Experiment: bur MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02704 and OHPLBJKB_02705 are separated by 122 nucleotides OHPLBJKB_02705 and OHPLBJKB_02706 are separated by 9 nucleotides
OHPLBJKB_02704: OHPLBJKB_02704 - DNA helicase IV, at 2,814,500 to 2,816,554
_02704
OHPLBJKB_02705: OHPLBJKB_02705 - Inner membrane protein YccF, at 2,816,677 to 2,817,123
_02705
OHPLBJKB_02706: OHPLBJKB_02706 - Inner membrane protein YccS, at 2,817,133 to 2,819,295
_02706
Position (kb)
2816
2817
2818 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 2815.708 kb on + strand, within OHPLBJKB_02704 at 2815.712 kb on - strand, within OHPLBJKB_02704 at 2815.712 kb on - strand, within OHPLBJKB_02704 at 2815.712 kb on - strand, within OHPLBJKB_02704 at 2815.756 kb on + strand, within OHPLBJKB_02704 at 2815.757 kb on - strand, within OHPLBJKB_02704 at 2815.917 kb on - strand, within OHPLBJKB_02704 at 2816.024 kb on - strand, within OHPLBJKB_02704 at 2816.025 kb on + strand, within OHPLBJKB_02704 at 2816.025 kb on + strand, within OHPLBJKB_02704 at 2816.025 kb on + strand, within OHPLBJKB_02704 at 2816.026 kb on - strand, within OHPLBJKB_02704 at 2816.026 kb on - strand, within OHPLBJKB_02704 at 2816.026 kb on - strand, within OHPLBJKB_02704 at 2816.035 kb on + strand, within OHPLBJKB_02704 at 2816.203 kb on + strand, within OHPLBJKB_02704 at 2816.204 kb on - strand, within OHPLBJKB_02704 at 2816.313 kb on + strand, within OHPLBJKB_02704 at 2816.314 kb on - strand, within OHPLBJKB_02704 at 2816.411 kb on - strand at 2816.443 kb on + strand at 2816.563 kb on - strand at 2816.578 kb on + strand at 2816.594 kb on - strand at 2816.663 kb on + strand at 2816.761 kb on - strand, within OHPLBJKB_02705 at 2816.844 kb on + strand, within OHPLBJKB_02705 at 2816.946 kb on - strand, within OHPLBJKB_02705 at 2816.982 kb on + strand, within OHPLBJKB_02705 at 2816.982 kb on + strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2816.983 kb on - strand, within OHPLBJKB_02705 at 2817.129 kb on + strand at 2817.142 kb on - strand at 2817.146 kb on + strand at 2817.146 kb on + strand at 2817.147 kb on - strand at 2817.147 kb on - strand at 2817.167 kb on - strand at 2817.167 kb on - strand at 2817.168 kb on + strand at 2817.191 kb on - strand at 2817.191 kb on - strand at 2817.191 kb on - strand at 2817.191 kb on - strand at 2817.207 kb on + strand at 2817.254 kb on + strand at 2817.255 kb on - strand at 2817.255 kb on - strand at 2817.348 kb on + strand at 2817.349 kb on - strand at 2817.410 kb on + strand, within OHPLBJKB_02706 at 2817.410 kb on + strand, within OHPLBJKB_02706 at 2817.476 kb on - strand, within OHPLBJKB_02706 at 2817.476 kb on - strand, within OHPLBJKB_02706 at 2817.514 kb on + strand, within OHPLBJKB_02706 at 2817.514 kb on + strand, within OHPLBJKB_02706 at 2817.514 kb on + strand, within OHPLBJKB_02706 at 2817.514 kb on + strand, within OHPLBJKB_02706 at 2817.514 kb on + strand, within OHPLBJKB_02706 at 2817.515 kb on - strand, within OHPLBJKB_02706 at 2817.519 kb on + strand, within OHPLBJKB_02706 at 2817.519 kb on + strand, within OHPLBJKB_02706 at 2817.519 kb on + strand, within OHPLBJKB_02706 at 2817.520 kb on - strand, within OHPLBJKB_02706 at 2817.520 kb on - strand, within OHPLBJKB_02706 at 2817.538 kb on + strand, within OHPLBJKB_02706 at 2817.538 kb on + strand, within OHPLBJKB_02706 at 2817.538 kb on + strand, within OHPLBJKB_02706 at 2817.565 kb on + strand, within OHPLBJKB_02706 at 2817.565 kb on + strand, within OHPLBJKB_02706 at 2817.565 kb on + strand, within OHPLBJKB_02706 at 2817.566 kb on - strand, within OHPLBJKB_02706 at 2817.590 kb on - strand, within OHPLBJKB_02706 at 2817.606 kb on + strand, within OHPLBJKB_02706 at 2817.606 kb on + strand, within OHPLBJKB_02706 at 2817.607 kb on - strand, within OHPLBJKB_02706 at 2817.607 kb on - strand, within OHPLBJKB_02706 at 2817.607 kb on - strand, within OHPLBJKB_02706 at 2817.607 kb on - strand, within OHPLBJKB_02706 at 2817.661 kb on + strand, within OHPLBJKB_02706 at 2817.661 kb on + strand, within OHPLBJKB_02706 at 2817.662 kb on - strand, within OHPLBJKB_02706 at 2817.815 kb on + strand, within OHPLBJKB_02706 at 2817.816 kb on - strand, within OHPLBJKB_02706 at 2817.859 kb on + strand, within OHPLBJKB_02706 at 2817.862 kb on + strand, within OHPLBJKB_02706 at 2817.862 kb on + strand, within OHPLBJKB_02706 at 2817.863 kb on - strand, within OHPLBJKB_02706 at 2817.863 kb on - strand, within OHPLBJKB_02706 at 2817.863 kb on - strand, within OHPLBJKB_02706 at 2817.863 kb on - strand, within OHPLBJKB_02706 at 2817.879 kb on + strand, within OHPLBJKB_02706 at 2817.907 kb on - strand, within OHPLBJKB_02706 at 2817.907 kb on - strand, within OHPLBJKB_02706 at 2817.907 kb on - strand, within OHPLBJKB_02706 at 2818.071 kb on + strand, within OHPLBJKB_02706 at 2818.072 kb on - strand, within OHPLBJKB_02706
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI1 remove 2,815,708 + OHPLBJKB_02704 0.59 -2.0 2,815,712 - OHPLBJKB_02704 0.59 +7.6 2,815,712 - OHPLBJKB_02704 0.59 +0.2 2,815,712 - OHPLBJKB_02704 0.59 -2.6 2,815,756 + OHPLBJKB_02704 0.61 -1.0 2,815,757 - OHPLBJKB_02704 0.61 +1.6 2,815,917 - OHPLBJKB_02704 0.69 -1.1 2,816,024 - OHPLBJKB_02704 0.74 +1.2 2,816,025 + OHPLBJKB_02704 0.74 +0.3 2,816,025 + OHPLBJKB_02704 0.74 -0.7 2,816,025 + OHPLBJKB_02704 0.74 -0.6 2,816,026 - OHPLBJKB_02704 0.74 +1.7 2,816,026 - OHPLBJKB_02704 0.74 -0.1 2,816,026 - OHPLBJKB_02704 0.74 -1.9 2,816,035 + OHPLBJKB_02704 0.75 -0.4 2,816,203 + OHPLBJKB_02704 0.83 -1.2 2,816,204 - OHPLBJKB_02704 0.83 -2.1 2,816,313 + OHPLBJKB_02704 0.88 +0.3 2,816,314 - OHPLBJKB_02704 0.88 -0.4 2,816,411 - -2.3 2,816,443 + -1.7 2,816,563 - -0.7 2,816,578 + -0.2 2,816,594 - -1.6 2,816,663 + -0.1 2,816,761 - OHPLBJKB_02705 0.19 +0.9 2,816,844 + OHPLBJKB_02705 0.37 +0.9 2,816,946 - OHPLBJKB_02705 0.60 +2.4 2,816,982 + OHPLBJKB_02705 0.68 +1.3 2,816,982 + OHPLBJKB_02705 0.68 -2.2 2,816,983 - OHPLBJKB_02705 0.68 +1.7 2,816,983 - OHPLBJKB_02705 0.68 +1.4 2,816,983 - OHPLBJKB_02705 0.68 +2.0 2,816,983 - OHPLBJKB_02705 0.68 -0.7 2,816,983 - OHPLBJKB_02705 0.68 -0.2 2,816,983 - OHPLBJKB_02705 0.68 +0.8 2,816,983 - OHPLBJKB_02705 0.68 -0.4 2,816,983 - OHPLBJKB_02705 0.68 +0.5 2,816,983 - OHPLBJKB_02705 0.68 +1.3 2,816,983 - OHPLBJKB_02705 0.68 -1.7 2,817,129 + -0.7 2,817,142 - +0.1 2,817,146 + -1.0 2,817,146 + -0.1 2,817,147 - +0.3 2,817,147 - -0.7 2,817,167 - -0.9 2,817,167 - +1.1 2,817,168 + +1.7 2,817,191 - -0.7 2,817,191 - -0.7 2,817,191 - -0.7 2,817,191 - +0.5 2,817,207 + -0.4 2,817,254 + -2.4 2,817,255 - -0.0 2,817,255 - +0.3 2,817,348 + -0.3 2,817,349 - -0.6 2,817,410 + OHPLBJKB_02706 0.13 -0.0 2,817,410 + OHPLBJKB_02706 0.13 +0.1 2,817,476 - OHPLBJKB_02706 0.16 +0.3 2,817,476 - OHPLBJKB_02706 0.16 -0.0 2,817,514 + OHPLBJKB_02706 0.18 -2.2 2,817,514 + OHPLBJKB_02706 0.18 +0.5 2,817,514 + OHPLBJKB_02706 0.18 -2.2 2,817,514 + OHPLBJKB_02706 0.18 -1.4 2,817,514 + OHPLBJKB_02706 0.18 +0.6 2,817,515 - OHPLBJKB_02706 0.18 +0.2 2,817,519 + OHPLBJKB_02706 0.18 +0.5 2,817,519 + OHPLBJKB_02706 0.18 -0.1 2,817,519 + OHPLBJKB_02706 0.18 -0.0 2,817,520 - OHPLBJKB_02706 0.18 +0.8 2,817,520 - OHPLBJKB_02706 0.18 +0.9 2,817,538 + OHPLBJKB_02706 0.19 +1.5 2,817,538 + OHPLBJKB_02706 0.19 -0.8 2,817,538 + OHPLBJKB_02706 0.19 -0.4 2,817,565 + OHPLBJKB_02706 0.20 +1.7 2,817,565 + OHPLBJKB_02706 0.20 -0.9 2,817,565 + OHPLBJKB_02706 0.20 -1.0 2,817,566 - OHPLBJKB_02706 0.20 +1.3 2,817,590 - OHPLBJKB_02706 0.21 +0.2 2,817,606 + OHPLBJKB_02706 0.22 +0.3 2,817,606 + OHPLBJKB_02706 0.22 -0.4 2,817,607 - OHPLBJKB_02706 0.22 +0.7 2,817,607 - OHPLBJKB_02706 0.22 +0.1 2,817,607 - OHPLBJKB_02706 0.22 -1.0 2,817,607 - OHPLBJKB_02706 0.22 +1.0 2,817,661 + OHPLBJKB_02706 0.24 +0.9 2,817,661 + OHPLBJKB_02706 0.24 +0.2 2,817,662 - OHPLBJKB_02706 0.24 -1.3 2,817,815 + OHPLBJKB_02706 0.32 -1.6 2,817,816 - OHPLBJKB_02706 0.32 -0.4 2,817,859 + OHPLBJKB_02706 0.34 -0.3 2,817,862 + OHPLBJKB_02706 0.34 -0.2 2,817,862 + OHPLBJKB_02706 0.34 +0.4 2,817,863 - OHPLBJKB_02706 0.34 -1.0 2,817,863 - OHPLBJKB_02706 0.34 +1.1 2,817,863 - OHPLBJKB_02706 0.34 +0.9 2,817,863 - OHPLBJKB_02706 0.34 +0.2 2,817,879 + OHPLBJKB_02706 0.34 -1.2 2,817,907 - OHPLBJKB_02706 0.36 -0.7 2,817,907 - OHPLBJKB_02706 0.36 +0.6 2,817,907 - OHPLBJKB_02706 0.36 +1.2 2,818,071 + OHPLBJKB_02706 0.43 +0.8 2,818,072 - OHPLBJKB_02706 0.43 +0.9
Or see this region's nucleotide sequence