Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02705

Experiment: bur MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02704 and OHPLBJKB_02705 are separated by 122 nucleotidesOHPLBJKB_02705 and OHPLBJKB_02706 are separated by 9 nucleotides OHPLBJKB_02704: OHPLBJKB_02704 - DNA helicase IV, at 2,814,500 to 2,816,554 _02704 OHPLBJKB_02705: OHPLBJKB_02705 - Inner membrane protein YccF, at 2,816,677 to 2,817,123 _02705 OHPLBJKB_02706: OHPLBJKB_02706 - Inner membrane protein YccS, at 2,817,133 to 2,819,295 _02706 Position (kb) 2816 2817 2818Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 2815.708 kb on + strand, within OHPLBJKB_02704at 2815.712 kb on - strand, within OHPLBJKB_02704at 2815.712 kb on - strand, within OHPLBJKB_02704at 2815.712 kb on - strand, within OHPLBJKB_02704at 2815.756 kb on + strand, within OHPLBJKB_02704at 2815.757 kb on - strand, within OHPLBJKB_02704at 2815.917 kb on - strand, within OHPLBJKB_02704at 2816.024 kb on - strand, within OHPLBJKB_02704at 2816.025 kb on + strand, within OHPLBJKB_02704at 2816.025 kb on + strand, within OHPLBJKB_02704at 2816.025 kb on + strand, within OHPLBJKB_02704at 2816.026 kb on - strand, within OHPLBJKB_02704at 2816.026 kb on - strand, within OHPLBJKB_02704at 2816.026 kb on - strand, within OHPLBJKB_02704at 2816.035 kb on + strand, within OHPLBJKB_02704at 2816.203 kb on + strand, within OHPLBJKB_02704at 2816.204 kb on - strand, within OHPLBJKB_02704at 2816.313 kb on + strand, within OHPLBJKB_02704at 2816.314 kb on - strand, within OHPLBJKB_02704at 2816.411 kb on - strandat 2816.443 kb on + strandat 2816.563 kb on - strandat 2816.578 kb on + strandat 2816.594 kb on - strandat 2816.663 kb on + strandat 2816.761 kb on - strand, within OHPLBJKB_02705at 2816.844 kb on + strand, within OHPLBJKB_02705at 2816.946 kb on - strand, within OHPLBJKB_02705at 2816.982 kb on + strand, within OHPLBJKB_02705at 2816.982 kb on + strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2816.983 kb on - strand, within OHPLBJKB_02705at 2817.129 kb on + strandat 2817.142 kb on - strandat 2817.146 kb on + strandat 2817.146 kb on + strandat 2817.147 kb on - strandat 2817.147 kb on - strandat 2817.167 kb on - strandat 2817.167 kb on - strandat 2817.168 kb on + strandat 2817.191 kb on - strandat 2817.191 kb on - strandat 2817.191 kb on - strandat 2817.191 kb on - strandat 2817.207 kb on + strandat 2817.254 kb on + strandat 2817.255 kb on - strandat 2817.255 kb on - strandat 2817.348 kb on + strandat 2817.349 kb on - strandat 2817.410 kb on + strand, within OHPLBJKB_02706at 2817.410 kb on + strand, within OHPLBJKB_02706at 2817.476 kb on - strand, within OHPLBJKB_02706at 2817.476 kb on - strand, within OHPLBJKB_02706at 2817.514 kb on + strand, within OHPLBJKB_02706at 2817.514 kb on + strand, within OHPLBJKB_02706at 2817.514 kb on + strand, within OHPLBJKB_02706at 2817.514 kb on + strand, within OHPLBJKB_02706at 2817.514 kb on + strand, within OHPLBJKB_02706at 2817.515 kb on - strand, within OHPLBJKB_02706at 2817.519 kb on + strand, within OHPLBJKB_02706at 2817.519 kb on + strand, within OHPLBJKB_02706at 2817.519 kb on + strand, within OHPLBJKB_02706at 2817.520 kb on - strand, within OHPLBJKB_02706at 2817.520 kb on - strand, within OHPLBJKB_02706at 2817.538 kb on + strand, within OHPLBJKB_02706at 2817.538 kb on + strand, within OHPLBJKB_02706at 2817.538 kb on + strand, within OHPLBJKB_02706at 2817.565 kb on + strand, within OHPLBJKB_02706at 2817.565 kb on + strand, within OHPLBJKB_02706at 2817.565 kb on + strand, within OHPLBJKB_02706at 2817.566 kb on - strand, within OHPLBJKB_02706at 2817.590 kb on - strand, within OHPLBJKB_02706at 2817.606 kb on + strand, within OHPLBJKB_02706at 2817.606 kb on + strand, within OHPLBJKB_02706at 2817.607 kb on - strand, within OHPLBJKB_02706at 2817.607 kb on - strand, within OHPLBJKB_02706at 2817.607 kb on - strand, within OHPLBJKB_02706at 2817.607 kb on - strand, within OHPLBJKB_02706at 2817.661 kb on + strand, within OHPLBJKB_02706at 2817.661 kb on + strand, within OHPLBJKB_02706at 2817.662 kb on - strand, within OHPLBJKB_02706at 2817.815 kb on + strand, within OHPLBJKB_02706at 2817.816 kb on - strand, within OHPLBJKB_02706at 2817.859 kb on + strand, within OHPLBJKB_02706at 2817.862 kb on + strand, within OHPLBJKB_02706at 2817.862 kb on + strand, within OHPLBJKB_02706at 2817.863 kb on - strand, within OHPLBJKB_02706at 2817.863 kb on - strand, within OHPLBJKB_02706at 2817.863 kb on - strand, within OHPLBJKB_02706at 2817.863 kb on - strand, within OHPLBJKB_02706at 2817.879 kb on + strand, within OHPLBJKB_02706at 2817.907 kb on - strand, within OHPLBJKB_02706at 2817.907 kb on - strand, within OHPLBJKB_02706at 2817.907 kb on - strand, within OHPLBJKB_02706at 2818.071 kb on + strand, within OHPLBJKB_02706at 2818.072 kb on - strand, within OHPLBJKB_02706

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI1
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2,815,708 + OHPLBJKB_02704 0.59 -2.0
2,815,712 - OHPLBJKB_02704 0.59 +7.6
2,815,712 - OHPLBJKB_02704 0.59 +0.2
2,815,712 - OHPLBJKB_02704 0.59 -2.6
2,815,756 + OHPLBJKB_02704 0.61 -1.0
2,815,757 - OHPLBJKB_02704 0.61 +1.6
2,815,917 - OHPLBJKB_02704 0.69 -1.1
2,816,024 - OHPLBJKB_02704 0.74 +1.2
2,816,025 + OHPLBJKB_02704 0.74 +0.3
2,816,025 + OHPLBJKB_02704 0.74 -0.7
2,816,025 + OHPLBJKB_02704 0.74 -0.6
2,816,026 - OHPLBJKB_02704 0.74 +1.7
2,816,026 - OHPLBJKB_02704 0.74 -0.1
2,816,026 - OHPLBJKB_02704 0.74 -1.9
2,816,035 + OHPLBJKB_02704 0.75 -0.4
2,816,203 + OHPLBJKB_02704 0.83 -1.2
2,816,204 - OHPLBJKB_02704 0.83 -2.1
2,816,313 + OHPLBJKB_02704 0.88 +0.3
2,816,314 - OHPLBJKB_02704 0.88 -0.4
2,816,411 - -2.3
2,816,443 + -1.7
2,816,563 - -0.7
2,816,578 + -0.2
2,816,594 - -1.6
2,816,663 + -0.1
2,816,761 - OHPLBJKB_02705 0.19 +0.9
2,816,844 + OHPLBJKB_02705 0.37 +0.9
2,816,946 - OHPLBJKB_02705 0.60 +2.4
2,816,982 + OHPLBJKB_02705 0.68 +1.3
2,816,982 + OHPLBJKB_02705 0.68 -2.2
2,816,983 - OHPLBJKB_02705 0.68 +1.7
2,816,983 - OHPLBJKB_02705 0.68 +1.4
2,816,983 - OHPLBJKB_02705 0.68 +2.0
2,816,983 - OHPLBJKB_02705 0.68 -0.7
2,816,983 - OHPLBJKB_02705 0.68 -0.2
2,816,983 - OHPLBJKB_02705 0.68 +0.8
2,816,983 - OHPLBJKB_02705 0.68 -0.4
2,816,983 - OHPLBJKB_02705 0.68 +0.5
2,816,983 - OHPLBJKB_02705 0.68 +1.3
2,816,983 - OHPLBJKB_02705 0.68 -1.7
2,817,129 + -0.7
2,817,142 - +0.1
2,817,146 + -1.0
2,817,146 + -0.1
2,817,147 - +0.3
2,817,147 - -0.7
2,817,167 - -0.9
2,817,167 - +1.1
2,817,168 + +1.7
2,817,191 - -0.7
2,817,191 - -0.7
2,817,191 - -0.7
2,817,191 - +0.5
2,817,207 + -0.4
2,817,254 + -2.4
2,817,255 - -0.0
2,817,255 - +0.3
2,817,348 + -0.3
2,817,349 - -0.6
2,817,410 + OHPLBJKB_02706 0.13 -0.0
2,817,410 + OHPLBJKB_02706 0.13 +0.1
2,817,476 - OHPLBJKB_02706 0.16 +0.3
2,817,476 - OHPLBJKB_02706 0.16 -0.0
2,817,514 + OHPLBJKB_02706 0.18 -2.2
2,817,514 + OHPLBJKB_02706 0.18 +0.5
2,817,514 + OHPLBJKB_02706 0.18 -2.2
2,817,514 + OHPLBJKB_02706 0.18 -1.4
2,817,514 + OHPLBJKB_02706 0.18 +0.6
2,817,515 - OHPLBJKB_02706 0.18 +0.2
2,817,519 + OHPLBJKB_02706 0.18 +0.5
2,817,519 + OHPLBJKB_02706 0.18 -0.1
2,817,519 + OHPLBJKB_02706 0.18 -0.0
2,817,520 - OHPLBJKB_02706 0.18 +0.8
2,817,520 - OHPLBJKB_02706 0.18 +0.9
2,817,538 + OHPLBJKB_02706 0.19 +1.5
2,817,538 + OHPLBJKB_02706 0.19 -0.8
2,817,538 + OHPLBJKB_02706 0.19 -0.4
2,817,565 + OHPLBJKB_02706 0.20 +1.7
2,817,565 + OHPLBJKB_02706 0.20 -0.9
2,817,565 + OHPLBJKB_02706 0.20 -1.0
2,817,566 - OHPLBJKB_02706 0.20 +1.3
2,817,590 - OHPLBJKB_02706 0.21 +0.2
2,817,606 + OHPLBJKB_02706 0.22 +0.3
2,817,606 + OHPLBJKB_02706 0.22 -0.4
2,817,607 - OHPLBJKB_02706 0.22 +0.7
2,817,607 - OHPLBJKB_02706 0.22 +0.1
2,817,607 - OHPLBJKB_02706 0.22 -1.0
2,817,607 - OHPLBJKB_02706 0.22 +1.0
2,817,661 + OHPLBJKB_02706 0.24 +0.9
2,817,661 + OHPLBJKB_02706 0.24 +0.2
2,817,662 - OHPLBJKB_02706 0.24 -1.3
2,817,815 + OHPLBJKB_02706 0.32 -1.6
2,817,816 - OHPLBJKB_02706 0.32 -0.4
2,817,859 + OHPLBJKB_02706 0.34 -0.3
2,817,862 + OHPLBJKB_02706 0.34 -0.2
2,817,862 + OHPLBJKB_02706 0.34 +0.4
2,817,863 - OHPLBJKB_02706 0.34 -1.0
2,817,863 - OHPLBJKB_02706 0.34 +1.1
2,817,863 - OHPLBJKB_02706 0.34 +0.9
2,817,863 - OHPLBJKB_02706 0.34 +0.2
2,817,879 + OHPLBJKB_02706 0.34 -1.2
2,817,907 - OHPLBJKB_02706 0.36 -0.7
2,817,907 - OHPLBJKB_02706 0.36 +0.6
2,817,907 - OHPLBJKB_02706 0.36 +1.2
2,818,071 + OHPLBJKB_02706 0.43 +0.8
2,818,072 - OHPLBJKB_02706 0.43 +0.9

Or see this region's nucleotide sequence