Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00448

Experiment: bur MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00447 and OHPLBJKB_00448 overlap by 11 nucleotidesOHPLBJKB_00448 and OHPLBJKB_00449 are separated by 108 nucleotides OHPLBJKB_00447: OHPLBJKB_00447 - Sodium/pantothenate symporter, at 457,500 to 458,951 _00447 OHPLBJKB_00448: OHPLBJKB_00448 - putative membrane protein YhdT, at 458,941 to 459,183 _00448 OHPLBJKB_00449: OHPLBJKB_00449 - Biotin carboxylase, at 459,292 to 460,641 _00449 Position (kb) 458 459 460Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 458.014 kb on - strand, within OHPLBJKB_00447at 458.014 kb on - strand, within OHPLBJKB_00447at 458.014 kb on - strand, within OHPLBJKB_00447at 458.123 kb on + strand, within OHPLBJKB_00447at 458.162 kb on + strand, within OHPLBJKB_00447at 458.162 kb on + strand, within OHPLBJKB_00447at 458.162 kb on + strand, within OHPLBJKB_00447at 458.163 kb on - strand, within OHPLBJKB_00447at 458.163 kb on - strand, within OHPLBJKB_00447at 458.164 kb on + strand, within OHPLBJKB_00447at 458.164 kb on + strand, within OHPLBJKB_00447at 458.165 kb on - strand, within OHPLBJKB_00447at 458.172 kb on - strand, within OHPLBJKB_00447at 458.172 kb on - strand, within OHPLBJKB_00447at 458.172 kb on - strand, within OHPLBJKB_00447at 458.172 kb on - strand, within OHPLBJKB_00447at 458.238 kb on - strand, within OHPLBJKB_00447at 458.310 kb on + strand, within OHPLBJKB_00447at 458.310 kb on + strand, within OHPLBJKB_00447at 458.310 kb on + strand, within OHPLBJKB_00447at 458.311 kb on - strand, within OHPLBJKB_00447at 458.318 kb on + strand, within OHPLBJKB_00447at 458.318 kb on + strand, within OHPLBJKB_00447at 458.319 kb on - strand, within OHPLBJKB_00447at 458.340 kb on + strand, within OHPLBJKB_00447at 458.340 kb on + strand, within OHPLBJKB_00447at 458.340 kb on + strand, within OHPLBJKB_00447at 458.340 kb on + strand, within OHPLBJKB_00447at 458.341 kb on - strand, within OHPLBJKB_00447at 458.341 kb on - strand, within OHPLBJKB_00447at 458.341 kb on - strand, within OHPLBJKB_00447at 458.341 kb on - strand, within OHPLBJKB_00447at 458.344 kb on - strand, within OHPLBJKB_00447at 458.344 kb on - strand, within OHPLBJKB_00447at 458.344 kb on - strand, within OHPLBJKB_00447at 458.351 kb on + strand, within OHPLBJKB_00447at 458.351 kb on + strand, within OHPLBJKB_00447at 458.435 kb on + strand, within OHPLBJKB_00447at 458.435 kb on + strand, within OHPLBJKB_00447at 458.437 kb on + strand, within OHPLBJKB_00447at 458.437 kb on + strand, within OHPLBJKB_00447at 458.437 kb on + strand, within OHPLBJKB_00447at 458.437 kb on + strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.438 kb on - strand, within OHPLBJKB_00447at 458.439 kb on + strand, within OHPLBJKB_00447at 458.439 kb on + strand, within OHPLBJKB_00447at 458.439 kb on + strand, within OHPLBJKB_00447at 458.440 kb on - strand, within OHPLBJKB_00447at 458.440 kb on - strand, within OHPLBJKB_00447at 458.440 kb on - strand, within OHPLBJKB_00447at 458.440 kb on - strand, within OHPLBJKB_00447at 458.440 kb on - strand, within OHPLBJKB_00447at 458.479 kb on + strand, within OHPLBJKB_00447at 458.480 kb on - strand, within OHPLBJKB_00447at 458.523 kb on - strand, within OHPLBJKB_00447at 458.615 kb on + strand, within OHPLBJKB_00447at 458.639 kb on - strand, within OHPLBJKB_00447at 458.639 kb on - strand, within OHPLBJKB_00447at 458.738 kb on - strand, within OHPLBJKB_00447at 458.741 kb on + strand, within OHPLBJKB_00447at 458.741 kb on + strand, within OHPLBJKB_00447at 458.741 kb on + strand, within OHPLBJKB_00447at 458.742 kb on - strand, within OHPLBJKB_00447at 458.742 kb on - strand, within OHPLBJKB_00447at 458.742 kb on - strand, within OHPLBJKB_00447at 458.742 kb on - strand, within OHPLBJKB_00447at 458.744 kb on - strand, within OHPLBJKB_00447at 458.785 kb on + strand, within OHPLBJKB_00447at 458.785 kb on + strand, within OHPLBJKB_00447at 458.785 kb on + strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.786 kb on - strand, within OHPLBJKB_00447at 458.846 kb on - strandat 458.876 kb on + strandat 458.938 kb on - strandat 458.938 kb on - strandat 458.982 kb on + strand, within OHPLBJKB_00448at 459.119 kb on + strand, within OHPLBJKB_00448at 459.219 kb on + strandat 459.219 kb on + strandat 459.219 kb on + strandat 459.220 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI1
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458,014 - OHPLBJKB_00447 0.35 +2.1
458,014 - OHPLBJKB_00447 0.35 +0.7
458,014 - OHPLBJKB_00447 0.35 +1.0
458,123 + OHPLBJKB_00447 0.43 +0.0
458,162 + OHPLBJKB_00447 0.46 -2.8
458,162 + OHPLBJKB_00447 0.46 -0.1
458,162 + OHPLBJKB_00447 0.46 +2.5
458,163 - OHPLBJKB_00447 0.46 +1.2
458,163 - OHPLBJKB_00447 0.46 -0.6
458,164 + OHPLBJKB_00447 0.46 -1.2
458,164 + OHPLBJKB_00447 0.46 +0.4
458,165 - OHPLBJKB_00447 0.46 +1.4
458,172 - OHPLBJKB_00447 0.46 +0.3
458,172 - OHPLBJKB_00447 0.46 -2.0
458,172 - OHPLBJKB_00447 0.46 +0.2
458,172 - OHPLBJKB_00447 0.46 -1.2
458,238 - OHPLBJKB_00447 0.51 -0.7
458,310 + OHPLBJKB_00447 0.56 -1.1
458,310 + OHPLBJKB_00447 0.56 -0.2
458,310 + OHPLBJKB_00447 0.56 -0.4
458,311 - OHPLBJKB_00447 0.56 -1.7
458,318 + OHPLBJKB_00447 0.56 -1.9
458,318 + OHPLBJKB_00447 0.56 -1.8
458,319 - OHPLBJKB_00447 0.56 -1.8
458,340 + OHPLBJKB_00447 0.58 +1.1
458,340 + OHPLBJKB_00447 0.58 +0.5
458,340 + OHPLBJKB_00447 0.58 +1.0
458,340 + OHPLBJKB_00447 0.58 +0.2
458,341 - OHPLBJKB_00447 0.58 -3.1
458,341 - OHPLBJKB_00447 0.58 -0.8
458,341 - OHPLBJKB_00447 0.58 +7.1
458,341 - OHPLBJKB_00447 0.58 +0.3
458,344 - OHPLBJKB_00447 0.58 -1.4
458,344 - OHPLBJKB_00447 0.58 -0.8
458,344 - OHPLBJKB_00447 0.58 -0.6
458,351 + OHPLBJKB_00447 0.59 -0.9
458,351 + OHPLBJKB_00447 0.59 -1.9
458,435 + OHPLBJKB_00447 0.64 -1.4
458,435 + OHPLBJKB_00447 0.64 -1.4
458,437 + OHPLBJKB_00447 0.65 -0.1
458,437 + OHPLBJKB_00447 0.65 -0.2
458,437 + OHPLBJKB_00447 0.65 +1.7
458,437 + OHPLBJKB_00447 0.65 +0.3
458,438 - OHPLBJKB_00447 0.65 -0.3
458,438 - OHPLBJKB_00447 0.65 -0.7
458,438 - OHPLBJKB_00447 0.65 +0.9
458,438 - OHPLBJKB_00447 0.65 +0.5
458,438 - OHPLBJKB_00447 0.65 -1.1
458,438 - OHPLBJKB_00447 0.65 -1.1
458,438 - OHPLBJKB_00447 0.65 +0.0
458,438 - OHPLBJKB_00447 0.65 -0.1
458,439 + OHPLBJKB_00447 0.65 -2.8
458,439 + OHPLBJKB_00447 0.65 +0.3
458,439 + OHPLBJKB_00447 0.65 -0.8
458,440 - OHPLBJKB_00447 0.65 +0.4
458,440 - OHPLBJKB_00447 0.65 -0.4
458,440 - OHPLBJKB_00447 0.65 +0.2
458,440 - OHPLBJKB_00447 0.65 -2.2
458,440 - OHPLBJKB_00447 0.65 +0.6
458,479 + OHPLBJKB_00447 0.67 -1.6
458,480 - OHPLBJKB_00447 0.67 -0.2
458,523 - OHPLBJKB_00447 0.70 -0.1
458,615 + OHPLBJKB_00447 0.77 -0.1
458,639 - OHPLBJKB_00447 0.78 +0.1
458,639 - OHPLBJKB_00447 0.78 -0.4
458,738 - OHPLBJKB_00447 0.85 -0.7
458,741 + OHPLBJKB_00447 0.85 -0.1
458,741 + OHPLBJKB_00447 0.85 -1.0
458,741 + OHPLBJKB_00447 0.85 -1.1
458,742 - OHPLBJKB_00447 0.86 -1.1
458,742 - OHPLBJKB_00447 0.86 +0.7
458,742 - OHPLBJKB_00447 0.86 +1.6
458,742 - OHPLBJKB_00447 0.86 +2.2
458,744 - OHPLBJKB_00447 0.86 +0.7
458,785 + OHPLBJKB_00447 0.88 -2.2
458,785 + OHPLBJKB_00447 0.88 -0.5
458,785 + OHPLBJKB_00447 0.88 -2.5
458,786 - OHPLBJKB_00447 0.89 -1.5
458,786 - OHPLBJKB_00447 0.89 -2.2
458,786 - OHPLBJKB_00447 0.89 -0.2
458,786 - OHPLBJKB_00447 0.89 -0.1
458,786 - OHPLBJKB_00447 0.89 +0.3
458,786 - OHPLBJKB_00447 0.89 +0.3
458,786 - OHPLBJKB_00447 0.89 +0.6
458,786 - OHPLBJKB_00447 0.89 +1.8
458,786 - OHPLBJKB_00447 0.89 +0.1
458,786 - OHPLBJKB_00447 0.89 +1.3
458,786 - OHPLBJKB_00447 0.89 -2.1
458,786 - OHPLBJKB_00447 0.89 -0.8
458,846 - +0.9
458,876 + -0.1
458,938 - +1.3
458,938 - +0.7
458,982 + OHPLBJKB_00448 0.17 +1.6
459,119 + OHPLBJKB_00448 0.73 -0.1
459,219 + -0.3
459,219 + +0.7
459,219 + -0.1
459,220 - -0.3

Or see this region's nucleotide sequence