Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01669

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
1,758,286	-		OHPLBJKB_01667	0.90	-1.7
1,758,317	+				-3.1
1,758,318	-				-1.1
1,758,407	-				-1.9
1,758,446	+				-0.7
1,758,446	+				-0.7
1,758,447	-				-1.3
1,758,447	-				-0.1
1,758,466	+				-0.7
1,758,467	-				-0.6
1,758,565	+		OHPLBJKB_01668	0.17	-1.6
1,758,565	+		OHPLBJKB_01668	0.17	-0.7
1,758,565	+		OHPLBJKB_01668	0.17	-1.3
1,758,565	+		OHPLBJKB_01668	0.17	-0.3
1,758,566	-		OHPLBJKB_01668	0.17	-1.2
1,758,566	-		OHPLBJKB_01668	0.17	-2.9
1,758,566	-		OHPLBJKB_01668	0.17	-3.1
1,758,566	-		OHPLBJKB_01668	0.17	-1.8
1,758,566	-		OHPLBJKB_01668	0.17	-2.6
1,758,566	-		OHPLBJKB_01668	0.17	+0.1
1,758,566	-		OHPLBJKB_01668	0.17	-0.5
1,758,626	+		OHPLBJKB_01668	0.25	-0.3
1,758,627	-		OHPLBJKB_01668	0.25	-1.0
1,758,635	+		OHPLBJKB_01668	0.26	+0.7
1,758,635	+		OHPLBJKB_01668	0.26	-0.9
1,758,635	+		OHPLBJKB_01668	0.26	+1.3
1,758,635	+		OHPLBJKB_01668	0.26	-1.4
1,758,635	+		OHPLBJKB_01668	0.26	-0.3
1,758,635	+		OHPLBJKB_01668	0.26	-1.5
1,758,635	+		OHPLBJKB_01668	0.26	-0.3
1,758,636	-		OHPLBJKB_01668	0.26	+0.7
1,758,636	-		OHPLBJKB_01668	0.26	-0.9
1,758,636	-		OHPLBJKB_01668	0.26	-2.0
1,758,636	-		OHPLBJKB_01668	0.26	-1.7
1,758,636	-		OHPLBJKB_01668	0.26	-0.8
1,758,636	-		OHPLBJKB_01668	0.26	-1.4
1,758,636	-		OHPLBJKB_01668	0.26	-0.1
1,758,636	-		OHPLBJKB_01668	0.26	-2.1
1,758,655	-		OHPLBJKB_01668	0.28	-2.4
1,758,655	-		OHPLBJKB_01668	0.28	-1.9
1,758,719	-		OHPLBJKB_01668	0.37	-0.7
1,758,719	-		OHPLBJKB_01668	0.37	-0.1
1,758,724	+		OHPLBJKB_01668	0.37	-1.3
1,758,781	+		OHPLBJKB_01668	0.45	-0.1
1,758,781	+		OHPLBJKB_01668	0.45	-1.1
1,758,781	+		OHPLBJKB_01668	0.45	-0.5
1,758,782	-		OHPLBJKB_01668	0.45	-2.4
1,758,924	+		OHPLBJKB_01668	0.63	-0.5
1,758,965	-		OHPLBJKB_01668	0.68	-2.3
1,759,004	+		OHPLBJKB_01668	0.73	-1.4
1,759,005	-		OHPLBJKB_01668	0.73	-0.5
1,759,009	-		OHPLBJKB_01668	0.74	-2.3
1,759,049	+		OHPLBJKB_01668	0.79	-1.3
1,759,049	+		OHPLBJKB_01668	0.79	-0.7
1,759,052	-		OHPLBJKB_01668	0.79	-2.1
1,759,112	-		OHPLBJKB_01668	0.87	-1.8
1,759,214	+				-0.3
1,759,252	+				-1.1
1,759,252	+				-0.1
1,759,253	-				-1.3
1,759,254	+				-0.1
1,759,254	+				-0.1
1,759,255	-				-0.5
1,759,255	-				-0.3
1,759,255	-				-1.3
1,759,258	+				-2.6
1,759,259	-				+0.7
1,759,259	-				-0.9
1,759,259	-				-0.7
1,759,269	+				-0.9
1,759,309	-				-2.7
1,759,404	+		OHPLBJKB_01669	0.14	-2.1
1,759,405	-		OHPLBJKB_01669	0.14	-0.1
1,759,540	+		OHPLBJKB_01669	0.25	-1.8
1,759,540	+		OHPLBJKB_01669	0.25	-1.1
1,759,540	+		OHPLBJKB_01669	0.25	-1.7
1,759,540	+		OHPLBJKB_01669	0.25	-0.6
1,759,540	+		OHPLBJKB_01669	0.25	-1.4
1,759,540	+		OHPLBJKB_01669	0.25	-0.6
1,759,540	+		OHPLBJKB_01669	0.25	-2.0
1,759,540	+		OHPLBJKB_01669	0.25	-1.7
1,759,541	-		OHPLBJKB_01669	0.25	-1.8
1,759,541	-		OHPLBJKB_01669	0.25	-2.3
1,759,541	-		OHPLBJKB_01669	0.25	-1.0
1,759,542	+		OHPLBJKB_01669	0.25	-0.9
1,759,542	+		OHPLBJKB_01669	0.25	-0.1
1,759,542	+		OHPLBJKB_01669	0.25	-2.3
1,759,542	+		OHPLBJKB_01669	0.25	-0.9
1,759,542	+		OHPLBJKB_01669	0.25	-1.2
1,759,543	-		OHPLBJKB_01669	0.25	-1.7
1,759,543	-		OHPLBJKB_01669	0.25	+0.0
1,759,543	-		OHPLBJKB_01669	0.25	+0.7
1,759,543	-		OHPLBJKB_01669	0.25	-2.1
1,759,543	-		OHPLBJKB_01669	0.25	-2.6
1,759,543	-		OHPLBJKB_01669	0.25	-1.7
1,759,543	-		OHPLBJKB_01669	0.25	-0.3
1,759,627	+		OHPLBJKB_01669	0.31	-1.6
1,759,644	-		OHPLBJKB_01669	0.33	-0.7
1,759,651	+		OHPLBJKB_01669	0.33	-0.6
1,759,651	+		OHPLBJKB_01669	0.33	-2.6
1,759,652	-		OHPLBJKB_01669	0.33	-1.1
1,759,769	-		OHPLBJKB_01669	0.42	-0.3
1,759,769	-		OHPLBJKB_01669	0.42	-0.7
1,759,789	-		OHPLBJKB_01669	0.44	-0.9
1,759,881	+		OHPLBJKB_01669	0.51	+1.3
1,759,881	+		OHPLBJKB_01669	0.51	+0.7
1,759,888	-		OHPLBJKB_01669	0.52	-0.8
1,760,035	+		OHPLBJKB_01669	0.63	-1.9
1,760,036	-		OHPLBJKB_01669	0.63	-0.1
1,760,036	-		OHPLBJKB_01669	0.63	-0.3
1,760,243	+		OHPLBJKB_01669	0.79	-1.8
1,760,244	-		OHPLBJKB_01669	0.79	+0.3
1,760,331	+		OHPLBJKB_01669	0.86	-1.4
1,760,348	+		OHPLBJKB_01669	0.87	-0.3
1,760,349	-		OHPLBJKB_01669	0.87	-1.2
1,760,487	+				-1.4
1,760,488	-				-2.2
1,760,488	-				-0.7
1,760,499	+				-0.6
1,760,502	+				-2.0
1,760,502	+				+0.2
1,760,502	+				+0.7
1,760,503	-				+0.7
1,760,503	-				-0.2
1,760,539	+				-0.6
1,760,539	+				-2.8
1,760,548	-				+0.3
1,760,580	-				+0.1
1,760,588	-				-0.9
1,760,633	-				+0.0
1,760,633	-				+0.4
1,760,669	-				-0.3
1,760,795	-		OHPLBJKB_01670	0.12	+0.2
1,760,932	+		OHPLBJKB_01670	0.19	-0.9
1,760,933	-		OHPLBJKB_01670	0.19	-1.7
1,761,149	+		OHPLBJKB_01670	0.29	-0.7
1,761,150	-		OHPLBJKB_01670	0.29	-2.4
1,761,188	-		OHPLBJKB_01670	0.31	-0.5
1,761,221	+		OHPLBJKB_01670	0.32	-2.4
1,761,222	-		OHPLBJKB_01670	0.32	+0.4
1,761,245	-		OHPLBJKB_01670	0.33	-1.3
1,761,278	+		OHPLBJKB_01670	0.35	-0.7
1,761,279	-		OHPLBJKB_01670	0.35	+0.3
1,761,279	-		OHPLBJKB_01670	0.35	-1.8
1,761,279	-		OHPLBJKB_01670	0.35	-1.1
1,761,279	-		OHPLBJKB_01670	0.35	-0.2
1,761,282	+		OHPLBJKB_01670	0.35	-0.2
1,761,283	-		OHPLBJKB_01670	0.35	-0.6
1,761,283	-		OHPLBJKB_01670	0.35	-1.2
1,761,283	-		OHPLBJKB_01670	0.35	-1.7
1,761,283	-		OHPLBJKB_01670	0.35	-1.1
1,761,346	+		OHPLBJKB_01670	0.38	-1.4
1,761,370	-		OHPLBJKB_01670	0.39	+0.4