Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00677 and EFB2_00678 are separated by 49 nucleotides EFB2_00678 and EFB2_00679 are separated by 54 nucleotides EFB2_00679 and EFB2_00680 overlap by 11 nucleotides EFB2_00680 and EFB2_00681 are separated by 38 nucleotides
EFB2_00677: EFB2_00677 - Ribosomal RNA small subunit methyltransferase I, at 683,907 to 684,770
_00677
EFB2_00678: EFB2_00678 - Glucosamine-6-phosphate deaminase, at 684,820 to 685,533
_00678
EFB2_00679: EFB2_00679 - PTS system mannose-specific EIID component, at 685,588 to 686,379
_00679
EFB2_00680: EFB2_00680 - N-acetylgalactosamine permease IIC component 1, at 686,369 to 687,172
_00680
EFB2_00681: EFB2_00681 - PTS system sorbose-specific EIIB component, at 687,211 to 687,687
_00681
Position (kb) 685
686
687 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 684.612 kb on - strand, within EFB2_00677 at 684.665 kb on - strand, within EFB2_00677 at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.738 kb on + strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.739 kb on - strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.740 kb on + strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.741 kb on - strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.744 kb on + strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.745 kb on - strand at 684.772 kb on + strand at 684.772 kb on + strand at 684.772 kb on + strand at 684.772 kb on + strand at 684.772 kb on + strand at 684.773 kb on - strand at 684.773 kb on - strand at 684.773 kb on - strand at 684.792 kb on + strand at 684.798 kb on + strand at 684.798 kb on + strand at 684.798 kb on + strand at 684.798 kb on + strand at 684.798 kb on + strand at 684.799 kb on - strand at 684.799 kb on - strand at 684.799 kb on - strand at 684.799 kb on - strand at 684.809 kb on + strand at 684.810 kb on - strand at 684.810 kb on - strand at 684.810 kb on - strand at 684.861 kb on + strand at 684.861 kb on + strand at 684.861 kb on + strand at 684.861 kb on + strand at 684.871 kb on + strand at 684.872 kb on - strand at 684.955 kb on + strand, within EFB2_00678 at 684.955 kb on + strand, within EFB2_00678 at 684.955 kb on + strand, within EFB2_00678 at 684.955 kb on + strand, within EFB2_00678 at 684.956 kb on - strand, within EFB2_00678 at 684.981 kb on + strand, within EFB2_00678 at 684.982 kb on - strand, within EFB2_00678 at 684.982 kb on - strand, within EFB2_00678 at 684.982 kb on - strand, within EFB2_00678 at 684.994 kb on + strand, within EFB2_00678 at 684.994 kb on + strand, within EFB2_00678 at 684.995 kb on - strand, within EFB2_00678 at 684.995 kb on - strand, within EFB2_00678 at 685.033 kb on + strand, within EFB2_00678 at 685.074 kb on + strand, within EFB2_00678 at 685.075 kb on - strand, within EFB2_00678 at 685.075 kb on - strand, within EFB2_00678 at 685.075 kb on - strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.150 kb on + strand, within EFB2_00678 at 685.151 kb on - strand, within EFB2_00678 at 685.151 kb on - strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.210 kb on + strand, within EFB2_00678 at 685.211 kb on - strand, within EFB2_00678 at 685.211 kb on - strand, within EFB2_00678 at 685.249 kb on + strand, within EFB2_00678 at 685.249 kb on + strand, within EFB2_00678 at 685.250 kb on - strand, within EFB2_00678 at 685.250 kb on - strand, within EFB2_00678 at 685.250 kb on - strand, within EFB2_00678 at 685.250 kb on - strand, within EFB2_00678 at 685.250 kb on - strand, within EFB2_00678 at 685.269 kb on + strand, within EFB2_00678 at 685.270 kb on - strand, within EFB2_00678 at 685.296 kb on + strand, within EFB2_00678 at 685.296 kb on + strand, within EFB2_00678 at 685.296 kb on + strand, within EFB2_00678 at 685.297 kb on - strand, within EFB2_00678 at 685.297 kb on - strand, within EFB2_00678 at 685.310 kb on - strand, within EFB2_00678 at 685.394 kb on + strand, within EFB2_00678 at 685.394 kb on + strand, within EFB2_00678 at 685.394 kb on + strand, within EFB2_00678 at 685.394 kb on + strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.395 kb on - strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.400 kb on + strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.401 kb on - strand, within EFB2_00678 at 685.409 kb on - strand, within EFB2_00678 at 685.471 kb on + strand at 685.471 kb on + strand at 685.472 kb on - strand at 685.472 kb on - strand at 685.472 kb on - strand at 685.475 kb on + strand at 685.475 kb on + strand at 685.476 kb on - strand at 685.495 kb on + strand at 685.496 kb on - strand at 685.496 kb on - strand at 685.505 kb on + strand at 685.505 kb on + strand at 685.505 kb on + strand at 685.505 kb on + strand at 685.505 kb on + strand at 685.506 kb on - strand at 685.506 kb on - strand at 685.506 kb on - strand at 685.506 kb on - strand at 685.506 kb on - strand at 685.506 kb on - strand at 685.506 kb on - strand at 685.548 kb on + strand at 685.549 kb on - strand at 685.549 kb on - strand at 685.552 kb on + strand at 685.552 kb on + strand at 685.552 kb on + strand at 685.552 kb on + strand at 685.552 kb on + strand at 685.552 kb on + strand at 685.552 kb on + strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.553 kb on - strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.617 kb on + strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.618 kb on - strand at 685.619 kb on + strand at 685.642 kb on + strand at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.679 kb on + strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.680 kb on - strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.682 kb on + strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.683 kb on - strand, within EFB2_00679 at 685.697 kb on + strand, within EFB2_00679 at 685.697 kb on + strand, within EFB2_00679 at 685.697 kb on + strand, within EFB2_00679 at 685.698 kb on - strand, within EFB2_00679 at 685.698 kb on - strand, within EFB2_00679 at 685.698 kb on - strand, within EFB2_00679 at 685.698 kb on - strand, within EFB2_00679 at 685.698 kb on - strand, within EFB2_00679 at 685.708 kb on + strand, within EFB2_00679 at 685.714 kb on - strand, within EFB2_00679 at 685.764 kb on + strand, within EFB2_00679 at 685.794 kb on + strand, within EFB2_00679 at 685.794 kb on + strand, within EFB2_00679 at 685.794 kb on + strand, within EFB2_00679 at 685.795 kb on - strand, within EFB2_00679 at 685.795 kb on - strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.797 kb on + strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.798 kb on - strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.805 kb on + strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.806 kb on - strand, within EFB2_00679 at 685.950 kb on + strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.951 kb on - strand, within EFB2_00679 at 685.958 kb on + strand, within EFB2_00679 at 685.959 kb on - strand, within EFB2_00679 at 686.028 kb on + strand, within EFB2_00679 at 686.028 kb on + strand, within EFB2_00679 at 686.028 kb on + strand, within EFB2_00679 at 686.028 kb on + strand, within EFB2_00679 at 686.028 kb on + strand, within EFB2_00679 at 686.028 kb on + strand, within EFB2_00679 at 686.029 kb on - strand, within EFB2_00679 at 686.029 kb on - strand, within EFB2_00679 at 686.043 kb on + strand, within EFB2_00679 at 686.043 kb on + strand, within EFB2_00679 at 686.043 kb on + strand, within EFB2_00679 at 686.044 kb on - strand, within EFB2_00679 at 686.044 kb on - strand, within EFB2_00679 at 686.044 kb on - strand, within EFB2_00679 at 686.106 kb on + strand, within EFB2_00679 at 686.107 kb on - strand, within EFB2_00679 at 686.146 kb on + strand, within EFB2_00679 at 686.146 kb on + strand, within EFB2_00679 at 686.147 kb on - strand, within EFB2_00679 at 686.147 kb on - strand, within EFB2_00679 at 686.150 kb on - strand, within EFB2_00679 at 686.150 kb on - strand, within EFB2_00679 at 686.175 kb on + strand, within EFB2_00679 at 686.175 kb on + strand, within EFB2_00679 at 686.175 kb on + strand, within EFB2_00679 at 686.176 kb on - strand, within EFB2_00679 at 686.176 kb on - strand, within EFB2_00679 at 686.176 kb on - strand, within EFB2_00679 at 686.176 kb on - strand, within EFB2_00679 at 686.176 kb on - strand, within EFB2_00679 at 686.184 kb on + strand, within EFB2_00679 at 686.184 kb on + strand, within EFB2_00679 at 686.184 kb on + strand, within EFB2_00679 at 686.184 kb on + strand, within EFB2_00679 at 686.185 kb on - strand, within EFB2_00679 at 686.185 kb on - strand, within EFB2_00679 at 686.185 kb on - strand, within EFB2_00679 at 686.185 kb on - strand, within EFB2_00679 at 686.187 kb on + strand, within EFB2_00679 at 686.187 kb on + strand, within EFB2_00679 at 686.187 kb on + strand, within EFB2_00679 at 686.187 kb on + strand, within EFB2_00679 at 686.187 kb on + strand, within EFB2_00679 at 686.188 kb on - strand, within EFB2_00679 at 686.188 kb on - strand, within EFB2_00679 at 686.188 kb on - strand, within EFB2_00679 at 686.191 kb on - strand, within EFB2_00679 at 686.202 kb on + strand, within EFB2_00679 at 686.202 kb on + strand, within EFB2_00679 at 686.221 kb on + strand, within EFB2_00679 at 686.222 kb on - strand, within EFB2_00679 at 686.222 kb on - strand, within EFB2_00679 at 686.241 kb on + strand, within EFB2_00679 at 686.241 kb on + strand, within EFB2_00679 at 686.241 kb on + strand, within EFB2_00679 at 686.241 kb on + strand, within EFB2_00679 at 686.241 kb on + strand, within EFB2_00679 at 686.242 kb on - strand, within EFB2_00679 at 686.242 kb on - strand, within EFB2_00679 at 686.242 kb on - strand, within EFB2_00679 at 686.242 kb on - strand, within EFB2_00679 at 686.242 kb on - strand, within EFB2_00679 at 686.242 kb on - strand, within EFB2_00679 at 686.243 kb on + strand, within EFB2_00679 at 686.243 kb on + strand, within EFB2_00679 at 686.243 kb on + strand, within EFB2_00679 at 686.243 kb on + strand, within EFB2_00679 at 686.244 kb on - strand, within EFB2_00679 at 686.244 kb on - strand, within EFB2_00679 at 686.244 kb on - strand, within EFB2_00679 at 686.244 kb on - strand, within EFB2_00679 at 686.244 kb on - strand, within EFB2_00679 at 686.277 kb on + strand, within EFB2_00679 at 686.303 kb on + strand at 686.304 kb on - strand at 686.304 kb on - strand at 686.304 kb on - strand at 686.304 kb on - strand at 686.304 kb on - strand at 686.304 kb on - strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.320 kb on + strand at 686.320 kb on + strand at 686.320 kb on + strand at 686.320 kb on + strand at 686.320 kb on + strand at 686.320 kb on + strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.321 kb on - strand at 686.352 kb on + strand at 686.352 kb on + strand at 686.352 kb on + strand at 686.353 kb on - strand at 686.353 kb on - strand at 686.353 kb on - strand at 686.385 kb on + strand at 686.385 kb on + strand at 686.385 kb on + strand at 686.385 kb on + strand at 686.385 kb on + strand at 686.385 kb on + strand at 686.386 kb on - strand at 686.386 kb on - strand at 686.386 kb on - strand at 686.386 kb on - strand at 686.404 kb on + strand at 686.460 kb on + strand, within EFB2_00680 at 686.460 kb on + strand, within EFB2_00680 at 686.460 kb on + strand, within EFB2_00680 at 686.461 kb on - strand, within EFB2_00680 at 686.461 kb on - strand, within EFB2_00680 at 686.461 kb on - strand, within EFB2_00680 at 686.461 kb on - strand, within EFB2_00680 at 686.461 kb on - strand, within EFB2_00680 at 686.517 kb on + strand, within EFB2_00680 at 686.517 kb on + strand, within EFB2_00680 at 686.517 kb on + strand, within EFB2_00680 at 686.517 kb on + strand, within EFB2_00680 at 686.517 kb on + strand, within EFB2_00680 at 686.518 kb on - strand, within EFB2_00680 at 686.518 kb on - strand, within EFB2_00680 at 686.518 kb on - strand, within EFB2_00680 at 686.518 kb on - strand, within EFB2_00680 at 686.518 kb on - strand, within EFB2_00680 at 686.547 kb on + strand, within EFB2_00680 at 686.547 kb on + strand, within EFB2_00680 at 686.547 kb on + strand, within EFB2_00680 at 686.548 kb on - strand, within EFB2_00680 at 686.548 kb on - strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.554 kb on + strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.555 kb on - strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.556 kb on + strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.557 kb on - strand, within EFB2_00680 at 686.611 kb on + strand, within EFB2_00680 at 686.611 kb on + strand, within EFB2_00680 at 686.611 kb on + strand, within EFB2_00680 at 686.611 kb on + strand, within EFB2_00680 at 686.611 kb on + strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.612 kb on - strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.691 kb on + strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.692 kb on - strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.695 kb on + strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.696 kb on - strand, within EFB2_00680 at 686.718 kb on + strand, within EFB2_00680 at 686.718 kb on + strand, within EFB2_00680 at 686.718 kb on + strand, within EFB2_00680 at 686.718 kb on + strand, within EFB2_00680 at 686.719 kb on - strand, within EFB2_00680 at 686.719 kb on - strand, within EFB2_00680 at 686.719 kb on - strand, within EFB2_00680 at 686.752 kb on + strand, within EFB2_00680 at 686.752 kb on + strand, within EFB2_00680 at 686.752 kb on + strand, within EFB2_00680 at 686.753 kb on - strand, within EFB2_00680 at 686.753 kb on - strand, within EFB2_00680 at 686.753 kb on - strand, within EFB2_00680 at 686.753 kb on - strand, within EFB2_00680 at 686.795 kb on - strand, within EFB2_00680 at 686.795 kb on - strand, within EFB2_00680 at 686.809 kb on + strand, within EFB2_00680 at 686.809 kb on + strand, within EFB2_00680 at 686.810 kb on - strand, within EFB2_00680 at 686.810 kb on - strand, within EFB2_00680 at 686.813 kb on + strand, within EFB2_00680 at 686.814 kb on - strand, within EFB2_00680 at 686.814 kb on - strand, within EFB2_00680 at 686.814 kb on - strand, within EFB2_00680 at 686.814 kb on - strand, within EFB2_00680 at 686.829 kb on + strand, within EFB2_00680 at 686.830 kb on - strand, within EFB2_00680 at 686.830 kb on - strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.847 kb on + strand, within EFB2_00680 at 686.848 kb on - strand, within EFB2_00680 at 686.848 kb on - strand, within EFB2_00680 at 686.848 kb on - strand, within EFB2_00680 at 686.848 kb on - strand, within EFB2_00680 at 686.848 kb on - strand, within EFB2_00680 at 686.848 kb on - strand, within EFB2_00680 at 686.863 kb on + strand, within EFB2_00680 at 686.863 kb on + strand, within EFB2_00680 at 686.863 kb on + strand, within EFB2_00680 at 686.944 kb on + strand, within EFB2_00680 at 686.945 kb on - strand, within EFB2_00680 at 686.947 kb on + strand, within EFB2_00680 at 686.947 kb on + strand, within EFB2_00680 at 686.947 kb on + strand, within EFB2_00680 at 687.017 kb on - strand, within EFB2_00680 at 687.020 kb on + strand, within EFB2_00680 at 687.021 kb on - strand, within EFB2_00680 at 687.021 kb on - strand, within EFB2_00680 at 687.021 kb on - strand, within EFB2_00680 at 687.034 kb on + strand, within EFB2_00680 at 687.035 kb on - strand, within EFB2_00680 at 687.046 kb on + strand, within EFB2_00680 at 687.055 kb on + strand, within EFB2_00680 at 687.056 kb on - strand, within EFB2_00680 at 687.128 kb on + strand at 687.161 kb on + strand at 687.161 kb on + strand at 687.207 kb on - strand at 687.289 kb on + strand, within EFB2_00681 at 687.361 kb on - strand, within EFB2_00681
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) remove 684,612 - EFB2_00677 0.82 -1.5 684,665 - EFB2_00677 0.88 -0.9 684,738 + -3.9 684,738 + +0.4 684,738 + +0.3 684,738 + +1.2 684,738 + -1.2 684,738 + -2.4 684,738 + -0.3 684,738 + -2.6 684,738 + +0.3 684,738 + -1.7 684,738 + -1.7 684,739 - +1.3 684,739 - -1.9 684,739 - +0.8 684,739 - -3.0 684,739 - -1.7 684,739 - -0.5 684,739 - +0.9 684,739 - -0.0 684,739 - -1.4 684,740 + -1.6 684,740 + +0.6 684,740 + -1.6 684,740 + -1.4 684,740 + -2.1 684,740 + -0.4 684,740 + +0.8 684,740 + -0.2 684,740 + +0.3 684,740 + +1.3 684,740 + +0.7 684,740 + -1.9 684,740 + -0.5 684,740 + +0.2 684,740 + -0.1 684,740 + +0.7 684,740 + +0.2 684,740 + -0.2 684,740 + +0.6 684,740 + +1.5 684,740 + +1.1 684,740 + +3.6 684,740 + -1.6 684,740 + +0.6 684,740 + -1.0 684,740 + -1.2 684,740 + -0.1 684,740 + +1.9 684,740 + -0.6 684,740 + -0.5 684,740 + -1.8 684,740 + -0.4 684,740 + -1.3 684,740 + -1.2 684,740 + +0.7 684,740 + +2.1 684,740 + -0.7 684,740 + -1.5 684,740 + -0.4 684,741 - 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Or see this region's nucleotide sequence