Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02715

Experiment: bur MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02713 and OHPLBJKB_02714 are separated by 255 nucleotidesOHPLBJKB_02714 and OHPLBJKB_02715 overlap by 4 nucleotidesOHPLBJKB_02715 and OHPLBJKB_02716 are separated by 4 nucleotides OHPLBJKB_02713: OHPLBJKB_02713 - Ribosome modulation factor, at 2,825,143 to 2,825,310 _02713 OHPLBJKB_02714: OHPLBJKB_02714 - hypothetical protein, at 2,825,566 to 2,826,129 _02714 OHPLBJKB_02715: OHPLBJKB_02715 - Paraquat-inducible protein B, at 2,826,126 to 2,827,766 _02715 OHPLBJKB_02716: OHPLBJKB_02716 - Paraquat-inducible protein A, at 2,827,771 to 2,829,024 _02716 Position (kb) 2826 2827 2828Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2825.153 kb on - strandat 2825.153 kb on - strandat 2825.153 kb on - strandat 2825.326 kb on + strandat 2825.380 kb on - strandat 2825.436 kb on - strandat 2825.466 kb on - strandat 2825.504 kb on - strandat 2825.547 kb on + strandat 2825.564 kb on - strandat 2825.582 kb on - strandat 2825.582 kb on - strandat 2825.596 kb on - strandat 2825.648 kb on + strand, within OHPLBJKB_02714at 2825.918 kb on + strand, within OHPLBJKB_02714at 2825.918 kb on + strand, within OHPLBJKB_02714at 2825.963 kb on + strand, within OHPLBJKB_02714at 2825.992 kb on + strand, within OHPLBJKB_02714at 2826.046 kb on + strand, within OHPLBJKB_02714at 2826.056 kb on + strand, within OHPLBJKB_02714at 2826.056 kb on + strand, within OHPLBJKB_02714at 2826.057 kb on - strand, within OHPLBJKB_02714at 2826.177 kb on + strandat 2826.177 kb on + strandat 2826.255 kb on - strandat 2826.389 kb on + strand, within OHPLBJKB_02715at 2826.564 kb on - strand, within OHPLBJKB_02715at 2826.576 kb on - strand, within OHPLBJKB_02715at 2826.594 kb on - strand, within OHPLBJKB_02715at 2826.619 kb on + strand, within OHPLBJKB_02715at 2826.619 kb on + strand, within OHPLBJKB_02715at 2826.619 kb on + strand, within OHPLBJKB_02715at 2826.620 kb on - strand, within OHPLBJKB_02715at 2826.620 kb on - strand, within OHPLBJKB_02715at 2826.620 kb on - strand, within OHPLBJKB_02715at 2826.764 kb on + strand, within OHPLBJKB_02715at 2826.780 kb on - strand, within OHPLBJKB_02715at 2826.794 kb on + strand, within OHPLBJKB_02715at 2826.840 kb on - strand, within OHPLBJKB_02715at 2826.922 kb on + strand, within OHPLBJKB_02715at 2827.144 kb on + strand, within OHPLBJKB_02715at 2827.144 kb on + strand, within OHPLBJKB_02715at 2827.169 kb on - strand, within OHPLBJKB_02715at 2827.175 kb on + strand, within OHPLBJKB_02715at 2827.342 kb on + strand, within OHPLBJKB_02715at 2827.343 kb on - strand, within OHPLBJKB_02715at 2827.343 kb on - strand, within OHPLBJKB_02715at 2827.388 kb on - strand, within OHPLBJKB_02715at 2827.388 kb on - strand, within OHPLBJKB_02715at 2827.388 kb on - strand, within OHPLBJKB_02715at 2827.469 kb on + strand, within OHPLBJKB_02715at 2827.470 kb on - strand, within OHPLBJKB_02715at 2827.580 kb on + strand, within OHPLBJKB_02715at 2827.580 kb on + strand, within OHPLBJKB_02715at 2827.581 kb on - strand, within OHPLBJKB_02715at 2827.833 kb on + strandat 2827.834 kb on - strandat 2827.853 kb on - strandat 2827.893 kb on - strandat 2827.896 kb on + strandat 2827.896 kb on + strandat 2827.897 kb on - strand, within OHPLBJKB_02716at 2827.897 kb on - strand, within OHPLBJKB_02716at 2827.992 kb on - strand, within OHPLBJKB_02716at 2828.085 kb on + strand, within OHPLBJKB_02716at 2828.086 kb on - strand, within OHPLBJKB_02716at 2828.086 kb on - strand, within OHPLBJKB_02716at 2828.088 kb on + strand, within OHPLBJKB_02716at 2828.089 kb on - strand, within OHPLBJKB_02716at 2828.089 kb on - strand, within OHPLBJKB_02716at 2828.089 kb on - strand, within OHPLBJKB_02716at 2828.089 kb on - strand, within OHPLBJKB_02716at 2828.182 kb on + strand, within OHPLBJKB_02716at 2828.185 kb on + strand, within OHPLBJKB_02716at 2828.185 kb on + strand, within OHPLBJKB_02716at 2828.185 kb on + strand, within OHPLBJKB_02716at 2828.298 kb on + strand, within OHPLBJKB_02716at 2828.302 kb on - strand, within OHPLBJKB_02716at 2828.374 kb on + strand, within OHPLBJKB_02716at 2828.375 kb on - strand, within OHPLBJKB_02716at 2828.532 kb on - strand, within OHPLBJKB_02716

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI1
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2,825,153 - +1.3
2,825,153 - +0.1
2,825,153 - -2.9
2,825,326 + -0.8
2,825,380 - +0.1
2,825,436 - +2.2
2,825,466 - +0.2
2,825,504 - +1.5
2,825,547 + -0.2
2,825,564 - -0.1
2,825,582 - -0.6
2,825,582 - +1.2
2,825,596 - -2.5
2,825,648 + OHPLBJKB_02714 0.15 -0.9
2,825,918 + OHPLBJKB_02714 0.62 -1.2
2,825,918 + OHPLBJKB_02714 0.62 -0.4
2,825,963 + OHPLBJKB_02714 0.70 +1.6
2,825,992 + OHPLBJKB_02714 0.76 +0.7
2,826,046 + OHPLBJKB_02714 0.85 -0.9
2,826,056 + OHPLBJKB_02714 0.87 +1.6
2,826,056 + OHPLBJKB_02714 0.87 -0.8
2,826,057 - OHPLBJKB_02714 0.87 +0.1
2,826,177 + -0.4
2,826,177 + +0.2
2,826,255 - +2.1
2,826,389 + OHPLBJKB_02715 0.16 -0.4
2,826,564 - OHPLBJKB_02715 0.27 +1.1
2,826,576 - OHPLBJKB_02715 0.27 -0.4
2,826,594 - OHPLBJKB_02715 0.29 +0.8
2,826,619 + OHPLBJKB_02715 0.30 +0.2
2,826,619 + OHPLBJKB_02715 0.30 +1.0
2,826,619 + OHPLBJKB_02715 0.30 -1.0
2,826,620 - OHPLBJKB_02715 0.30 -0.5
2,826,620 - OHPLBJKB_02715 0.30 +0.9
2,826,620 - OHPLBJKB_02715 0.30 +1.0
2,826,764 + OHPLBJKB_02715 0.39 +0.4
2,826,780 - OHPLBJKB_02715 0.40 -1.0
2,826,794 + OHPLBJKB_02715 0.41 +0.6
2,826,840 - OHPLBJKB_02715 0.44 -1.0
2,826,922 + OHPLBJKB_02715 0.49 -0.0
2,827,144 + OHPLBJKB_02715 0.62 -0.6
2,827,144 + OHPLBJKB_02715 0.62 -0.0
2,827,169 - OHPLBJKB_02715 0.64 +0.2
2,827,175 + OHPLBJKB_02715 0.64 -0.0
2,827,342 + OHPLBJKB_02715 0.74 -0.4
2,827,343 - OHPLBJKB_02715 0.74 -1.4
2,827,343 - OHPLBJKB_02715 0.74 -1.5
2,827,388 - OHPLBJKB_02715 0.77 -0.8
2,827,388 - OHPLBJKB_02715 0.77 -0.2
2,827,388 - OHPLBJKB_02715 0.77 +1.1
2,827,469 + OHPLBJKB_02715 0.82 -0.6
2,827,470 - OHPLBJKB_02715 0.82 -0.2
2,827,580 + OHPLBJKB_02715 0.89 +2.3
2,827,580 + OHPLBJKB_02715 0.89 +0.7
2,827,581 - OHPLBJKB_02715 0.89 -1.7
2,827,833 + -0.0
2,827,834 - +2.2
2,827,853 - -2.5
2,827,893 - -0.6
2,827,896 + -0.0
2,827,896 + -1.0
2,827,897 - OHPLBJKB_02716 0.10 -2.3
2,827,897 - OHPLBJKB_02716 0.10 +0.2
2,827,992 - OHPLBJKB_02716 0.18 +0.2
2,828,085 + OHPLBJKB_02716 0.25 +1.3
2,828,086 - OHPLBJKB_02716 0.25 +0.6
2,828,086 - OHPLBJKB_02716 0.25 -1.9
2,828,088 + OHPLBJKB_02716 0.25 +1.0
2,828,089 - OHPLBJKB_02716 0.25 -0.9
2,828,089 - OHPLBJKB_02716 0.25 -0.4
2,828,089 - OHPLBJKB_02716 0.25 -0.9
2,828,089 - OHPLBJKB_02716 0.25 +1.0
2,828,182 + OHPLBJKB_02716 0.33 -1.3
2,828,185 + OHPLBJKB_02716 0.33 -1.3
2,828,185 + OHPLBJKB_02716 0.33 +1.2
2,828,185 + OHPLBJKB_02716 0.33 -0.1
2,828,298 + OHPLBJKB_02716 0.42 -2.3
2,828,302 - OHPLBJKB_02716 0.42 -1.4
2,828,374 + OHPLBJKB_02716 0.48 -0.2
2,828,375 - OHPLBJKB_02716 0.48 -0.9
2,828,532 - OHPLBJKB_02716 0.61 +1.3

Or see this region's nucleotide sequence