Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01673

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
1,765,531	+		OHPLBJKB_01672	0.25	+0.2
1,765,532	-		OHPLBJKB_01672	0.25	+0.4
1,765,537	+		OHPLBJKB_01672	0.26	-1.5
1,765,537	+		OHPLBJKB_01672	0.26	-1.2
1,765,537	+		OHPLBJKB_01672	0.26	-1.5
1,765,538	-		OHPLBJKB_01672	0.26	-2.2
1,765,611	+		OHPLBJKB_01672	0.32	-3.2
1,765,624	+		OHPLBJKB_01672	0.34	+0.2
1,765,648	+		OHPLBJKB_01672	0.36	-0.9
1,765,648	+		OHPLBJKB_01672	0.36	-1.1
1,765,648	+		OHPLBJKB_01672	0.36	-0.9
1,765,648	+		OHPLBJKB_01672	0.36	-1.2
1,765,745	-		OHPLBJKB_01672	0.44	+1.2
1,765,792	+		OHPLBJKB_01672	0.48	-1.8
1,765,793	-		OHPLBJKB_01672	0.48	-0.6
1,765,795	-		OHPLBJKB_01672	0.48	-2.8
1,765,858	+		OHPLBJKB_01672	0.54	-2.1
1,765,865	+		OHPLBJKB_01672	0.55	-1.6
1,765,865	+		OHPLBJKB_01672	0.55	-0.8
1,765,865	+		OHPLBJKB_01672	0.55	-1.8
1,765,867	+		OHPLBJKB_01672	0.55	-1.7
1,765,867	+		OHPLBJKB_01672	0.55	+0.1
1,765,867	+		OHPLBJKB_01672	0.55	-1.5
1,765,867	+		OHPLBJKB_01672	0.55	-1.1
1,765,867	+		OHPLBJKB_01672	0.55	-1.4
1,765,868	-		OHPLBJKB_01672	0.55	-0.8
1,765,868	-		OHPLBJKB_01672	0.55	-0.8
1,765,868	-		OHPLBJKB_01672	0.55	-0.8
1,765,868	-		OHPLBJKB_01672	0.55	-1.3
1,765,868	-		OHPLBJKB_01672	0.55	-2.1
1,765,869	+		OHPLBJKB_01672	0.55	-1.3
1,765,869	+		OHPLBJKB_01672	0.55	-2.1
1,765,870	-		OHPLBJKB_01672	0.55	-0.0
1,766,050	+		OHPLBJKB_01672	0.71	+0.1
1,766,051	-		OHPLBJKB_01672	0.71	-1.8
1,766,132	+		OHPLBJKB_01672	0.78	-0.5
1,766,136	+		OHPLBJKB_01672	0.78	-0.6
1,766,136	+		OHPLBJKB_01672	0.78	-1.6
1,766,136	+		OHPLBJKB_01672	0.78	-0.9
1,766,137	-		OHPLBJKB_01672	0.78	-1.3
1,766,137	-		OHPLBJKB_01672	0.78	-1.0
1,766,137	-		OHPLBJKB_01672	0.78	-1.7
1,766,137	-		OHPLBJKB_01672	0.78	-0.6
1,766,137	-		OHPLBJKB_01672	0.78	-2.7
1,766,169	-		OHPLBJKB_01672	0.81	+0.4
1,766,171	+		OHPLBJKB_01672	0.81	-0.9
1,766,171	+		OHPLBJKB_01672	0.81	-1.6
1,766,171	+		OHPLBJKB_01672	0.81	-1.5
1,766,172	-		OHPLBJKB_01672	0.81	-2.0
1,766,172	-		OHPLBJKB_01672	0.81	+0.2
1,766,172	-		OHPLBJKB_01672	0.81	-2.1
1,766,240	+		OHPLBJKB_01672	0.87	-0.6
1,766,240	+		OHPLBJKB_01672	0.87	-2.1
1,766,240	+		OHPLBJKB_01672	0.87	-1.6
1,766,259	+		OHPLBJKB_01672	0.89	+1.2
1,766,259	+		OHPLBJKB_01672	0.89	-1.8
1,766,259	+		OHPLBJKB_01672	0.89	-0.1
1,766,260	-		OHPLBJKB_01672	0.89	+0.7
1,766,283	+				-1.8
1,766,350	-				-0.6
1,766,350	-				-1.3
1,766,350	-				-0.3
1,766,371	+				+0.7
1,766,372	-				-0.1
1,766,374	-				-1.1
1,766,374	-				-1.6
1,766,383	+				-0.0
1,766,383	+				-0.2
1,766,405	+				-0.5
1,766,406	-				-1.8
1,766,406	-				-0.6
1,766,413	+				-1.1
1,766,415	+				-1.9
1,766,416	-				+0.2
1,766,416	-				-1.2
1,766,422	+				-0.8
1,766,437	+				-0.0
1,766,437	+				-1.1
1,766,437	+				-1.0
1,766,438	-				-0.5
1,766,438	-				-1.9
1,766,438	-				-2.9
1,766,462	-				-1.9
1,766,462	-				-1.1
1,766,468	+				+0.2
1,766,469	-				-0.9
1,766,512	-		OHPLBJKB_01673	0.10	-0.3
1,766,569	+		OHPLBJKB_01673	0.16	-1.4
1,766,569	+		OHPLBJKB_01673	0.16	-1.2
1,766,570	-		OHPLBJKB_01673	0.16	+0.4
1,766,570	-		OHPLBJKB_01673	0.16	-1.2
1,766,571	+		OHPLBJKB_01673	0.16	-1.9
1,766,571	+		OHPLBJKB_01673	0.16	-1.0
1,766,571	+		OHPLBJKB_01673	0.16	+0.1
1,766,572	-		OHPLBJKB_01673	0.16	-0.9
1,766,574	+		OHPLBJKB_01673	0.16	-0.8
1,766,650	+		OHPLBJKB_01673	0.23	-1.5
1,766,691	+		OHPLBJKB_01673	0.27	-0.3
1,766,692	-		OHPLBJKB_01673	0.27	+0.7
1,766,692	-		OHPLBJKB_01673	0.27	-1.0
1,766,737	+		OHPLBJKB_01673	0.31	-0.2
1,766,738	-		OHPLBJKB_01673	0.31	-0.1
1,766,842	+		OHPLBJKB_01673	0.40	-1.1
1,766,842	+		OHPLBJKB_01673	0.40	-0.9
1,766,842	+		OHPLBJKB_01673	0.40	-1.1
1,766,842	+		OHPLBJKB_01673	0.40	-1.3
1,766,843	-		OHPLBJKB_01673	0.40	-0.6
1,767,005	-		OHPLBJKB_01673	0.55	-1.5
1,767,005	-		OHPLBJKB_01673	0.55	-1.0
1,767,005	-		OHPLBJKB_01673	0.55	-0.7
1,767,159	+		OHPLBJKB_01673	0.68	-1.6
1,767,159	+		OHPLBJKB_01673	0.68	-0.7
1,767,160	-		OHPLBJKB_01673	0.69	-1.2
1,767,163	+		OHPLBJKB_01673	0.69	+0.0
1,767,163	+		OHPLBJKB_01673	0.69	-1.8
1,767,164	-		OHPLBJKB_01673	0.69	-1.5
1,767,292	-		OHPLBJKB_01673	0.80	-1.8
1,767,292	-		OHPLBJKB_01673	0.80	-2.3
1,767,445	-				-0.6
1,767,456	+				-1.0
1,767,457	-				-0.1
1,767,457	-				+0.2
1,767,469	+				-0.3
1,767,469	+				-1.8
1,767,469	+				+0.1
1,767,470	-				-2.4
1,767,481	+				-1.1
1,767,481	+				+1.3
1,767,482	-				+0.2
1,767,486	+				+1.0
1,767,486	+				+0.4
1,767,486	+				-0.6
1,767,486	+				-1.5
1,767,487	-				-0.9
1,767,487	-				-0.5
1,767,487	-				-0.4
1,767,625	+		OHPLBJKB_01674	0.12	+0.2
1,767,626	-		OHPLBJKB_01674	0.13	-0.3
1,767,626	-		OHPLBJKB_01674	0.13	-0.7
1,767,626	-		OHPLBJKB_01674	0.13	-0.8
1,767,743	-		OHPLBJKB_01674	0.32	+0.7
1,767,757	+		OHPLBJKB_01674	0.34	-2.6
1,767,757	+		OHPLBJKB_01674	0.34	-0.6
1,767,758	-		OHPLBJKB_01674	0.34	-0.7
1,767,758	-		OHPLBJKB_01674	0.34	-1.4
1,767,811	+		OHPLBJKB_01674	0.43	-0.6
1,767,812	-		OHPLBJKB_01674	0.43	+0.8
1,767,987	-		OHPLBJKB_01674	0.72	-2.7
1,768,022	+		OHPLBJKB_01674	0.78	-1.2
1,768,049	+		OHPLBJKB_01674	0.82	+0.2
1,768,049	+		OHPLBJKB_01674	0.82	-1.5
1,768,049	+		OHPLBJKB_01674	0.82	+0.7
1,768,050	-		OHPLBJKB_01674	0.82	-0.2
1,768,052	-		OHPLBJKB_01674	0.83	+0.3
1,768,089	+		OHPLBJKB_01674	0.89	-2.6
1,768,153	-				+0.0
1,768,158	-				+0.2
1,768,189	-				-0.3
1,768,196	+				+0.7
1,768,196	+				-0.2
1,768,197	-				-0.6
1,768,205	-				-1.0
1,768,229	+		OHPLBJKB_01675	0.10	+0.2
1,768,359	-		OHPLBJKB_01675	0.27	+0.7
1,768,494	+		OHPLBJKB_01675	0.44	+0.0
1,768,509	+		OHPLBJKB_01675	0.46	-1.1
1,768,509	+		OHPLBJKB_01675	0.46	-0.3
1,768,509	+		OHPLBJKB_01675	0.46	+1.0
1,768,510	-		OHPLBJKB_01675	0.46	-0.7