Experiment: Arabinoxylan (Rye Flour) 0.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05198 and BACOVA_05199 are separated by 43 nucleotides BACOVA_05199 and BACOVA_05200 are separated by 3 nucleotides
BACOVA_05198: BACOVA_05198 - tetratricopeptide repeat protein, at 697,472 to 698,797
_05198
BACOVA_05199: BACOVA_05199 - hypothetical protein, at 698,841 to 699,455
_05199
BACOVA_05200: BACOVA_05200 - CBS domain protein, at 699,459 to 700,715
_05200
Position (kb) 698
699
700 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 699.468 kb on + strand at 699.468 kb on + strand at 699.471 kb on - strand at 699.471 kb on - strand at 699.579 kb on - strand at 699.597 kb on - strand, within BACOVA_05200 at 699.629 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.666 kb on + strand, within BACOVA_05200 at 699.667 kb on - strand, within BACOVA_05200 at 699.671 kb on + strand, within BACOVA_05200 at 699.671 kb on + strand, within BACOVA_05200 at 699.672 kb on - strand, within BACOVA_05200 at 699.723 kb on - strand, within BACOVA_05200 at 699.768 kb on - strand, within BACOVA_05200 at 699.770 kb on + strand, within BACOVA_05200 at 699.770 kb on + strand, within BACOVA_05200 at 699.864 kb on + strand, within BACOVA_05200 at 699.865 kb on - strand, within BACOVA_05200 at 699.874 kb on + strand, within BACOVA_05200 at 699.877 kb on - strand, within BACOVA_05200 at 699.881 kb on + strand, within BACOVA_05200 at 699.941 kb on + strand, within BACOVA_05200 at 700.197 kb on + strand, within BACOVA_05200 at 700.198 kb on - strand, within BACOVA_05200 at 700.227 kb on + strand, within BACOVA_05200 at 700.230 kb on - strand, within BACOVA_05200 at 700.320 kb on - strand, within BACOVA_05200 at 700.337 kb on + strand, within BACOVA_05200 at 700.338 kb on - strand, within BACOVA_05200 at 700.386 kb on - strand, within BACOVA_05200 at 700.399 kb on + strand, within BACOVA_05200 at 700.426 kb on + strand, within BACOVA_05200 at 700.436 kb on + strand, within BACOVA_05200
Per-strain Table
Position Strand Gene LocusTag Fraction Arabinoxylan (Rye Flour) 0.5 mg/mL (C) remove 699,468 + -0.2 699,468 + -0.8 699,471 - +0.7 699,471 - +0.0 699,579 - +0.7 699,597 - BACOVA_05200 0.11 -1.0 699,629 + BACOVA_05200 0.14 -1.0 699,666 + BACOVA_05200 0.16 +0.1 699,666 + BACOVA_05200 0.16 -3.0 699,666 + BACOVA_05200 0.16 -0.7 699,666 + BACOVA_05200 0.16 +0.2 699,667 - BACOVA_05200 0.17 -1.6 699,671 + BACOVA_05200 0.17 -1.0 699,671 + BACOVA_05200 0.17 +0.6 699,672 - BACOVA_05200 0.17 +1.3 699,723 - BACOVA_05200 0.21 +0.4 699,768 - BACOVA_05200 0.25 +0.2 699,770 + BACOVA_05200 0.25 +1.1 699,770 + BACOVA_05200 0.25 -1.7 699,864 + BACOVA_05200 0.32 +0.5 699,865 - BACOVA_05200 0.32 -1.5 699,874 + BACOVA_05200 0.33 -2.0 699,877 - BACOVA_05200 0.33 -0.2 699,881 + BACOVA_05200 0.34 -1.8 699,941 + BACOVA_05200 0.38 +0.0 700,197 + BACOVA_05200 0.59 -1.6 700,198 - BACOVA_05200 0.59 -2.2 700,227 + BACOVA_05200 0.61 -0.5 700,230 - BACOVA_05200 0.61 -3.3 700,320 - BACOVA_05200 0.68 -0.7 700,337 + BACOVA_05200 0.70 +0.0 700,338 - BACOVA_05200 0.70 -1.2 700,386 - BACOVA_05200 0.74 -1.4 700,399 + BACOVA_05200 0.75 -0.3 700,426 + BACOVA_05200 0.77 -0.6 700,436 + BACOVA_05200 0.78 -0.8
Or see this region's nucleotide sequence