Experiment: bur MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02583 and OHPLBJKB_02584 are separated by 65 nucleotides OHPLBJKB_02584 and OHPLBJKB_02585 overlap by 1 nucleotides
OHPLBJKB_02583: OHPLBJKB_02583 - Flagellar hook-associated protein 1, at 2,698,942 to 2,700,585
_02583
OHPLBJKB_02584: OHPLBJKB_02584 - Peptidoglycan hydrolase FlgJ, at 2,700,651 to 2,701,592
_02584
OHPLBJKB_02585: OHPLBJKB_02585 - Flagellar P-ring protein, at 2,701,592 to 2,702,689
_02585
Position (kb)
2700
2701
2702 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2699.697 kb on + strand, within OHPLBJKB_02583 at 2699.698 kb on - strand, within OHPLBJKB_02583 at 2699.701 kb on - strand, within OHPLBJKB_02583 at 2699.701 kb on - strand, within OHPLBJKB_02583 at 2699.807 kb on + strand, within OHPLBJKB_02583 at 2699.807 kb on + strand, within OHPLBJKB_02583 at 2699.868 kb on + strand, within OHPLBJKB_02583 at 2699.910 kb on + strand, within OHPLBJKB_02583 at 2699.911 kb on - strand, within OHPLBJKB_02583 at 2699.911 kb on - strand, within OHPLBJKB_02583 at 2699.912 kb on + strand, within OHPLBJKB_02583 at 2699.912 kb on + strand, within OHPLBJKB_02583 at 2699.912 kb on + strand, within OHPLBJKB_02583 at 2699.913 kb on - strand, within OHPLBJKB_02583 at 2699.913 kb on - strand, within OHPLBJKB_02583 at 2699.913 kb on - strand, within OHPLBJKB_02583 at 2699.913 kb on - strand, within OHPLBJKB_02583 at 2699.913 kb on - strand, within OHPLBJKB_02583 at 2699.913 kb on - strand, within OHPLBJKB_02583 at 2699.916 kb on + strand, within OHPLBJKB_02583 at 2699.917 kb on - strand, within OHPLBJKB_02583 at 2700.071 kb on + strand, within OHPLBJKB_02583 at 2700.137 kb on + strand, within OHPLBJKB_02583 at 2700.279 kb on + strand, within OHPLBJKB_02583 at 2700.294 kb on + strand, within OHPLBJKB_02583 at 2700.294 kb on + strand, within OHPLBJKB_02583 at 2700.295 kb on - strand, within OHPLBJKB_02583 at 2700.295 kb on - strand, within OHPLBJKB_02583 at 2700.295 kb on - strand, within OHPLBJKB_02583 at 2700.295 kb on - strand, within OHPLBJKB_02583 at 2700.295 kb on - strand, within OHPLBJKB_02583 at 2700.295 kb on - strand, within OHPLBJKB_02583 at 2700.362 kb on - strand, within OHPLBJKB_02583 at 2700.375 kb on + strand, within OHPLBJKB_02583 at 2700.375 kb on + strand, within OHPLBJKB_02583 at 2700.375 kb on + strand, within OHPLBJKB_02583 at 2700.376 kb on - strand, within OHPLBJKB_02583 at 2700.386 kb on + strand, within OHPLBJKB_02583 at 2700.410 kb on + strand, within OHPLBJKB_02583 at 2700.450 kb on + strand at 2700.466 kb on - strand at 2700.498 kb on + strand at 2700.500 kb on + strand at 2700.501 kb on - strand at 2700.511 kb on - strand at 2700.511 kb on - strand at 2700.514 kb on - strand at 2700.516 kb on + strand at 2700.517 kb on - strand at 2700.596 kb on + strand at 2700.597 kb on - strand at 2700.598 kb on + strand at 2700.617 kb on + strand at 2700.662 kb on + strand at 2700.745 kb on + strand at 2700.745 kb on + strand at 2700.837 kb on - strand, within OHPLBJKB_02584 at 2700.887 kb on - strand, within OHPLBJKB_02584 at 2700.954 kb on - strand, within OHPLBJKB_02584 at 2701.001 kb on - strand, within OHPLBJKB_02584 at 2701.001 kb on - strand, within OHPLBJKB_02584 at 2701.001 kb on - strand, within OHPLBJKB_02584 at 2701.146 kb on - strand, within OHPLBJKB_02584 at 2701.172 kb on - strand, within OHPLBJKB_02584 at 2701.172 kb on - strand, within OHPLBJKB_02584 at 2701.172 kb on - strand, within OHPLBJKB_02584 at 2701.175 kb on + strand, within OHPLBJKB_02584 at 2701.176 kb on - strand, within OHPLBJKB_02584 at 2701.176 kb on - strand, within OHPLBJKB_02584 at 2701.268 kb on + strand, within OHPLBJKB_02584 at 2701.372 kb on + strand, within OHPLBJKB_02584 at 2701.372 kb on + strand, within OHPLBJKB_02584 at 2701.373 kb on - strand, within OHPLBJKB_02584 at 2701.376 kb on + strand, within OHPLBJKB_02584 at 2701.376 kb on + strand, within OHPLBJKB_02584 at 2701.376 kb on + strand, within OHPLBJKB_02584 at 2701.376 kb on + strand, within OHPLBJKB_02584 at 2701.376 kb on + strand, within OHPLBJKB_02584 at 2701.376 kb on + strand, within OHPLBJKB_02584 at 2701.377 kb on - strand, within OHPLBJKB_02584 at 2701.377 kb on - strand, within OHPLBJKB_02584 at 2701.382 kb on + strand, within OHPLBJKB_02584 at 2701.383 kb on - strand, within OHPLBJKB_02584 at 2701.384 kb on + strand, within OHPLBJKB_02584 at 2701.384 kb on + strand, within OHPLBJKB_02584 at 2701.385 kb on - strand, within OHPLBJKB_02584 at 2701.647 kb on - strand at 2701.932 kb on - strand, within OHPLBJKB_02585 at 2701.932 kb on - strand, within OHPLBJKB_02585 at 2701.936 kb on + strand, within OHPLBJKB_02585 at 2701.958 kb on - strand, within OHPLBJKB_02585 at 2702.043 kb on - strand, within OHPLBJKB_02585 at 2702.084 kb on - strand, within OHPLBJKB_02585 at 2702.134 kb on + strand, within OHPLBJKB_02585 at 2702.141 kb on - strand, within OHPLBJKB_02585 at 2702.270 kb on - strand, within OHPLBJKB_02585 at 2702.289 kb on + strand, within OHPLBJKB_02585 at 2702.289 kb on + strand, within OHPLBJKB_02585 at 2702.290 kb on - strand, within OHPLBJKB_02585 at 2702.290 kb on - strand, within OHPLBJKB_02585 at 2702.290 kb on - strand, within OHPLBJKB_02585 at 2702.290 kb on - strand, within OHPLBJKB_02585 at 2702.332 kb on + strand, within OHPLBJKB_02585 at 2702.356 kb on + strand, within OHPLBJKB_02585 at 2702.501 kb on - strand, within OHPLBJKB_02585 at 2702.503 kb on + strand, within OHPLBJKB_02585 at 2702.503 kb on + strand, within OHPLBJKB_02585
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI1 remove 2,699,697 + OHPLBJKB_02583 0.46 -1.5 2,699,698 - OHPLBJKB_02583 0.46 +0.2 2,699,701 - OHPLBJKB_02583 0.46 -1.2 2,699,701 - OHPLBJKB_02583 0.46 -2.8 2,699,807 + OHPLBJKB_02583 0.53 +0.3 2,699,807 + OHPLBJKB_02583 0.53 +1.8 2,699,868 + OHPLBJKB_02583 0.56 -0.1 2,699,910 + OHPLBJKB_02583 0.59 +0.6 2,699,911 - OHPLBJKB_02583 0.59 -0.4 2,699,911 - OHPLBJKB_02583 0.59 -1.1 2,699,912 + OHPLBJKB_02583 0.59 -0.7 2,699,912 + OHPLBJKB_02583 0.59 +1.8 2,699,912 + OHPLBJKB_02583 0.59 -0.2 2,699,913 - OHPLBJKB_02583 0.59 -1.4 2,699,913 - OHPLBJKB_02583 0.59 -1.9 2,699,913 - OHPLBJKB_02583 0.59 +0.1 2,699,913 - OHPLBJKB_02583 0.59 -1.5 2,699,913 - OHPLBJKB_02583 0.59 -1.0 2,699,913 - OHPLBJKB_02583 0.59 -0.5 2,699,916 + OHPLBJKB_02583 0.59 -1.1 2,699,917 - OHPLBJKB_02583 0.59 -0.2 2,700,071 + OHPLBJKB_02583 0.69 +2.1 2,700,137 + OHPLBJKB_02583 0.73 +1.6 2,700,279 + OHPLBJKB_02583 0.81 +0.6 2,700,294 + OHPLBJKB_02583 0.82 +0.7 2,700,294 + OHPLBJKB_02583 0.82 +0.1 2,700,295 - OHPLBJKB_02583 0.82 +0.3 2,700,295 - OHPLBJKB_02583 0.82 +0.3 2,700,295 - OHPLBJKB_02583 0.82 -0.5 2,700,295 - OHPLBJKB_02583 0.82 -0.2 2,700,295 - OHPLBJKB_02583 0.82 -0.1 2,700,295 - OHPLBJKB_02583 0.82 -1.7 2,700,362 - OHPLBJKB_02583 0.86 -0.1 2,700,375 + OHPLBJKB_02583 0.87 +0.8 2,700,375 + OHPLBJKB_02583 0.87 +1.6 2,700,375 + OHPLBJKB_02583 0.87 -2.0 2,700,376 - OHPLBJKB_02583 0.87 -1.2 2,700,386 + OHPLBJKB_02583 0.88 -1.1 2,700,410 + OHPLBJKB_02583 0.89 +1.7 2,700,450 + +0.4 2,700,466 - -1.5 2,700,498 + -1.0 2,700,500 + -1.5 2,700,501 - -0.7 2,700,511 - -2.1 2,700,511 - +0.6 2,700,514 - -0.5 2,700,516 + +1.6 2,700,517 - +0.1 2,700,596 + -0.2 2,700,597 - -0.3 2,700,598 + +1.2 2,700,617 + +2.0 2,700,662 + -0.0 2,700,745 + +2.3 2,700,745 + -0.7 2,700,837 - OHPLBJKB_02584 0.20 -0.6 2,700,887 - OHPLBJKB_02584 0.25 -0.4 2,700,954 - OHPLBJKB_02584 0.32 +0.3 2,701,001 - OHPLBJKB_02584 0.37 +1.0 2,701,001 - OHPLBJKB_02584 0.37 +0.5 2,701,001 - OHPLBJKB_02584 0.37 -0.3 2,701,146 - OHPLBJKB_02584 0.53 -0.6 2,701,172 - OHPLBJKB_02584 0.55 +0.4 2,701,172 - OHPLBJKB_02584 0.55 +2.6 2,701,172 - OHPLBJKB_02584 0.55 -0.4 2,701,175 + OHPLBJKB_02584 0.56 -0.1 2,701,176 - OHPLBJKB_02584 0.56 +0.2 2,701,176 - OHPLBJKB_02584 0.56 +0.3 2,701,268 + OHPLBJKB_02584 0.65 +0.4 2,701,372 + OHPLBJKB_02584 0.77 -0.4 2,701,372 + OHPLBJKB_02584 0.77 +0.4 2,701,373 - OHPLBJKB_02584 0.77 -0.7 2,701,376 + OHPLBJKB_02584 0.77 +0.1 2,701,376 + OHPLBJKB_02584 0.77 +0.3 2,701,376 + OHPLBJKB_02584 0.77 -0.6 2,701,376 + OHPLBJKB_02584 0.77 +2.6 2,701,376 + OHPLBJKB_02584 0.77 +0.8 2,701,376 + OHPLBJKB_02584 0.77 +0.3 2,701,377 - OHPLBJKB_02584 0.77 -1.3 2,701,377 - OHPLBJKB_02584 0.77 +3.2 2,701,382 + OHPLBJKB_02584 0.78 -0.4 2,701,383 - OHPLBJKB_02584 0.78 -0.4 2,701,384 + OHPLBJKB_02584 0.78 +0.3 2,701,384 + OHPLBJKB_02584 0.78 +0.3 2,701,385 - OHPLBJKB_02584 0.78 +3.1 2,701,647 - -0.2 2,701,932 - OHPLBJKB_02585 0.31 -2.5 2,701,932 - OHPLBJKB_02585 0.31 +1.4 2,701,936 + OHPLBJKB_02585 0.31 +1.8 2,701,958 - OHPLBJKB_02585 0.33 -0.1 2,702,043 - OHPLBJKB_02585 0.41 -0.2 2,702,084 - OHPLBJKB_02585 0.45 -2.3 2,702,134 + OHPLBJKB_02585 0.49 +1.7 2,702,141 - OHPLBJKB_02585 0.50 -0.4 2,702,270 - OHPLBJKB_02585 0.62 -3.3 2,702,289 + OHPLBJKB_02585 0.63 -0.1 2,702,289 + OHPLBJKB_02585 0.63 +0.4 2,702,290 - OHPLBJKB_02585 0.64 -1.2 2,702,290 - OHPLBJKB_02585 0.64 -1.2 2,702,290 - OHPLBJKB_02585 0.64 +0.5 2,702,290 - OHPLBJKB_02585 0.64 -2.3 2,702,332 + OHPLBJKB_02585 0.67 +0.8 2,702,356 + OHPLBJKB_02585 0.70 -0.1 2,702,501 - OHPLBJKB_02585 0.83 -1.7 2,702,503 + OHPLBJKB_02585 0.83 +0.3 2,702,503 + OHPLBJKB_02585 0.83 +1.8
Or see this region's nucleotide sequence