Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02584

Experiment: bur MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02583 and OHPLBJKB_02584 are separated by 65 nucleotidesOHPLBJKB_02584 and OHPLBJKB_02585 overlap by 1 nucleotides OHPLBJKB_02583: OHPLBJKB_02583 - Flagellar hook-associated protein 1, at 2,698,942 to 2,700,585 _02583 OHPLBJKB_02584: OHPLBJKB_02584 - Peptidoglycan hydrolase FlgJ, at 2,700,651 to 2,701,592 _02584 OHPLBJKB_02585: OHPLBJKB_02585 - Flagellar P-ring protein, at 2,701,592 to 2,702,689 _02585 Position (kb) 2700 2701 2702Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2699.697 kb on + strand, within OHPLBJKB_02583at 2699.698 kb on - strand, within OHPLBJKB_02583at 2699.701 kb on - strand, within OHPLBJKB_02583at 2699.701 kb on - strand, within OHPLBJKB_02583at 2699.807 kb on + strand, within OHPLBJKB_02583at 2699.807 kb on + strand, within OHPLBJKB_02583at 2699.868 kb on + strand, within OHPLBJKB_02583at 2699.910 kb on + strand, within OHPLBJKB_02583at 2699.911 kb on - strand, within OHPLBJKB_02583at 2699.911 kb on - strand, within OHPLBJKB_02583at 2699.912 kb on + strand, within OHPLBJKB_02583at 2699.912 kb on + strand, within OHPLBJKB_02583at 2699.912 kb on + strand, within OHPLBJKB_02583at 2699.913 kb on - strand, within OHPLBJKB_02583at 2699.913 kb on - strand, within OHPLBJKB_02583at 2699.913 kb on - strand, within OHPLBJKB_02583at 2699.913 kb on - strand, within OHPLBJKB_02583at 2699.913 kb on - strand, within OHPLBJKB_02583at 2699.913 kb on - strand, within OHPLBJKB_02583at 2699.916 kb on + strand, within OHPLBJKB_02583at 2699.917 kb on - strand, within OHPLBJKB_02583at 2700.071 kb on + strand, within OHPLBJKB_02583at 2700.137 kb on + strand, within OHPLBJKB_02583at 2700.279 kb on + strand, within OHPLBJKB_02583at 2700.294 kb on + strand, within OHPLBJKB_02583at 2700.294 kb on + strand, within OHPLBJKB_02583at 2700.295 kb on - strand, within OHPLBJKB_02583at 2700.295 kb on - strand, within OHPLBJKB_02583at 2700.295 kb on - strand, within OHPLBJKB_02583at 2700.295 kb on - strand, within OHPLBJKB_02583at 2700.295 kb on - strand, within OHPLBJKB_02583at 2700.295 kb on - strand, within OHPLBJKB_02583at 2700.362 kb on - strand, within OHPLBJKB_02583at 2700.375 kb on + strand, within OHPLBJKB_02583at 2700.375 kb on + strand, within OHPLBJKB_02583at 2700.375 kb on + strand, within OHPLBJKB_02583at 2700.376 kb on - strand, within OHPLBJKB_02583at 2700.386 kb on + strand, within OHPLBJKB_02583at 2700.410 kb on + strand, within OHPLBJKB_02583at 2700.450 kb on + strandat 2700.466 kb on - strandat 2700.498 kb on + strandat 2700.500 kb on + strandat 2700.501 kb on - strandat 2700.511 kb on - strandat 2700.511 kb on - strandat 2700.514 kb on - strandat 2700.516 kb on + strandat 2700.517 kb on - strandat 2700.596 kb on + strandat 2700.597 kb on - strandat 2700.598 kb on + strandat 2700.617 kb on + strandat 2700.662 kb on + strandat 2700.745 kb on + strandat 2700.745 kb on + strandat 2700.837 kb on - strand, within OHPLBJKB_02584at 2700.887 kb on - strand, within OHPLBJKB_02584at 2700.954 kb on - strand, within OHPLBJKB_02584at 2701.001 kb on - strand, within OHPLBJKB_02584at 2701.001 kb on - strand, within OHPLBJKB_02584at 2701.001 kb on - strand, within OHPLBJKB_02584at 2701.146 kb on - strand, within OHPLBJKB_02584at 2701.172 kb on - strand, within OHPLBJKB_02584at 2701.172 kb on - strand, within OHPLBJKB_02584at 2701.172 kb on - strand, within OHPLBJKB_02584at 2701.175 kb on + strand, within OHPLBJKB_02584at 2701.176 kb on - strand, within OHPLBJKB_02584at 2701.176 kb on - strand, within OHPLBJKB_02584at 2701.268 kb on + strand, within OHPLBJKB_02584at 2701.372 kb on + strand, within OHPLBJKB_02584at 2701.372 kb on + strand, within OHPLBJKB_02584at 2701.373 kb on - strand, within OHPLBJKB_02584at 2701.376 kb on + strand, within OHPLBJKB_02584at 2701.376 kb on + strand, within OHPLBJKB_02584at 2701.376 kb on + strand, within OHPLBJKB_02584at 2701.376 kb on + strand, within OHPLBJKB_02584at 2701.376 kb on + strand, within OHPLBJKB_02584at 2701.376 kb on + strand, within OHPLBJKB_02584at 2701.377 kb on - strand, within OHPLBJKB_02584at 2701.377 kb on - strand, within OHPLBJKB_02584at 2701.382 kb on + strand, within OHPLBJKB_02584at 2701.383 kb on - strand, within OHPLBJKB_02584at 2701.384 kb on + strand, within OHPLBJKB_02584at 2701.384 kb on + strand, within OHPLBJKB_02584at 2701.385 kb on - strand, within OHPLBJKB_02584at 2701.647 kb on - strandat 2701.932 kb on - strand, within OHPLBJKB_02585at 2701.932 kb on - strand, within OHPLBJKB_02585at 2701.936 kb on + strand, within OHPLBJKB_02585at 2701.958 kb on - strand, within OHPLBJKB_02585at 2702.043 kb on - strand, within OHPLBJKB_02585at 2702.084 kb on - strand, within OHPLBJKB_02585at 2702.134 kb on + strand, within OHPLBJKB_02585at 2702.141 kb on - strand, within OHPLBJKB_02585at 2702.270 kb on - strand, within OHPLBJKB_02585at 2702.289 kb on + strand, within OHPLBJKB_02585at 2702.289 kb on + strand, within OHPLBJKB_02585at 2702.290 kb on - strand, within OHPLBJKB_02585at 2702.290 kb on - strand, within OHPLBJKB_02585at 2702.290 kb on - strand, within OHPLBJKB_02585at 2702.290 kb on - strand, within OHPLBJKB_02585at 2702.332 kb on + strand, within OHPLBJKB_02585at 2702.356 kb on + strand, within OHPLBJKB_02585at 2702.501 kb on - strand, within OHPLBJKB_02585at 2702.503 kb on + strand, within OHPLBJKB_02585at 2702.503 kb on + strand, within OHPLBJKB_02585

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI1
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2,699,697 + OHPLBJKB_02583 0.46 -1.5
2,699,698 - OHPLBJKB_02583 0.46 +0.2
2,699,701 - OHPLBJKB_02583 0.46 -1.2
2,699,701 - OHPLBJKB_02583 0.46 -2.8
2,699,807 + OHPLBJKB_02583 0.53 +0.3
2,699,807 + OHPLBJKB_02583 0.53 +1.8
2,699,868 + OHPLBJKB_02583 0.56 -0.1
2,699,910 + OHPLBJKB_02583 0.59 +0.6
2,699,911 - OHPLBJKB_02583 0.59 -0.4
2,699,911 - OHPLBJKB_02583 0.59 -1.1
2,699,912 + OHPLBJKB_02583 0.59 -0.7
2,699,912 + OHPLBJKB_02583 0.59 +1.8
2,699,912 + OHPLBJKB_02583 0.59 -0.2
2,699,913 - OHPLBJKB_02583 0.59 -1.4
2,699,913 - OHPLBJKB_02583 0.59 -1.9
2,699,913 - OHPLBJKB_02583 0.59 +0.1
2,699,913 - OHPLBJKB_02583 0.59 -1.5
2,699,913 - OHPLBJKB_02583 0.59 -1.0
2,699,913 - OHPLBJKB_02583 0.59 -0.5
2,699,916 + OHPLBJKB_02583 0.59 -1.1
2,699,917 - OHPLBJKB_02583 0.59 -0.2
2,700,071 + OHPLBJKB_02583 0.69 +2.1
2,700,137 + OHPLBJKB_02583 0.73 +1.6
2,700,279 + OHPLBJKB_02583 0.81 +0.6
2,700,294 + OHPLBJKB_02583 0.82 +0.7
2,700,294 + OHPLBJKB_02583 0.82 +0.1
2,700,295 - OHPLBJKB_02583 0.82 +0.3
2,700,295 - OHPLBJKB_02583 0.82 +0.3
2,700,295 - OHPLBJKB_02583 0.82 -0.5
2,700,295 - OHPLBJKB_02583 0.82 -0.2
2,700,295 - OHPLBJKB_02583 0.82 -0.1
2,700,295 - OHPLBJKB_02583 0.82 -1.7
2,700,362 - OHPLBJKB_02583 0.86 -0.1
2,700,375 + OHPLBJKB_02583 0.87 +0.8
2,700,375 + OHPLBJKB_02583 0.87 +1.6
2,700,375 + OHPLBJKB_02583 0.87 -2.0
2,700,376 - OHPLBJKB_02583 0.87 -1.2
2,700,386 + OHPLBJKB_02583 0.88 -1.1
2,700,410 + OHPLBJKB_02583 0.89 +1.7
2,700,450 + +0.4
2,700,466 - -1.5
2,700,498 + -1.0
2,700,500 + -1.5
2,700,501 - -0.7
2,700,511 - -2.1
2,700,511 - +0.6
2,700,514 - -0.5
2,700,516 + +1.6
2,700,517 - +0.1
2,700,596 + -0.2
2,700,597 - -0.3
2,700,598 + +1.2
2,700,617 + +2.0
2,700,662 + -0.0
2,700,745 + +2.3
2,700,745 + -0.7
2,700,837 - OHPLBJKB_02584 0.20 -0.6
2,700,887 - OHPLBJKB_02584 0.25 -0.4
2,700,954 - OHPLBJKB_02584 0.32 +0.3
2,701,001 - OHPLBJKB_02584 0.37 +1.0
2,701,001 - OHPLBJKB_02584 0.37 +0.5
2,701,001 - OHPLBJKB_02584 0.37 -0.3
2,701,146 - OHPLBJKB_02584 0.53 -0.6
2,701,172 - OHPLBJKB_02584 0.55 +0.4
2,701,172 - OHPLBJKB_02584 0.55 +2.6
2,701,172 - OHPLBJKB_02584 0.55 -0.4
2,701,175 + OHPLBJKB_02584 0.56 -0.1
2,701,176 - OHPLBJKB_02584 0.56 +0.2
2,701,176 - OHPLBJKB_02584 0.56 +0.3
2,701,268 + OHPLBJKB_02584 0.65 +0.4
2,701,372 + OHPLBJKB_02584 0.77 -0.4
2,701,372 + OHPLBJKB_02584 0.77 +0.4
2,701,373 - OHPLBJKB_02584 0.77 -0.7
2,701,376 + OHPLBJKB_02584 0.77 +0.1
2,701,376 + OHPLBJKB_02584 0.77 +0.3
2,701,376 + OHPLBJKB_02584 0.77 -0.6
2,701,376 + OHPLBJKB_02584 0.77 +2.6
2,701,376 + OHPLBJKB_02584 0.77 +0.8
2,701,376 + OHPLBJKB_02584 0.77 +0.3
2,701,377 - OHPLBJKB_02584 0.77 -1.3
2,701,377 - OHPLBJKB_02584 0.77 +3.2
2,701,382 + OHPLBJKB_02584 0.78 -0.4
2,701,383 - OHPLBJKB_02584 0.78 -0.4
2,701,384 + OHPLBJKB_02584 0.78 +0.3
2,701,384 + OHPLBJKB_02584 0.78 +0.3
2,701,385 - OHPLBJKB_02584 0.78 +3.1
2,701,647 - -0.2
2,701,932 - OHPLBJKB_02585 0.31 -2.5
2,701,932 - OHPLBJKB_02585 0.31 +1.4
2,701,936 + OHPLBJKB_02585 0.31 +1.8
2,701,958 - OHPLBJKB_02585 0.33 -0.1
2,702,043 - OHPLBJKB_02585 0.41 -0.2
2,702,084 - OHPLBJKB_02585 0.45 -2.3
2,702,134 + OHPLBJKB_02585 0.49 +1.7
2,702,141 - OHPLBJKB_02585 0.50 -0.4
2,702,270 - OHPLBJKB_02585 0.62 -3.3
2,702,289 + OHPLBJKB_02585 0.63 -0.1
2,702,289 + OHPLBJKB_02585 0.63 +0.4
2,702,290 - OHPLBJKB_02585 0.64 -1.2
2,702,290 - OHPLBJKB_02585 0.64 -1.2
2,702,290 - OHPLBJKB_02585 0.64 +0.5
2,702,290 - OHPLBJKB_02585 0.64 -2.3
2,702,332 + OHPLBJKB_02585 0.67 +0.8
2,702,356 + OHPLBJKB_02585 0.70 -0.1
2,702,501 - OHPLBJKB_02585 0.83 -1.7
2,702,503 + OHPLBJKB_02585 0.83 +0.3
2,702,503 + OHPLBJKB_02585 0.83 +1.8

Or see this region's nucleotide sequence