Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02113

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
2,189,805	-		OHPLBJKB_02112	0.43	-0.1
2,189,851	+		OHPLBJKB_02112	0.46	+0.5
2,189,851	+		OHPLBJKB_02112	0.46	+0.5
2,189,852	-		OHPLBJKB_02112	0.47	-1.0
2,189,852	-		OHPLBJKB_02112	0.47	+1.3
2,190,016	+		OHPLBJKB_02112	0.57	-0.5
2,190,043	-		OHPLBJKB_02112	0.59	-0.9
2,190,059	+		OHPLBJKB_02112	0.60	-1.8
2,190,190	+		OHPLBJKB_02112	0.69	+0.1
2,190,278	+		OHPLBJKB_02112	0.75	+0.7
2,190,279	-		OHPLBJKB_02112	0.75	-2.0
2,190,286	+		OHPLBJKB_02112	0.75	+0.4
2,190,406	+		OHPLBJKB_02112	0.83	+0.6
2,190,468	-		OHPLBJKB_02112	0.87	-0.6
2,190,586	+				+0.1
2,190,587	-				+0.1
2,190,587	-				-0.4
2,190,588	+				-0.8
2,190,589	-				+0.9
2,190,653	-				+2.0
2,190,708	+				-0.2
2,190,709	-				-0.7
2,190,709	-				+1.8
2,190,711	-				-0.9
2,190,711	-				-0.9
2,190,718	+				+0.1
2,190,773	-				+0.9
2,190,852	-				-0.8
2,190,944	+		OHPLBJKB_02113	0.16	+0.0
2,190,950	+		OHPLBJKB_02113	0.16	-1.6
2,190,950	+		OHPLBJKB_02113	0.16	-2.2
2,190,950	+		OHPLBJKB_02113	0.16	+0.0
2,191,085	+		OHPLBJKB_02113	0.28	+0.8
2,191,093	+		OHPLBJKB_02113	0.28	+0.4
2,191,093	+		OHPLBJKB_02113	0.28	+1.2
2,191,093	+		OHPLBJKB_02113	0.28	-0.1
2,191,093	+		OHPLBJKB_02113	0.28	-0.7
2,191,093	+		OHPLBJKB_02113	0.28	-0.4
2,191,094	-		OHPLBJKB_02113	0.28	-1.4
2,191,094	-		OHPLBJKB_02113	0.28	-1.4
2,191,094	-		OHPLBJKB_02113	0.28	-0.4
2,191,094	-		OHPLBJKB_02113	0.28	-1.9
2,191,098	-		OHPLBJKB_02113	0.29	-1.7
2,191,329	+		OHPLBJKB_02113	0.48	+0.0
2,191,367	+		OHPLBJKB_02113	0.52	-2.2
2,191,409	+		OHPLBJKB_02113	0.55	-1.1
2,191,556	+		OHPLBJKB_02113	0.68	-0.1
2,191,556	+		OHPLBJKB_02113	0.68	-0.4
2,191,559	-		OHPLBJKB_02113	0.68	-1.3
2,191,563	-		OHPLBJKB_02113	0.68	+0.4
2,191,563	-		OHPLBJKB_02113	0.68	-1.2
2,191,586	+		OHPLBJKB_02113	0.70	-1.5
2,191,587	-		OHPLBJKB_02113	0.70	-1.0
2,191,671	+		OHPLBJKB_02113	0.78	-0.2
2,191,671	+		OHPLBJKB_02113	0.78	-1.1
2,191,674	+		OHPLBJKB_02113	0.78	-0.9
2,191,674	+		OHPLBJKB_02113	0.78	-0.7
2,191,675	-		OHPLBJKB_02113	0.78	-2.1
2,191,675	-		OHPLBJKB_02113	0.78	+1.5
2,191,903	+				-1.2
2,191,903	+				+0.6
2,191,904	-				-0.9
2,191,919	+				-0.8
2,191,920	-				-1.2
2,191,950	+				+0.1
2,191,997	+				-2.4
2,192,021	-				+0.0
2,192,023	+				+0.6
2,192,024	-				-2.8
2,192,024	-				+0.6
2,192,119	+				-0.2
2,192,119	+				-0.0
2,192,120	-				-0.6
2,192,120	-				+0.6
2,192,186	+				-1.7
2,192,194	-				-0.3
2,192,197	-				+0.5
2,192,224	+				+3.2
2,192,224	+				+0.4
2,192,312	+		OHPLBJKB_02114	0.11	-0.5
2,192,382	-		OHPLBJKB_02114	0.15	+0.2
2,192,385	+		OHPLBJKB_02114	0.15	+0.9
2,192,385	+		OHPLBJKB_02114	0.15	+0.8
2,192,385	+		OHPLBJKB_02114	0.15	-0.7
2,192,385	+		OHPLBJKB_02114	0.15	+0.1
2,192,385	+		OHPLBJKB_02114	0.15	-1.1
2,192,385	+		OHPLBJKB_02114	0.15	-0.3
2,192,386	-		OHPLBJKB_02114	0.15	+2.2
2,192,386	-		OHPLBJKB_02114	0.15	-1.0
2,192,386	-		OHPLBJKB_02114	0.15	+0.6
2,192,386	-		OHPLBJKB_02114	0.15	+0.2
2,192,408	+		OHPLBJKB_02114	0.17	+0.4
2,192,478	-		OHPLBJKB_02114	0.21	+0.6
2,192,538	+		OHPLBJKB_02114	0.25	-1.7
2,192,538	+		OHPLBJKB_02114	0.25	-0.0
2,192,539	-		OHPLBJKB_02114	0.25	-1.5
2,192,539	-		OHPLBJKB_02114	0.25	+0.2
2,192,547	+		OHPLBJKB_02114	0.25	+0.4
2,192,547	+		OHPLBJKB_02114	0.25	+0.8
2,192,547	+		OHPLBJKB_02114	0.25	+0.1
2,192,547	+		OHPLBJKB_02114	0.25	+0.8
2,192,548	-		OHPLBJKB_02114	0.25	-0.8
2,192,548	-		OHPLBJKB_02114	0.25	-0.9
2,192,548	-		OHPLBJKB_02114	0.25	-0.1
2,192,548	-		OHPLBJKB_02114	0.25	-0.1
2,192,549	+		OHPLBJKB_02114	0.25	-0.8
2,192,559	-		OHPLBJKB_02114	0.26	-0.7
2,192,591	+		OHPLBJKB_02114	0.28	-0.2
2,192,595	+		OHPLBJKB_02114	0.28	-0.2
2,192,595	+		OHPLBJKB_02114	0.28	-0.1
2,192,595	+		OHPLBJKB_02114	0.28	-0.3
2,192,595	+		OHPLBJKB_02114	0.28	-0.8
2,192,595	+		OHPLBJKB_02114	0.28	+1.0
2,192,596	-		OHPLBJKB_02114	0.28	+0.9
2,192,596	-		OHPLBJKB_02114	0.28	-1.2
2,192,596	-		OHPLBJKB_02114	0.28	+0.6
2,192,596	-		OHPLBJKB_02114	0.28	+0.6
2,192,596	-		OHPLBJKB_02114	0.28	+0.4
2,192,596	-		OHPLBJKB_02114	0.28	-0.6
2,192,596	-		OHPLBJKB_02114	0.28	-2.2
2,192,596	-		OHPLBJKB_02114	0.28	-0.9
2,192,596	-		OHPLBJKB_02114	0.28	+0.0
2,192,596	-		OHPLBJKB_02114	0.28	+1.0
2,192,597	+		OHPLBJKB_02114	0.28	-1.4
2,192,598	-		OHPLBJKB_02114	0.28	+0.2
2,192,598	-		OHPLBJKB_02114	0.28	-0.1
2,192,665	-		OHPLBJKB_02114	0.32	+0.2
2,192,712	+		OHPLBJKB_02114	0.35	-0.1
2,192,712	+		OHPLBJKB_02114	0.35	+0.5
2,192,712	+		OHPLBJKB_02114	0.35	+1.0
2,192,712	+		OHPLBJKB_02114	0.35	-1.0
2,192,712	+		OHPLBJKB_02114	0.35	+0.1
2,192,713	-		OHPLBJKB_02114	0.35	+0.1
2,192,713	-		OHPLBJKB_02114	0.35	-0.9
2,192,719	-		OHPLBJKB_02114	0.36	-0.2
2,192,741	-		OHPLBJKB_02114	0.37	-0.8
2,192,816	+		OHPLBJKB_02114	0.41	+0.4
2,192,816	+		OHPLBJKB_02114	0.41	-1.4
2,192,816	+		OHPLBJKB_02114	0.41	-0.6
2,192,817	-		OHPLBJKB_02114	0.42	-1.0
2,192,858	+		OHPLBJKB_02114	0.44	-0.6
2,192,859	-		OHPLBJKB_02114	0.44	-1.2
2,192,886	+		OHPLBJKB_02114	0.46	+0.2
2,192,886	+		OHPLBJKB_02114	0.46	+0.1
2,192,886	+		OHPLBJKB_02114	0.46	+1.0
2,192,889	+		OHPLBJKB_02114	0.46	-1.1
2,192,890	-		OHPLBJKB_02114	0.46	-0.3