Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01578

Experiment: vio MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI10
1,645,314	+		OHPLBJKB_01577	0.57	-0.1
1,645,316	+		OHPLBJKB_01577	0.58	+1.4
1,645,361	+		OHPLBJKB_01577	0.60	-0.1
1,645,361	+		OHPLBJKB_01577	0.60	+0.9
1,645,361	+		OHPLBJKB_01577	0.60	+0.1
1,645,362	-		OHPLBJKB_01577	0.60	-0.1
1,645,362	-		OHPLBJKB_01577	0.60	-0.1
1,645,362	-		OHPLBJKB_01577	0.60	-0.2
1,645,362	-		OHPLBJKB_01577	0.60	-0.9
1,645,362	-		OHPLBJKB_01577	0.60	-0.5
1,645,362	-		OHPLBJKB_01577	0.60	-0.3
1,645,362	-		OHPLBJKB_01577	0.60	+0.2
1,645,368	-		OHPLBJKB_01577	0.61	-0.0
1,645,507	+		OHPLBJKB_01577	0.69	+0.7
1,645,507	+		OHPLBJKB_01577	0.69	-0.2
1,645,536	-		OHPLBJKB_01577	0.70	-0.9
1,645,536	-		OHPLBJKB_01577	0.70	-1.9
1,645,604	-		OHPLBJKB_01577	0.74	-0.1
1,645,606	-		OHPLBJKB_01577	0.74	-0.3
1,645,810	-		OHPLBJKB_01577	0.86	-0.9
1,646,016	+				+1.7
1,646,016	+				-1.2
1,646,016	+				+0.0
1,646,017	-				+0.9
1,646,019	+				-0.5
1,646,020	-				+0.6
1,646,081	+				-0.1
1,646,086	+				+0.4
1,646,096	+				-0.8
1,646,096	+				+1.0
1,646,097	-				-0.3
1,646,138	-				+0.2
1,646,567	-		OHPLBJKB_01578	0.13	+0.3
1,646,668	+		OHPLBJKB_01578	0.18	+0.8
1,646,669	-		OHPLBJKB_01578	0.18	+1.0
1,646,769	+		OHPLBJKB_01578	0.22	-1.1
1,646,769	+		OHPLBJKB_01578	0.22	+1.1
1,646,770	-		OHPLBJKB_01578	0.22	+1.3
1,646,770	-		OHPLBJKB_01578	0.22	+0.4
1,646,770	-		OHPLBJKB_01578	0.22	-0.2
1,646,770	-		OHPLBJKB_01578	0.22	+0.4
1,646,773	+		OHPLBJKB_01578	0.22	+0.0
1,646,773	+		OHPLBJKB_01578	0.22	+1.3
1,646,773	+		OHPLBJKB_01578	0.22	+0.2
1,646,773	+		OHPLBJKB_01578	0.22	-0.7
1,646,773	+		OHPLBJKB_01578	0.22	+0.6
1,646,773	+		OHPLBJKB_01578	0.22	-0.7
1,646,774	-		OHPLBJKB_01578	0.22	-0.0
1,646,774	-		OHPLBJKB_01578	0.22	-0.1
1,646,774	-		OHPLBJKB_01578	0.22	+0.5
1,646,774	-		OHPLBJKB_01578	0.22	+0.7
1,646,902	+		OHPLBJKB_01578	0.28	-0.5
1,646,902	+		OHPLBJKB_01578	0.28	+0.0
1,646,903	-		OHPLBJKB_01578	0.28	-0.6
1,646,903	-		OHPLBJKB_01578	0.28	+0.6
1,646,917	-		OHPLBJKB_01578	0.29	-0.1
1,646,937	+		OHPLBJKB_01578	0.29	-0.7
1,646,944	+		OHPLBJKB_01578	0.30	+2.9
1,646,944	+		OHPLBJKB_01578	0.30	+1.3
1,646,944	+		OHPLBJKB_01578	0.30	-1.0
1,646,945	-		OHPLBJKB_01578	0.30	+0.5
1,646,947	-		OHPLBJKB_01578	0.30	-0.3
1,646,947	-		OHPLBJKB_01578	0.30	-1.4
1,646,947	-		OHPLBJKB_01578	0.30	-0.1
1,646,957	-		OHPLBJKB_01578	0.30	+0.2
1,647,123	+		OHPLBJKB_01578	0.38	+1.4
1,647,124	-		OHPLBJKB_01578	0.38	-0.3
1,647,209	-		OHPLBJKB_01578	0.41	+0.2
1,647,217	+		OHPLBJKB_01578	0.42	+0.1
1,647,218	-		OHPLBJKB_01578	0.42	+0.0
1,647,218	-		OHPLBJKB_01578	0.42	+0.8
1,647,234	+		OHPLBJKB_01578	0.43	+0.2
1,647,284	+		OHPLBJKB_01578	0.45	+0.9
1,647,284	+		OHPLBJKB_01578	0.45	-0.2
1,647,285	-		OHPLBJKB_01578	0.45	-1.1
1,647,294	+		OHPLBJKB_01578	0.45	-0.0
1,647,294	+		OHPLBJKB_01578	0.45	-1.3
1,647,295	-		OHPLBJKB_01578	0.45	-0.8
1,647,295	-		OHPLBJKB_01578	0.45	+0.4
1,647,295	-		OHPLBJKB_01578	0.45	-0.9
1,647,295	-		OHPLBJKB_01578	0.45	-1.4
1,647,299	-		OHPLBJKB_01578	0.45	-0.7
1,647,299	-		OHPLBJKB_01578	0.45	-0.4
1,647,299	-		OHPLBJKB_01578	0.45	-0.8
1,647,303	+		OHPLBJKB_01578	0.46	-0.9
1,647,326	-		OHPLBJKB_01578	0.47	-2.1
1,647,610	+		OHPLBJKB_01578	0.59	-0.5
1,647,611	-		OHPLBJKB_01578	0.59	+1.1
1,647,611	-		OHPLBJKB_01578	0.59	-1.2
1,647,611	-		OHPLBJKB_01578	0.59	+1.1
1,647,668	-		OHPLBJKB_01578	0.62	-0.1
1,647,761	+		OHPLBJKB_01578	0.66	+0.8
1,647,762	-		OHPLBJKB_01578	0.66	+0.5
1,647,762	-		OHPLBJKB_01578	0.66	-0.3
1,647,885	+		OHPLBJKB_01578	0.71	-0.7
1,647,885	+		OHPLBJKB_01578	0.71	-1.2
1,647,886	-		OHPLBJKB_01578	0.71	-0.3
1,648,003	+		OHPLBJKB_01578	0.76	+0.9
1,648,004	-		OHPLBJKB_01578	0.76	-0.2
1,648,063	+		OHPLBJKB_01578	0.79	+0.4
1,648,064	-		OHPLBJKB_01578	0.79	-0.9
1,648,064	-		OHPLBJKB_01578	0.79	-0.3
1,648,066	+		OHPLBJKB_01578	0.79	-0.2
1,648,067	-		OHPLBJKB_01578	0.79	+0.4
1,648,067	-		OHPLBJKB_01578	0.79	+0.0
1,648,094	-		OHPLBJKB_01578	0.80	+0.6
1,648,094	-		OHPLBJKB_01578	0.80	-2.6
1,648,118	-		OHPLBJKB_01578	0.82	+0.9
1,648,180	+		OHPLBJKB_01578	0.84	-0.5
1,648,180	+		OHPLBJKB_01578	0.84	+0.5
1,648,181	-		OHPLBJKB_01578	0.84	+0.0
1,648,181	-		OHPLBJKB_01578	0.84	+2.8
1,648,181	-		OHPLBJKB_01578	0.84	-0.9
1,648,181	-		OHPLBJKB_01578	0.84	-1.3
1,648,306	+		OHPLBJKB_01578	0.90	-1.0
1,648,306	+		OHPLBJKB_01578	0.90	+0.5
1,648,307	-		OHPLBJKB_01578	0.90	+0.3
1,648,307	-		OHPLBJKB_01578	0.90	-0.4
1,648,453	+				+0.8
1,648,454	-				+0.1
1,648,509	+				-0.1
1,648,583	-				-0.6
1,648,672	+				+0.1
1,648,672	+				+0.1
1,648,673	-				-1.3
1,648,676	+				-0.6
1,648,677	-				+1.9
1,648,677	-				+0.1
1,648,681	-				-1.5
1,648,681	-				+0.1
1,648,734	+				+0.3
1,648,735	-				+0.3
1,648,747	+				-1.6
1,648,747	+				+0.3
1,648,913	+		OHPLBJKB_01579	0.14	-0.7
1,648,914	-		OHPLBJKB_01579	0.14	-2.0
1,648,959	-		OHPLBJKB_01579	0.19	+0.8
1,649,019	-		OHPLBJKB_01579	0.25	-0.3
1,649,019	-		OHPLBJKB_01579	0.25	+0.4
1,649,031	+		OHPLBJKB_01579	0.26	+1.2
1,649,031	+		OHPLBJKB_01579	0.26	+0.1
1,649,168	+		OHPLBJKB_01579	0.41	-0.1
1,649,169	-		OHPLBJKB_01579	0.42	-0.3
1,649,169	-		OHPLBJKB_01579	0.42	-0.3
1,649,511	-		OHPLBJKB_01579	0.79	+0.6
1,649,511	-		OHPLBJKB_01579	0.79	-0.2
1,649,511	-		OHPLBJKB_01579	0.79	-0.7
1,649,511	-		OHPLBJKB_01579	0.79	+0.0
1,649,511	-		OHPLBJKB_01579	0.79	-0.7
1,649,514	+		OHPLBJKB_01579	0.79	-0.9
1,649,515	-		OHPLBJKB_01579	0.79	+0.2
1,649,515	-		OHPLBJKB_01579	0.79	+0.4