3,351,928	-		OHPLBJKB_03211	0.82	-2.5
3,351,980	-		OHPLBJKB_03211	0.86	-1.5
3,352,029	+				-2.1
3,352,032	+				-1.3
3,352,032	+				-2.4
3,352,035	+				-1.8
3,352,035	+				-2.1
3,352,035	+				-1.1
3,352,036	-				-0.5
3,352,036	-				-1.0
3,352,071	+				+0.2
3,352,072	-				-1.0
3,352,100	-				-2.8
3,352,175	+				-0.2
3,352,176	-				-1.9
3,352,220	+				-2.0
3,352,278	-				-0.0
3,352,398	+				-2.4
3,352,398	+				-2.0
3,352,398	+				-0.7
3,352,398	+				-2.4
3,352,398	+				-0.8
3,352,398	+				-1.8
3,352,398	+				+0.4
3,352,398	+				-1.0
3,352,398	+				-2.0
3,352,398	+				-2.2
3,352,398	+				-0.8
3,352,398	+				-1.1
3,352,398	+				-1.3
3,352,398	+				-1.0
3,352,398	+				-1.0
3,352,410	-				-0.6
3,352,628	+		OHPLBJKB_03212	0.15	-1.7
3,352,639	-		OHPLBJKB_03212	0.15	-1.7
3,352,639	-		OHPLBJKB_03212	0.15	-1.8
3,352,868	+		OHPLBJKB_03212	0.22	-2.5
3,352,868	+		OHPLBJKB_03212	0.22	-1.6
3,352,871	+		OHPLBJKB_03212	0.22	-1.1
3,352,872	-		OHPLBJKB_03212	0.22	-1.4
3,352,992	+		OHPLBJKB_03212	0.26	-0.6
3,352,992	+		OHPLBJKB_03212	0.26	-1.0
3,352,992	+		OHPLBJKB_03212	0.26	-1.2
3,352,993	-		OHPLBJKB_03212	0.26	-2.4
3,352,993	-		OHPLBJKB_03212	0.26	-1.4
3,353,148	+		OHPLBJKB_03212	0.31	-1.1
3,353,177	+		OHPLBJKB_03212	0.32	-1.7
3,353,192	+		OHPLBJKB_03212	0.32	-1.7
3,353,193	-		OHPLBJKB_03212	0.32	-3.1
3,353,231	+		OHPLBJKB_03212	0.34	-0.2
3,353,231	+		OHPLBJKB_03212	0.34	-1.5
3,353,232	-		OHPLBJKB_03212	0.34	-0.9
3,353,232	-		OHPLBJKB_03212	0.34	-0.9
3,353,235	+		OHPLBJKB_03212	0.34	-1.2
3,353,235	+		OHPLBJKB_03212	0.34	-2.1
3,353,235	+		OHPLBJKB_03212	0.34	-2.0
3,353,235	+		OHPLBJKB_03212	0.34	-0.7
3,353,235	+		OHPLBJKB_03212	0.34	-1.9
3,353,235	+		OHPLBJKB_03212	0.34	-1.5
3,353,236	-		OHPLBJKB_03212	0.34	-2.3
3,353,236	-		OHPLBJKB_03212	0.34	-1.8
3,353,236	-		OHPLBJKB_03212	0.34	-1.6
3,353,236	-		OHPLBJKB_03212	0.34	-1.5
3,353,236	-		OHPLBJKB_03212	0.34	-2.1
3,353,236	-		OHPLBJKB_03212	0.34	-0.9
3,353,294	-		OHPLBJKB_03212	0.36	-1.4
3,353,427	-		OHPLBJKB_03212	0.40	-3.6
3,353,459	+		OHPLBJKB_03212	0.41	-2.7
3,353,466	-		OHPLBJKB_03212	0.41	+0.5
3,353,513	-		OHPLBJKB_03212	0.43	-1.1
3,353,555	+		OHPLBJKB_03212	0.44	+0.1
3,353,555	+		OHPLBJKB_03212	0.44	-1.5
3,353,555	+		OHPLBJKB_03212	0.44	-0.8
3,353,556	-		OHPLBJKB_03212	0.44	-2.1
3,353,556	-		OHPLBJKB_03212	0.44	-1.3
3,353,564	+		OHPLBJKB_03212	0.44	-1.5
3,353,564	+		OHPLBJKB_03212	0.44	-1.4
3,353,565	-		OHPLBJKB_03212	0.44	-0.2
3,353,565	-		OHPLBJKB_03212	0.44	-0.0
3,353,565	-		OHPLBJKB_03212	0.44	-0.5
3,353,565	-		OHPLBJKB_03212	0.44	-3.0
3,353,565	-		OHPLBJKB_03212	0.44	-1.5
3,353,568	+		OHPLBJKB_03212	0.44	-2.0
3,353,569	-		OHPLBJKB_03212	0.44	-2.2
3,353,569	-		OHPLBJKB_03212	0.44	+0.7
3,353,582	+		OHPLBJKB_03212	0.45	-1.7
3,353,583	-		OHPLBJKB_03212	0.45	-1.2
3,353,583	-		OHPLBJKB_03212	0.45	-1.4
3,353,583	-		OHPLBJKB_03212	0.45	-1.1
3,353,586	-		OHPLBJKB_03212	0.45	-1.1
3,353,761	+		OHPLBJKB_03212	0.51	-0.3
3,353,802	+		OHPLBJKB_03212	0.52	-2.3
3,353,802	+		OHPLBJKB_03212	0.52	-0.8
3,353,803	-		OHPLBJKB_03212	0.52	-1.0
3,353,803	-		OHPLBJKB_03212	0.52	-1.1
3,353,830	-		OHPLBJKB_03212	0.53	-2.7
3,353,830	-		OHPLBJKB_03212	0.53	-0.0
3,353,881	+		OHPLBJKB_03212	0.54	-1.8
3,353,885	+		OHPLBJKB_03212	0.54	-0.8
3,353,885	+		OHPLBJKB_03212	0.54	-0.6
3,353,885	+		OHPLBJKB_03212	0.54	-0.8
3,353,885	+		OHPLBJKB_03212	0.54	-1.0
3,353,885	+		OHPLBJKB_03212	0.54	-1.1
3,353,886	-		OHPLBJKB_03212	0.54	-2.4
3,353,928	-		OHPLBJKB_03212	0.56	-0.2
3,353,958	+		OHPLBJKB_03212	0.57	-1.3
3,353,958	+		OHPLBJKB_03212	0.57	-1.3
3,354,038	+		OHPLBJKB_03212	0.59	+0.0
3,354,110	+		OHPLBJKB_03212	0.62	-2.8
3,354,111	-		OHPLBJKB_03212	0.62	-0.6
3,354,111	-		OHPLBJKB_03212	0.62	-2.0
3,354,168	-		OHPLBJKB_03212	0.63	-0.5
3,354,303	-		OHPLBJKB_03212	0.68	-0.9
3,354,316	+		OHPLBJKB_03212	0.68	-0.9
3,354,317	-		OHPLBJKB_03212	0.68	-1.0
3,354,317	-		OHPLBJKB_03212	0.68	-2.8
3,354,441	+		OHPLBJKB_03212	0.72	-1.7
3,354,441	+		OHPLBJKB_03212	0.72	-2.6
3,354,441	+		OHPLBJKB_03212	0.72	+0.3
3,354,441	+		OHPLBJKB_03212	0.72	+0.5
3,354,483	+		OHPLBJKB_03212	0.73	-0.5
3,354,483	+		OHPLBJKB_03212	0.73	-1.3
3,354,504	+		OHPLBJKB_03212	0.74	-2.3
3,354,505	-		OHPLBJKB_03212	0.74	-2.0
3,354,509	+		OHPLBJKB_03212	0.74	-2.0
3,354,537	+		OHPLBJKB_03212	0.75	-1.7
3,354,538	-		OHPLBJKB_03212	0.75	-0.3
3,354,538	-		OHPLBJKB_03212	0.75	+0.5
3,354,538	-		OHPLBJKB_03212	0.75	-0.9
3,354,538	-		OHPLBJKB_03212	0.75	-0.5
3,354,759	+		OHPLBJKB_03212	0.82	-1.8
3,354,799	-		OHPLBJKB_03212	0.83	-1.8
3,354,843	+		OHPLBJKB_03212	0.85	-3.0
3,354,945	+		OHPLBJKB_03212	0.88	-1.7
3,354,955	+		OHPLBJKB_03212	0.88	-0.9
3,355,001	+		OHPLBJKB_03212	0.90	-2.0
3,355,001	+		OHPLBJKB_03212	0.90	-1.1
3,355,002	-		OHPLBJKB_03212	0.90	-1.4
3,355,002	-		OHPLBJKB_03212	0.90	-2.3
3,355,040	+				-1.2
3,355,041	-				-1.4
3,355,084	+				-2.3
3,355,085	-				-0.9
3,355,085	-				-1.2
3,355,177	+				-0.9
3,355,177	+				-1.4
3,355,178	-				-2.1
3,355,178	-				-0.4
3,355,286	+				-0.4
3,355,321	-				-1.5
3,355,330	-				-0.9
3,355,360	+				-0.1
3,355,361	-				+0.0
3,355,371	+				-1.2
3,355,387	+				+0.7
3,355,387	+				+1.9
3,355,388	-				-0.2
3,355,414	+				-0.4
3,355,475	-				-0.0
3,355,475	-				-0.5
3,355,477	-				+0.3
3,355,479	+				+1.1
3,355,483	+				+0.3
3,355,492	+				+0.0
3,355,499	-				+0.7
3,355,575	+				-0.1
3,355,575	+				-0.1
3,355,596	+				+0.9
3,355,638	-				-0.1
3,355,681	+				+0.5
3,355,685	-				+0.5
3,355,717	+				-0.1
3,355,718	-				-1.0
3,355,718	-				+1.3
3,355,718	-				-0.1
3,355,718	-				+1.0
3,355,734	-				-1.1
3,355,737	-				+0.0
3,355,766	+				-1.7
3,355,768	+				-1.5
3,355,768	+				+0.9
3,355,768	+				+0.8
3,355,769	-				+0.0
3,355,769	-				+0.2
3,355,769	-				-0.8
3,355,769	-				+1.0
3,355,769	-				-1.2
3,355,769	-				+0.1
3,355,772	+				-1.2
3,355,773	-				+1.0
3,355,773	-				+0.6
3,355,773	-				-0.9
3,355,778	-				+1.3
3,355,778	-				-0.5
3,355,807	-				-0.6
3,355,807	-				+0.0
3,355,874	+				-0.3
3,355,875	-				-1.3
3,355,906	+		OHPLBJKB_03213	0.11	-1.3
3,355,906	+		OHPLBJKB_03213	0.11	-0.5
3,355,928	+		OHPLBJKB_03213	0.17	-0.3
3,356,057	-		OHPLBJKB_03213	0.51	-0.0
3,356,061	-		OHPLBJKB_03213	0.52	+1.0
3,356,061	-		OHPLBJKB_03213	0.52	-0.5
3,356,061	-		OHPLBJKB_03213	0.52	-0.2
3,356,062	+		OHPLBJKB_03213	0.53	+1.4
3,356,063	-		OHPLBJKB_03213	0.53	+1.8
3,356,099	+		OHPLBJKB_03213	0.62	+0.7
3,356,099	+		OHPLBJKB_03213	0.62	-0.1
3,356,116	+		OHPLBJKB_03213	0.67	+1.7
3,356,128	+		OHPLBJKB_03213	0.70	+0.4
3,356,133	-		OHPLBJKB_03213	0.71	+0.0
3,356,133	-		OHPLBJKB_03213	0.71	-0.9
3,356,140	+		OHPLBJKB_03213	0.73	-0.4
3,356,230	-				-0.0
3,356,243	+				-0.0
3,356,244	-				-1.0
3,356,259	-				+0.1
3,356,264	+				+2.3
3,356,264	+				+1.0
3,356,265	-				+0.3
3,356,265	-				-0.9