Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02051

Experiment: bur MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02050 and OHPLBJKB_02051 are separated by 20 nucleotidesOHPLBJKB_02051 and OHPLBJKB_02052 are separated by 12 nucleotidesOHPLBJKB_02052 and OHPLBJKB_02053 are separated by 63 nucleotides OHPLBJKB_02050: OHPLBJKB_02050 - putative ferredoxin-like protein YdhY, at 2,126,143 to 2,126,769 _02050 OHPLBJKB_02051: OHPLBJKB_02051 - putative oxidoreductase YdhV, at 2,126,790 to 2,128,892 _02051 OHPLBJKB_02052: OHPLBJKB_02052 - putative protein YdhW, at 2,128,905 to 2,129,543 _02052 OHPLBJKB_02053: OHPLBJKB_02053 - putative ferredoxin-like protein YdhX, at 2,129,607 to 2,130,275 _02053 Position (kb) 2126 2127 2128 2129Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2125.904 kb on - strandat 2125.986 kb on + strandat 2126.166 kb on - strandat 2126.168 kb on + strandat 2126.168 kb on + strandat 2126.169 kb on - strandat 2126.202 kb on + strandat 2126.203 kb on - strandat 2126.303 kb on + strand, within OHPLBJKB_02050at 2126.303 kb on + strand, within OHPLBJKB_02050at 2126.307 kb on + strand, within OHPLBJKB_02050at 2126.376 kb on + strand, within OHPLBJKB_02050at 2126.437 kb on + strand, within OHPLBJKB_02050at 2126.437 kb on + strand, within OHPLBJKB_02050at 2126.586 kb on + strand, within OHPLBJKB_02050at 2126.586 kb on + strand, within OHPLBJKB_02050at 2126.587 kb on - strand, within OHPLBJKB_02050at 2126.587 kb on - strand, within OHPLBJKB_02050at 2126.589 kb on + strand, within OHPLBJKB_02050at 2126.611 kb on - strand, within OHPLBJKB_02050at 2126.632 kb on - strand, within OHPLBJKB_02050at 2126.661 kb on - strand, within OHPLBJKB_02050at 2126.814 kb on - strandat 2126.815 kb on + strandat 2126.843 kb on + strandat 2126.909 kb on + strandat 2126.914 kb on - strandat 2127.122 kb on + strand, within OHPLBJKB_02051at 2127.361 kb on + strand, within OHPLBJKB_02051at 2127.453 kb on + strand, within OHPLBJKB_02051at 2127.453 kb on + strand, within OHPLBJKB_02051at 2127.471 kb on - strand, within OHPLBJKB_02051at 2127.471 kb on - strand, within OHPLBJKB_02051at 2127.471 kb on - strand, within OHPLBJKB_02051at 2127.503 kb on + strand, within OHPLBJKB_02051at 2127.504 kb on - strand, within OHPLBJKB_02051at 2127.504 kb on - strand, within OHPLBJKB_02051at 2127.525 kb on + strand, within OHPLBJKB_02051at 2127.526 kb on - strand, within OHPLBJKB_02051at 2127.557 kb on + strand, within OHPLBJKB_02051at 2127.557 kb on + strand, within OHPLBJKB_02051at 2127.630 kb on - strand, within OHPLBJKB_02051at 2127.645 kb on - strand, within OHPLBJKB_02051at 2127.649 kb on - strand, within OHPLBJKB_02051at 2127.649 kb on - strand, within OHPLBJKB_02051at 2127.649 kb on - strand, within OHPLBJKB_02051at 2127.650 kb on + strand, within OHPLBJKB_02051at 2127.651 kb on - strand, within OHPLBJKB_02051at 2127.687 kb on + strand, within OHPLBJKB_02051at 2127.687 kb on + strand, within OHPLBJKB_02051at 2127.688 kb on - strand, within OHPLBJKB_02051at 2127.688 kb on - strand, within OHPLBJKB_02051at 2127.731 kb on + strand, within OHPLBJKB_02051at 2127.731 kb on + strand, within OHPLBJKB_02051at 2127.731 kb on + strand, within OHPLBJKB_02051at 2127.731 kb on + strand, within OHPLBJKB_02051at 2127.732 kb on - strand, within OHPLBJKB_02051at 2127.789 kb on - strand, within OHPLBJKB_02051at 2127.878 kb on + strand, within OHPLBJKB_02051at 2127.916 kb on + strand, within OHPLBJKB_02051at 2127.916 kb on + strand, within OHPLBJKB_02051at 2127.923 kb on + strand, within OHPLBJKB_02051at 2127.924 kb on - strand, within OHPLBJKB_02051at 2127.924 kb on - strand, within OHPLBJKB_02051at 2127.927 kb on + strand, within OHPLBJKB_02051at 2127.927 kb on + strand, within OHPLBJKB_02051at 2127.928 kb on - strand, within OHPLBJKB_02051at 2127.928 kb on - strand, within OHPLBJKB_02051at 2127.950 kb on + strand, within OHPLBJKB_02051at 2127.950 kb on + strand, within OHPLBJKB_02051at 2127.951 kb on - strand, within OHPLBJKB_02051at 2127.951 kb on - strand, within OHPLBJKB_02051at 2127.954 kb on + strand, within OHPLBJKB_02051at 2127.955 kb on - strand, within OHPLBJKB_02051at 2127.955 kb on - strand, within OHPLBJKB_02051at 2128.002 kb on + strand, within OHPLBJKB_02051at 2128.066 kb on - strand, within OHPLBJKB_02051at 2128.116 kb on + strand, within OHPLBJKB_02051at 2128.116 kb on + strand, within OHPLBJKB_02051at 2128.117 kb on - strand, within OHPLBJKB_02051at 2128.117 kb on - strand, within OHPLBJKB_02051at 2128.153 kb on - strand, within OHPLBJKB_02051at 2128.245 kb on - strand, within OHPLBJKB_02051at 2128.245 kb on - strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.250 kb on + strand, within OHPLBJKB_02051at 2128.251 kb on - strand, within OHPLBJKB_02051at 2128.251 kb on - strand, within OHPLBJKB_02051at 2128.251 kb on - strand, within OHPLBJKB_02051at 2128.251 kb on - strand, within OHPLBJKB_02051at 2128.251 kb on - strand, within OHPLBJKB_02051at 2128.251 kb on - strand, within OHPLBJKB_02051at 2128.277 kb on + strand, within OHPLBJKB_02051at 2128.278 kb on - strand, within OHPLBJKB_02051at 2128.292 kb on + strand, within OHPLBJKB_02051at 2128.380 kb on + strand, within OHPLBJKB_02051at 2128.407 kb on - strand, within OHPLBJKB_02051at 2128.410 kb on + strand, within OHPLBJKB_02051at 2128.411 kb on - strand, within OHPLBJKB_02051at 2128.411 kb on - strand, within OHPLBJKB_02051at 2128.415 kb on + strand, within OHPLBJKB_02051at 2128.415 kb on + strand, within OHPLBJKB_02051at 2128.416 kb on - strand, within OHPLBJKB_02051at 2128.464 kb on - strand, within OHPLBJKB_02051at 2128.588 kb on + strand, within OHPLBJKB_02051at 2128.607 kb on + strand, within OHPLBJKB_02051at 2128.608 kb on - strand, within OHPLBJKB_02051at 2128.652 kb on + strand, within OHPLBJKB_02051at 2128.776 kb on + strandat 2128.850 kb on + strandat 2128.851 kb on - strandat 2128.851 kb on - strandat 2128.851 kb on - strandat 2128.879 kb on + strandat 2128.879 kb on + strandat 2128.880 kb on - strandat 2128.880 kb on - strandat 2129.145 kb on - strand, within OHPLBJKB_02052at 2129.145 kb on - strand, within OHPLBJKB_02052at 2129.177 kb on + strand, within OHPLBJKB_02052at 2129.178 kb on - strand, within OHPLBJKB_02052at 2129.200 kb on - strand, within OHPLBJKB_02052at 2129.203 kb on - strand, within OHPLBJKB_02052at 2129.205 kb on + strand, within OHPLBJKB_02052at 2129.206 kb on - strand, within OHPLBJKB_02052at 2129.206 kb on - strand, within OHPLBJKB_02052at 2129.313 kb on + strand, within OHPLBJKB_02052at 2129.314 kb on - strand, within OHPLBJKB_02052at 2129.325 kb on + strand, within OHPLBJKB_02052at 2129.356 kb on - strand, within OHPLBJKB_02052at 2129.358 kb on + strand, within OHPLBJKB_02052at 2129.358 kb on + strand, within OHPLBJKB_02052at 2129.358 kb on + strand, within OHPLBJKB_02052at 2129.359 kb on - strand, within OHPLBJKB_02052at 2129.359 kb on - strand, within OHPLBJKB_02052at 2129.359 kb on - strand, within OHPLBJKB_02052at 2129.359 kb on - strand, within OHPLBJKB_02052at 2129.425 kb on + strand, within OHPLBJKB_02052at 2129.426 kb on - strand, within OHPLBJKB_02052at 2129.457 kb on + strand, within OHPLBJKB_02052at 2129.457 kb on + strand, within OHPLBJKB_02052at 2129.457 kb on + strand, within OHPLBJKB_02052at 2129.458 kb on - strand, within OHPLBJKB_02052at 2129.478 kb on - strand, within OHPLBJKB_02052at 2129.496 kb on + strandat 2129.497 kb on - strandat 2129.503 kb on + strandat 2129.504 kb on - strandat 2129.600 kb on + strandat 2129.757 kb on - strand, within OHPLBJKB_02053at 2129.819 kb on - strand, within OHPLBJKB_02053at 2129.859 kb on + strand, within OHPLBJKB_02053

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI1
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2,125,904 - +0.4
2,125,986 + +1.6
2,126,166 - -0.7
2,126,168 + +3.1
2,126,168 + -0.9
2,126,169 - +0.3
2,126,202 + -1.4
2,126,203 - +0.3
2,126,303 + OHPLBJKB_02050 0.26 +0.0
2,126,303 + OHPLBJKB_02050 0.26 -1.4
2,126,307 + OHPLBJKB_02050 0.26 +0.8
2,126,376 + OHPLBJKB_02050 0.37 +0.0
2,126,437 + OHPLBJKB_02050 0.47 -0.4
2,126,437 + OHPLBJKB_02050 0.47 +0.0
2,126,586 + OHPLBJKB_02050 0.71 +0.0
2,126,586 + OHPLBJKB_02050 0.71 +0.8
2,126,587 - OHPLBJKB_02050 0.71 +1.0
2,126,587 - OHPLBJKB_02050 0.71 -0.2
2,126,589 + OHPLBJKB_02050 0.71 +0.0
2,126,611 - OHPLBJKB_02050 0.75 +0.4
2,126,632 - OHPLBJKB_02050 0.78 -0.3
2,126,661 - OHPLBJKB_02050 0.83 +0.7
2,126,814 - +0.0
2,126,815 + +0.5
2,126,843 + -0.8
2,126,909 + -0.9
2,126,914 - -0.2
2,127,122 + OHPLBJKB_02051 0.16 -0.1
2,127,361 + OHPLBJKB_02051 0.27 +0.9
2,127,453 + OHPLBJKB_02051 0.32 -1.6
2,127,453 + OHPLBJKB_02051 0.32 -1.2
2,127,471 - OHPLBJKB_02051 0.32 -1.5
2,127,471 - OHPLBJKB_02051 0.32 +1.9
2,127,471 - OHPLBJKB_02051 0.32 +0.9
2,127,503 + OHPLBJKB_02051 0.34 +0.6
2,127,504 - OHPLBJKB_02051 0.34 +1.0
2,127,504 - OHPLBJKB_02051 0.34 -0.6
2,127,525 + OHPLBJKB_02051 0.35 +0.0
2,127,526 - OHPLBJKB_02051 0.35 +0.9
2,127,557 + OHPLBJKB_02051 0.36 +1.2
2,127,557 + OHPLBJKB_02051 0.36 +0.1
2,127,630 - OHPLBJKB_02051 0.40 -0.1
2,127,645 - OHPLBJKB_02051 0.41 +0.3
2,127,649 - OHPLBJKB_02051 0.41 +1.2
2,127,649 - OHPLBJKB_02051 0.41 +0.2
2,127,649 - OHPLBJKB_02051 0.41 -0.9
2,127,650 + OHPLBJKB_02051 0.41 -0.9
2,127,651 - OHPLBJKB_02051 0.41 -0.9
2,127,687 + OHPLBJKB_02051 0.43 +0.5
2,127,687 + OHPLBJKB_02051 0.43 +0.5
2,127,688 - OHPLBJKB_02051 0.43 -1.1
2,127,688 - OHPLBJKB_02051 0.43 +0.0
2,127,731 + OHPLBJKB_02051 0.45 -1.7
2,127,731 + OHPLBJKB_02051 0.45 -2.5
2,127,731 + OHPLBJKB_02051 0.45 +0.4
2,127,731 + OHPLBJKB_02051 0.45 -2.6
2,127,732 - OHPLBJKB_02051 0.45 +0.1
2,127,789 - OHPLBJKB_02051 0.48 -0.6
2,127,878 + OHPLBJKB_02051 0.52 +0.4
2,127,916 + OHPLBJKB_02051 0.54 -0.6
2,127,916 + OHPLBJKB_02051 0.54 -1.7
2,127,923 + OHPLBJKB_02051 0.54 -0.1
2,127,924 - OHPLBJKB_02051 0.54 -1.1
2,127,924 - OHPLBJKB_02051 0.54 -0.9
2,127,927 + OHPLBJKB_02051 0.54 -1.4
2,127,927 + OHPLBJKB_02051 0.54 -0.6
2,127,928 - OHPLBJKB_02051 0.54 -0.1
2,127,928 - OHPLBJKB_02051 0.54 +0.3
2,127,950 + OHPLBJKB_02051 0.55 -0.6
2,127,950 + OHPLBJKB_02051 0.55 -1.9
2,127,951 - OHPLBJKB_02051 0.55 +2.4
2,127,951 - OHPLBJKB_02051 0.55 -1.9
2,127,954 + OHPLBJKB_02051 0.55 -1.0
2,127,955 - OHPLBJKB_02051 0.55 -0.3
2,127,955 - OHPLBJKB_02051 0.55 -0.2
2,128,002 + OHPLBJKB_02051 0.58 +0.4
2,128,066 - OHPLBJKB_02051 0.61 -0.2
2,128,116 + OHPLBJKB_02051 0.63 -1.6
2,128,116 + OHPLBJKB_02051 0.63 -1.6
2,128,117 - OHPLBJKB_02051 0.63 -0.7
2,128,117 - OHPLBJKB_02051 0.63 +0.1
2,128,153 - OHPLBJKB_02051 0.65 +1.3
2,128,245 - OHPLBJKB_02051 0.69 +1.4
2,128,245 - OHPLBJKB_02051 0.69 +1.4
2,128,250 + OHPLBJKB_02051 0.69 -1.8
2,128,250 + OHPLBJKB_02051 0.69 -0.4
2,128,250 + OHPLBJKB_02051 0.69 +1.6
2,128,250 + OHPLBJKB_02051 0.69 +0.3
2,128,250 + OHPLBJKB_02051 0.69 +1.5
2,128,250 + OHPLBJKB_02051 0.69 +0.6
2,128,250 + OHPLBJKB_02051 0.69 +0.9
2,128,250 + OHPLBJKB_02051 0.69 -0.9
2,128,250 + OHPLBJKB_02051 0.69 +1.9
2,128,250 + OHPLBJKB_02051 0.69 -0.7
2,128,251 - OHPLBJKB_02051 0.69 +1.3
2,128,251 - OHPLBJKB_02051 0.69 +0.6
2,128,251 - OHPLBJKB_02051 0.69 +0.3
2,128,251 - OHPLBJKB_02051 0.69 -0.2
2,128,251 - OHPLBJKB_02051 0.69 -1.1
2,128,251 - OHPLBJKB_02051 0.69 -0.9
2,128,277 + OHPLBJKB_02051 0.71 -0.8
2,128,278 - OHPLBJKB_02051 0.71 +0.7
2,128,292 + OHPLBJKB_02051 0.71 +1.0
2,128,380 + OHPLBJKB_02051 0.76 +0.3
2,128,407 - OHPLBJKB_02051 0.77 +0.0
2,128,410 + OHPLBJKB_02051 0.77 +0.6
2,128,411 - OHPLBJKB_02051 0.77 -0.7
2,128,411 - OHPLBJKB_02051 0.77 +1.2
2,128,415 + OHPLBJKB_02051 0.77 -0.4
2,128,415 + OHPLBJKB_02051 0.77 -2.5
2,128,416 - OHPLBJKB_02051 0.77 -0.4
2,128,464 - OHPLBJKB_02051 0.80 -1.7
2,128,588 + OHPLBJKB_02051 0.85 -0.9
2,128,607 + OHPLBJKB_02051 0.86 +0.8
2,128,608 - OHPLBJKB_02051 0.86 -1.0
2,128,652 + OHPLBJKB_02051 0.89 -0.8
2,128,776 + -0.1
2,128,850 + +0.9
2,128,851 - +0.6
2,128,851 - +1.1
2,128,851 - -1.1
2,128,879 + +0.3
2,128,879 + -1.1
2,128,880 - -1.8
2,128,880 - -0.9
2,129,145 - OHPLBJKB_02052 0.38 -0.3
2,129,145 - OHPLBJKB_02052 0.38 +0.0
2,129,177 + OHPLBJKB_02052 0.43 +0.2
2,129,178 - OHPLBJKB_02052 0.43 +0.8
2,129,200 - OHPLBJKB_02052 0.46 -1.1
2,129,203 - OHPLBJKB_02052 0.47 +0.0
2,129,205 + OHPLBJKB_02052 0.47 -2.0
2,129,206 - OHPLBJKB_02052 0.47 -0.4
2,129,206 - OHPLBJKB_02052 0.47 -0.2
2,129,313 + OHPLBJKB_02052 0.64 -1.0
2,129,314 - OHPLBJKB_02052 0.64 -0.1
2,129,325 + OHPLBJKB_02052 0.66 -2.4
2,129,356 - OHPLBJKB_02052 0.71 +0.7
2,129,358 + OHPLBJKB_02052 0.71 -2.6
2,129,358 + OHPLBJKB_02052 0.71 -0.2
2,129,358 + OHPLBJKB_02052 0.71 +0.0
2,129,359 - OHPLBJKB_02052 0.71 +0.3
2,129,359 - OHPLBJKB_02052 0.71 +1.4
2,129,359 - OHPLBJKB_02052 0.71 -0.4
2,129,359 - OHPLBJKB_02052 0.71 -0.7
2,129,425 + OHPLBJKB_02052 0.81 +0.5
2,129,426 - OHPLBJKB_02052 0.82 +0.9
2,129,457 + OHPLBJKB_02052 0.86 +0.0
2,129,457 + OHPLBJKB_02052 0.86 +0.5
2,129,457 + OHPLBJKB_02052 0.86 -1.1
2,129,458 - OHPLBJKB_02052 0.87 +0.4
2,129,478 - OHPLBJKB_02052 0.90 +1.0
2,129,496 + -0.2
2,129,497 - -0.7
2,129,503 + +1.9
2,129,504 - -0.2
2,129,600 + +1.0
2,129,757 - OHPLBJKB_02053 0.22 +0.3
2,129,819 - OHPLBJKB_02053 0.32 -0.7
2,129,859 + OHPLBJKB_02053 0.38 +2.0

Or see this region's nucleotide sequence