Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04271

Experiment: bur MOI10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_04270 and OHPLBJKB_04271 are separated by 11 nucleotidesOHPLBJKB_04271 and OHPLBJKB_04272 are separated by 9 nucleotides OHPLBJKB_04270: OHPLBJKB_04270 - Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase, at 4,488,567 to 4,489,670 _04270 OHPLBJKB_04271: OHPLBJKB_04271 - hypothetical protein, at 4,489,682 to 4,489,900 _04271 OHPLBJKB_04272: OHPLBJKB_04272 - Transcription termination factor Rho, at 4,489,910 to 4,491,169 _04272 Position (kb) 4489 4490Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 4488.777 kb on - strand, within OHPLBJKB_04270at 4488.803 kb on + strand, within OHPLBJKB_04270at 4488.803 kb on + strand, within OHPLBJKB_04270at 4488.834 kb on - strand, within OHPLBJKB_04270at 4488.883 kb on + strand, within OHPLBJKB_04270at 4488.883 kb on + strand, within OHPLBJKB_04270at 4488.884 kb on - strand, within OHPLBJKB_04270at 4488.884 kb on - strand, within OHPLBJKB_04270at 4488.884 kb on - strand, within OHPLBJKB_04270at 4488.887 kb on + strand, within OHPLBJKB_04270at 4488.887 kb on + strand, within OHPLBJKB_04270at 4488.887 kb on + strand, within OHPLBJKB_04270at 4488.887 kb on + strand, within OHPLBJKB_04270at 4488.887 kb on + strand, within OHPLBJKB_04270at 4488.887 kb on + strand, within OHPLBJKB_04270at 4488.888 kb on - strand, within OHPLBJKB_04270at 4488.888 kb on - strand, within OHPLBJKB_04270at 4488.996 kb on - strand, within OHPLBJKB_04270at 4488.996 kb on - strand, within OHPLBJKB_04270at 4489.075 kb on + strand, within OHPLBJKB_04270at 4489.075 kb on + strand, within OHPLBJKB_04270at 4489.075 kb on + strand, within OHPLBJKB_04270at 4489.075 kb on + strand, within OHPLBJKB_04270at 4489.075 kb on + strand, within OHPLBJKB_04270at 4489.075 kb on + strand, within OHPLBJKB_04270at 4489.076 kb on - strand, within OHPLBJKB_04270at 4489.076 kb on - strand, within OHPLBJKB_04270at 4489.076 kb on - strand, within OHPLBJKB_04270at 4489.224 kb on - strand, within OHPLBJKB_04270at 4489.245 kb on + strand, within OHPLBJKB_04270at 4489.259 kb on - strand, within OHPLBJKB_04270at 4489.298 kb on + strand, within OHPLBJKB_04270at 4489.298 kb on + strand, within OHPLBJKB_04270at 4489.298 kb on + strand, within OHPLBJKB_04270at 4489.298 kb on + strand, within OHPLBJKB_04270at 4489.299 kb on - strand, within OHPLBJKB_04270at 4489.299 kb on - strand, within OHPLBJKB_04270at 4489.299 kb on - strand, within OHPLBJKB_04270at 4489.299 kb on - strand, within OHPLBJKB_04270at 4489.300 kb on + strand, within OHPLBJKB_04270at 4489.301 kb on - strand, within OHPLBJKB_04270at 4489.310 kb on + strand, within OHPLBJKB_04270at 4489.318 kb on + strand, within OHPLBJKB_04270at 4489.318 kb on + strand, within OHPLBJKB_04270at 4489.319 kb on - strand, within OHPLBJKB_04270at 4489.319 kb on - strand, within OHPLBJKB_04270at 4489.319 kb on - strand, within OHPLBJKB_04270at 4489.319 kb on - strand, within OHPLBJKB_04270at 4489.319 kb on - strand, within OHPLBJKB_04270at 4489.340 kb on + strand, within OHPLBJKB_04270at 4489.341 kb on - strand, within OHPLBJKB_04270at 4489.362 kb on + strand, within OHPLBJKB_04270at 4489.362 kb on + strand, within OHPLBJKB_04270at 4489.363 kb on - strand, within OHPLBJKB_04270at 4489.363 kb on - strand, within OHPLBJKB_04270at 4489.363 kb on - strand, within OHPLBJKB_04270at 4489.363 kb on - strand, within OHPLBJKB_04270at 4489.444 kb on + strand, within OHPLBJKB_04270at 4489.444 kb on + strand, within OHPLBJKB_04270at 4489.444 kb on + strand, within OHPLBJKB_04270at 4489.445 kb on - strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.452 kb on + strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.453 kb on - strand, within OHPLBJKB_04270at 4489.464 kb on - strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.465 kb on + strand, within OHPLBJKB_04270at 4489.466 kb on - strand, within OHPLBJKB_04270at 4489.466 kb on - strand, within OHPLBJKB_04270at 4489.466 kb on - strand, within OHPLBJKB_04270at 4489.466 kb on - strand, within OHPLBJKB_04270at 4489.469 kb on - strand, within OHPLBJKB_04270at 4489.469 kb on - strand, within OHPLBJKB_04270at 4489.530 kb on + strand, within OHPLBJKB_04270at 4489.531 kb on - strand, within OHPLBJKB_04270at 4489.635 kb on - strandat 4489.635 kb on - strandat 4489.649 kb on + strandat 4489.649 kb on + strandat 4489.650 kb on - strandat 4489.650 kb on - strandat 4489.650 kb on - strandat 4489.693 kb on + strandat 4489.694 kb on - strandat 4489.705 kb on + strand, within OHPLBJKB_04271at 4489.705 kb on + strand, within OHPLBJKB_04271at 4489.705 kb on + strand, within OHPLBJKB_04271at 4489.706 kb on - strand, within OHPLBJKB_04271at 4489.706 kb on - strand, within OHPLBJKB_04271at 4489.706 kb on - strand, within OHPLBJKB_04271at 4489.706 kb on - strand, within OHPLBJKB_04271at 4489.706 kb on - strand, within OHPLBJKB_04271at 4489.847 kb on - strand, within OHPLBJKB_04271at 4489.847 kb on - strand, within OHPLBJKB_04271at 4489.853 kb on - strand, within OHPLBJKB_04271at 4489.858 kb on + strand, within OHPLBJKB_04271at 4489.858 kb on + strand, within OHPLBJKB_04271at 4489.858 kb on + strand, within OHPLBJKB_04271at 4489.858 kb on + strand, within OHPLBJKB_04271at 4489.858 kb on + strand, within OHPLBJKB_04271at 4489.859 kb on - strand, within OHPLBJKB_04271at 4489.859 kb on - strand, within OHPLBJKB_04271at 4489.860 kb on + strand, within OHPLBJKB_04271at 4489.860 kb on + strand, within OHPLBJKB_04271at 4489.860 kb on + strand, within OHPLBJKB_04271at 4489.861 kb on - strand, within OHPLBJKB_04271at 4489.861 kb on - strand, within OHPLBJKB_04271at 4489.861 kb on - strand, within OHPLBJKB_04271at 4489.861 kb on - strand, within OHPLBJKB_04271at 4489.878 kb on + strand, within OHPLBJKB_04271at 4489.879 kb on - strandat 4489.900 kb on + strandat 4489.900 kb on + strandat 4489.901 kb on - strandat 4489.912 kb on - strandat 4489.912 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI10
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4,488,777 - OHPLBJKB_04270 0.19 -0.5
4,488,803 + OHPLBJKB_04270 0.21 -0.3
4,488,803 + OHPLBJKB_04270 0.21 -1.2
4,488,834 - OHPLBJKB_04270 0.24 -0.1
4,488,883 + OHPLBJKB_04270 0.29 +0.1
4,488,883 + OHPLBJKB_04270 0.29 -1.5
4,488,884 - OHPLBJKB_04270 0.29 -0.1
4,488,884 - OHPLBJKB_04270 0.29 +0.0
4,488,884 - OHPLBJKB_04270 0.29 +0.5
4,488,887 + OHPLBJKB_04270 0.29 +0.6
4,488,887 + OHPLBJKB_04270 0.29 +0.4
4,488,887 + OHPLBJKB_04270 0.29 +1.1
4,488,887 + OHPLBJKB_04270 0.29 -2.7
4,488,887 + OHPLBJKB_04270 0.29 +0.2
4,488,887 + OHPLBJKB_04270 0.29 +1.4
4,488,888 - OHPLBJKB_04270 0.29 -1.0
4,488,888 - OHPLBJKB_04270 0.29 +0.7
4,488,996 - OHPLBJKB_04270 0.39 +1.1
4,488,996 - OHPLBJKB_04270 0.39 +0.3
4,489,075 + OHPLBJKB_04270 0.46 -0.1
4,489,075 + OHPLBJKB_04270 0.46 -0.9
4,489,075 + OHPLBJKB_04270 0.46 -1.4
4,489,075 + OHPLBJKB_04270 0.46 +0.6
4,489,075 + OHPLBJKB_04270 0.46 -1.1
4,489,075 + OHPLBJKB_04270 0.46 +1.5
4,489,076 - OHPLBJKB_04270 0.46 +0.2
4,489,076 - OHPLBJKB_04270 0.46 -0.6
4,489,076 - OHPLBJKB_04270 0.46 -0.5
4,489,224 - OHPLBJKB_04270 0.60 -0.9
4,489,245 + OHPLBJKB_04270 0.61 +0.2
4,489,259 - OHPLBJKB_04270 0.63 +0.7
4,489,298 + OHPLBJKB_04270 0.66 +1.2
4,489,298 + OHPLBJKB_04270 0.66 +0.6
4,489,298 + OHPLBJKB_04270 0.66 -0.7
4,489,298 + OHPLBJKB_04270 0.66 -0.4
4,489,299 - OHPLBJKB_04270 0.66 +1.1
4,489,299 - OHPLBJKB_04270 0.66 +1.1
4,489,299 - OHPLBJKB_04270 0.66 +1.2
4,489,299 - OHPLBJKB_04270 0.66 -2.9
4,489,300 + OHPLBJKB_04270 0.66 -0.6
4,489,301 - OHPLBJKB_04270 0.66 -0.2
4,489,310 + OHPLBJKB_04270 0.67 -0.0
4,489,318 + OHPLBJKB_04270 0.68 +0.3
4,489,318 + OHPLBJKB_04270 0.68 -0.1
4,489,319 - OHPLBJKB_04270 0.68 +0.6
4,489,319 - OHPLBJKB_04270 0.68 -1.5
4,489,319 - OHPLBJKB_04270 0.68 -0.0
4,489,319 - OHPLBJKB_04270 0.68 -0.3
4,489,319 - OHPLBJKB_04270 0.68 -0.9
4,489,340 + OHPLBJKB_04270 0.70 -0.0
4,489,341 - OHPLBJKB_04270 0.70 -0.2
4,489,362 + OHPLBJKB_04270 0.72 -0.4
4,489,362 + OHPLBJKB_04270 0.72 -1.9
4,489,363 - OHPLBJKB_04270 0.72 +0.8
4,489,363 - OHPLBJKB_04270 0.72 -0.8
4,489,363 - OHPLBJKB_04270 0.72 +1.3
4,489,363 - OHPLBJKB_04270 0.72 -0.4
4,489,444 + OHPLBJKB_04270 0.79 -2.0
4,489,444 + OHPLBJKB_04270 0.79 -0.1
4,489,444 + OHPLBJKB_04270 0.79 -0.7
4,489,445 - OHPLBJKB_04270 0.80 +0.5
4,489,452 + OHPLBJKB_04270 0.80 +0.3
4,489,452 + OHPLBJKB_04270 0.80 -0.1
4,489,452 + OHPLBJKB_04270 0.80 +0.4
4,489,452 + OHPLBJKB_04270 0.80 -0.4
4,489,452 + OHPLBJKB_04270 0.80 +0.4
4,489,452 + OHPLBJKB_04270 0.80 +0.0
4,489,452 + OHPLBJKB_04270 0.80 -0.5
4,489,452 + OHPLBJKB_04270 0.80 +0.2
4,489,452 + OHPLBJKB_04270 0.80 +0.8
4,489,452 + OHPLBJKB_04270 0.80 -1.0
4,489,453 - OHPLBJKB_04270 0.80 -0.8
4,489,453 - OHPLBJKB_04270 0.80 -0.8
4,489,453 - OHPLBJKB_04270 0.80 -0.6
4,489,453 - OHPLBJKB_04270 0.80 -0.6
4,489,453 - OHPLBJKB_04270 0.80 -0.1
4,489,453 - OHPLBJKB_04270 0.80 -0.2
4,489,453 - OHPLBJKB_04270 0.80 -1.2
4,489,453 - OHPLBJKB_04270 0.80 +0.2
4,489,453 - OHPLBJKB_04270 0.80 +0.5
4,489,453 - OHPLBJKB_04270 0.80 -0.6
4,489,453 - OHPLBJKB_04270 0.80 +5.6
4,489,453 - OHPLBJKB_04270 0.80 -1.5
4,489,453 - OHPLBJKB_04270 0.80 +0.6
4,489,453 - OHPLBJKB_04270 0.80 -0.8
4,489,453 - OHPLBJKB_04270 0.80 +1.6
4,489,464 - OHPLBJKB_04270 0.81 +0.4
4,489,465 + OHPLBJKB_04270 0.81 -2.4
4,489,465 + OHPLBJKB_04270 0.81 -0.2
4,489,465 + OHPLBJKB_04270 0.81 +0.3
4,489,465 + OHPLBJKB_04270 0.81 +0.0
4,489,465 + OHPLBJKB_04270 0.81 +0.5
4,489,465 + OHPLBJKB_04270 0.81 +0.5
4,489,465 + OHPLBJKB_04270 0.81 -0.6
4,489,465 + OHPLBJKB_04270 0.81 +1.3
4,489,466 - OHPLBJKB_04270 0.81 -0.4
4,489,466 - OHPLBJKB_04270 0.81 -0.4
4,489,466 - OHPLBJKB_04270 0.81 +0.1
4,489,466 - OHPLBJKB_04270 0.81 -1.0
4,489,469 - OHPLBJKB_04270 0.82 -0.8
4,489,469 - OHPLBJKB_04270 0.82 -0.1
4,489,530 + OHPLBJKB_04270 0.87 -2.0
4,489,531 - OHPLBJKB_04270 0.87 -0.4
4,489,635 - -1.4
4,489,635 - +0.1
4,489,649 + +0.9
4,489,649 + +0.5
4,489,650 - +0.3
4,489,650 - +0.2
4,489,650 - -0.5
4,489,693 + -1.8
4,489,694 - +2.1
4,489,705 + OHPLBJKB_04271 0.11 +0.3
4,489,705 + OHPLBJKB_04271 0.11 +0.3
4,489,705 + OHPLBJKB_04271 0.11 -1.8
4,489,706 - OHPLBJKB_04271 0.11 +0.8
4,489,706 - OHPLBJKB_04271 0.11 -2.6
4,489,706 - OHPLBJKB_04271 0.11 -0.9
4,489,706 - OHPLBJKB_04271 0.11 +1.5
4,489,706 - OHPLBJKB_04271 0.11 +0.3
4,489,847 - OHPLBJKB_04271 0.75 +0.0
4,489,847 - OHPLBJKB_04271 0.75 -0.4
4,489,853 - OHPLBJKB_04271 0.78 -0.2
4,489,858 + OHPLBJKB_04271 0.80 +0.5
4,489,858 + OHPLBJKB_04271 0.80 +0.2
4,489,858 + OHPLBJKB_04271 0.80 -1.1
4,489,858 + OHPLBJKB_04271 0.80 -1.3
4,489,858 + OHPLBJKB_04271 0.80 -0.3
4,489,859 - OHPLBJKB_04271 0.81 +0.3
4,489,859 - OHPLBJKB_04271 0.81 -1.1
4,489,860 + OHPLBJKB_04271 0.81 -1.3
4,489,860 + OHPLBJKB_04271 0.81 -0.5
4,489,860 + OHPLBJKB_04271 0.81 +0.8
4,489,861 - OHPLBJKB_04271 0.82 -0.1
4,489,861 - OHPLBJKB_04271 0.82 +0.8
4,489,861 - OHPLBJKB_04271 0.82 -0.2
4,489,861 - OHPLBJKB_04271 0.82 +0.2
4,489,878 + OHPLBJKB_04271 0.89 -1.0
4,489,879 - -0.6
4,489,900 + +0.2
4,489,900 + -1.5
4,489,901 - +0.1
4,489,912 - -0.6
4,489,912 - -1.2

Or see this region's nucleotide sequence