Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01670

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
1,759,540	+		OHPLBJKB_01669	0.25	-1.8
1,759,540	+		OHPLBJKB_01669	0.25	-1.1
1,759,540	+		OHPLBJKB_01669	0.25	-1.7
1,759,540	+		OHPLBJKB_01669	0.25	-0.6
1,759,540	+		OHPLBJKB_01669	0.25	-1.4
1,759,540	+		OHPLBJKB_01669	0.25	-0.6
1,759,540	+		OHPLBJKB_01669	0.25	-2.0
1,759,540	+		OHPLBJKB_01669	0.25	-1.7
1,759,541	-		OHPLBJKB_01669	0.25	-1.8
1,759,541	-		OHPLBJKB_01669	0.25	-2.3
1,759,541	-		OHPLBJKB_01669	0.25	-1.0
1,759,542	+		OHPLBJKB_01669	0.25	-0.9
1,759,542	+		OHPLBJKB_01669	0.25	-0.1
1,759,542	+		OHPLBJKB_01669	0.25	-2.3
1,759,542	+		OHPLBJKB_01669	0.25	-0.9
1,759,542	+		OHPLBJKB_01669	0.25	-1.2
1,759,543	-		OHPLBJKB_01669	0.25	-1.7
1,759,543	-		OHPLBJKB_01669	0.25	+0.0
1,759,543	-		OHPLBJKB_01669	0.25	+0.7
1,759,543	-		OHPLBJKB_01669	0.25	-2.1
1,759,543	-		OHPLBJKB_01669	0.25	-2.6
1,759,543	-		OHPLBJKB_01669	0.25	-1.7
1,759,543	-		OHPLBJKB_01669	0.25	-0.3
1,759,627	+		OHPLBJKB_01669	0.31	-1.6
1,759,644	-		OHPLBJKB_01669	0.33	-0.7
1,759,651	+		OHPLBJKB_01669	0.33	-0.6
1,759,651	+		OHPLBJKB_01669	0.33	-2.6
1,759,652	-		OHPLBJKB_01669	0.33	-1.1
1,759,769	-		OHPLBJKB_01669	0.42	-0.3
1,759,769	-		OHPLBJKB_01669	0.42	-0.7
1,759,789	-		OHPLBJKB_01669	0.44	-0.9
1,759,881	+		OHPLBJKB_01669	0.51	+1.3
1,759,881	+		OHPLBJKB_01669	0.51	+0.7
1,759,888	-		OHPLBJKB_01669	0.52	-0.8
1,760,035	+		OHPLBJKB_01669	0.63	-1.9
1,760,036	-		OHPLBJKB_01669	0.63	-0.1
1,760,036	-		OHPLBJKB_01669	0.63	-0.3
1,760,243	+		OHPLBJKB_01669	0.79	-1.8
1,760,244	-		OHPLBJKB_01669	0.79	+0.3
1,760,331	+		OHPLBJKB_01669	0.86	-1.4
1,760,348	+		OHPLBJKB_01669	0.87	-0.3
1,760,349	-		OHPLBJKB_01669	0.87	-1.2
1,760,487	+				-1.4
1,760,488	-				-2.2
1,760,488	-				-0.7
1,760,499	+				-0.6
1,760,502	+				-2.0
1,760,502	+				+0.2
1,760,502	+				+0.7
1,760,503	-				+0.7
1,760,503	-				-0.2
1,760,539	+				-0.6
1,760,539	+				-2.8
1,760,548	-				+0.3
1,760,580	-				+0.1
1,760,588	-				-0.9
1,760,633	-				+0.0
1,760,633	-				+0.4
1,760,669	-				-0.3
1,760,795	-		OHPLBJKB_01670	0.12	+0.2
1,760,932	+		OHPLBJKB_01670	0.19	-0.9
1,760,933	-		OHPLBJKB_01670	0.19	-1.7
1,761,149	+		OHPLBJKB_01670	0.29	-0.7
1,761,150	-		OHPLBJKB_01670	0.29	-2.4
1,761,188	-		OHPLBJKB_01670	0.31	-0.5
1,761,221	+		OHPLBJKB_01670	0.32	-2.4
1,761,222	-		OHPLBJKB_01670	0.32	+0.4
1,761,245	-		OHPLBJKB_01670	0.33	-1.3
1,761,278	+		OHPLBJKB_01670	0.35	-0.7
1,761,279	-		OHPLBJKB_01670	0.35	+0.3
1,761,279	-		OHPLBJKB_01670	0.35	-1.8
1,761,279	-		OHPLBJKB_01670	0.35	-1.1
1,761,279	-		OHPLBJKB_01670	0.35	-0.2
1,761,282	+		OHPLBJKB_01670	0.35	-0.2
1,761,283	-		OHPLBJKB_01670	0.35	-0.6
1,761,283	-		OHPLBJKB_01670	0.35	-1.2
1,761,283	-		OHPLBJKB_01670	0.35	-1.7
1,761,283	-		OHPLBJKB_01670	0.35	-1.1
1,761,346	+		OHPLBJKB_01670	0.38	-1.4
1,761,370	-		OHPLBJKB_01670	0.39	+0.4
1,761,588	+		OHPLBJKB_01670	0.50	-2.0
1,761,588	+		OHPLBJKB_01670	0.50	-2.0
1,761,589	-		OHPLBJKB_01670	0.50	-2.6
1,761,589	-		OHPLBJKB_01670	0.50	+0.1
1,761,802	+		OHPLBJKB_01670	0.60	-1.8
1,761,802	+		OHPLBJKB_01670	0.60	-1.8
1,761,803	-		OHPLBJKB_01670	0.60	-0.3
1,761,812	+		OHPLBJKB_01670	0.60	+3.3
1,761,813	-		OHPLBJKB_01670	0.60	-0.7
1,762,215	+		OHPLBJKB_01670	0.79	-2.0
1,762,215	+		OHPLBJKB_01670	0.79	-1.7
1,762,257	+		OHPLBJKB_01670	0.81	-2.1
1,762,257	+		OHPLBJKB_01670	0.81	-2.1
1,762,257	+		OHPLBJKB_01670	0.81	-1.3
1,762,258	-		OHPLBJKB_01670	0.81	-0.1
1,762,258	-		OHPLBJKB_01670	0.81	-0.3
1,762,258	-		OHPLBJKB_01670	0.81	-0.2
1,762,341	-		OHPLBJKB_01670	0.85	-1.0
1,762,393	+		OHPLBJKB_01670	0.87	-1.1
1,762,393	+		OHPLBJKB_01670	0.87	-0.7
1,762,393	+		OHPLBJKB_01670	0.87	-2.1
1,762,394	-		OHPLBJKB_01670	0.87	+0.9
1,762,403	-		OHPLBJKB_01670	0.88	+1.3
1,762,455	+				+1.3
1,762,470	+				+0.7
1,762,471	-				+0.3
1,762,479	+				-1.2
1,762,483	+				-1.8
1,762,483	+				-2.3
1,762,484	-				-0.2
1,762,484	-				-1.6
1,762,518	-				-0.3
1,762,526	-				-0.4
1,762,612	-				-1.8
1,762,634	+				-1.3
1,762,654	+				-0.6
1,762,658	+				-0.1
1,762,659	-				-1.7
1,762,668	-				+1.1
1,762,677	-				-1.6
1,762,677	-				-0.2
1,762,712	+				-1.0
1,762,736	+				-2.3
1,762,791	-				+0.8
1,762,810	-				-0.1
1,762,872	-				-1.4
1,762,872	-				+0.2
1,762,997	+		OHPLBJKB_01671	0.13	-0.5
1,763,001	-		OHPLBJKB_01671	0.13	-1.8
1,763,001	-		OHPLBJKB_01671	0.13	-0.4
1,763,018	+		OHPLBJKB_01671	0.14	-2.3
1,763,028	+		OHPLBJKB_01671	0.14	-3.0
1,763,028	+		OHPLBJKB_01671	0.14	-1.1
1,763,028	+		OHPLBJKB_01671	0.14	-0.6
1,763,028	+		OHPLBJKB_01671	0.14	-0.3
1,763,028	+		OHPLBJKB_01671	0.14	-2.9
1,763,028	+		OHPLBJKB_01671	0.14	-1.7
1,763,028	+		OHPLBJKB_01671	0.14	-1.8
1,763,029	-		OHPLBJKB_01671	0.14	-1.5
1,763,029	-		OHPLBJKB_01671	0.14	-1.7
1,763,029	-		OHPLBJKB_01671	0.14	-0.3
1,763,029	-		OHPLBJKB_01671	0.14	-0.2
1,763,029	-		OHPLBJKB_01671	0.14	-1.2
1,763,030	+		OHPLBJKB_01671	0.14	-0.4
1,763,030	+		OHPLBJKB_01671	0.14	+1.4
1,763,077	+		OHPLBJKB_01671	0.16	+0.4
1,763,105	+		OHPLBJKB_01671	0.17	-1.1
1,763,106	-		OHPLBJKB_01671	0.17	-1.3
1,763,145	+		OHPLBJKB_01671	0.19	+0.4
1,763,145	+		OHPLBJKB_01671	0.19	-1.8
1,763,146	-		OHPLBJKB_01671	0.19	-1.9
1,763,153	+		OHPLBJKB_01671	0.19	+0.0
1,763,153	+		OHPLBJKB_01671	0.19	-0.6
1,763,153	+		OHPLBJKB_01671	0.19	-3.5
1,763,154	-		OHPLBJKB_01671	0.19	-2.1
1,763,154	-		OHPLBJKB_01671	0.19	-0.8
1,763,226	+		OHPLBJKB_01671	0.22	-3.1
1,763,312	+		OHPLBJKB_01671	0.25	-0.5
1,763,334	+		OHPLBJKB_01671	0.26	-1.0
1,763,463	+		OHPLBJKB_01671	0.31	-0.1
1,763,464	-		OHPLBJKB_01671	0.31	-2.1
1,763,465	+		OHPLBJKB_01671	0.31	+0.7
1,763,514	+		OHPLBJKB_01671	0.33	-0.6
1,763,514	+		OHPLBJKB_01671	0.33	-0.8
1,763,514	+		OHPLBJKB_01671	0.33	+0.2
1,763,514	+		OHPLBJKB_01671	0.33	-1.1
1,763,538	-		OHPLBJKB_01671	0.34	-1.0
1,763,544	-		OHPLBJKB_01671	0.35	-1.5