Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891)

Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04206

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	bur MOI10
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4,422,441	+	OHPLBJKB_04204	0.89	-1.1
4,422,441	+	OHPLBJKB_04204	0.89	+4.8
4,422,547	+			+0.1
4,422,609	+			+0.4
4,422,610	-			-0.6
4,422,610	-			+0.4
4,422,610	-			-1.4
4,422,635	-			+0.6
4,422,812	+	OHPLBJKB_04205	0.29	-0.7
4,422,814	+	OHPLBJKB_04205	0.29	+0.3
4,422,814	+	OHPLBJKB_04205	0.29	-0.3
4,422,814	+	OHPLBJKB_04205	0.29	-0.7
4,422,815	-	OHPLBJKB_04205	0.30	-0.7
4,422,830	+	OHPLBJKB_04205	0.32	-0.2
4,422,830	+	OHPLBJKB_04205	0.32	-1.6
4,422,831	-	OHPLBJKB_04205	0.32	+0.1
4,422,831	-	OHPLBJKB_04205	0.32	-0.6
4,422,831	-	OHPLBJKB_04205	0.32	-1.1
4,422,831	-	OHPLBJKB_04205	0.32	+0.0
4,422,831	-	OHPLBJKB_04205	0.32	-0.7
4,422,831	-	OHPLBJKB_04205	0.32	-0.3
4,422,832	+	OHPLBJKB_04205	0.32	-0.8
4,422,832	+	OHPLBJKB_04205	0.32	-0.6
4,422,833	-	OHPLBJKB_04205	0.33	+1.5
4,422,930	+	OHPLBJKB_04205	0.48	-2.1
4,422,931	-	OHPLBJKB_04205	0.48	-0.8
4,422,941	-	OHPLBJKB_04205	0.50	+1.2
4,422,941	-	OHPLBJKB_04205	0.50	-0.2
4,422,951	+	OHPLBJKB_04205	0.52	-1.7
4,422,988	-	OHPLBJKB_04205	0.58	-1.6
4,423,179	+	OHPLBJKB_04205	0.89	+0.5
4,423,233	+			-0.5
4,423,416	+	OHPLBJKB_04206	0.13	-1.5
4,423,416	+	OHPLBJKB_04206	0.13	-0.6
4,423,416	+	OHPLBJKB_04206	0.13	+0.2
4,423,416	+	OHPLBJKB_04206	0.13	-0.3
4,423,416	+	OHPLBJKB_04206	0.13	+0.8
4,423,417	-	OHPLBJKB_04206	0.13	-0.6
4,423,417	-	OHPLBJKB_04206	0.13	-1.3
4,423,417	-	OHPLBJKB_04206	0.13	-0.5
4,423,417	-	OHPLBJKB_04206	0.13	-1.8
4,423,417	-	OHPLBJKB_04206	0.13	+0.5
4,423,417	-	OHPLBJKB_04206	0.13	+0.9
4,423,436	+	OHPLBJKB_04206	0.14	-2.4
4,423,526	-	OHPLBJKB_04206	0.21	+0.0
4,423,582	+	OHPLBJKB_04206	0.25	-0.3
4,423,583	-	OHPLBJKB_04206	0.25	-0.2
4,423,583	-	OHPLBJKB_04206	0.25	+0.5
4,423,627	+	OHPLBJKB_04206	0.29	-0.4
4,423,648	+	OHPLBJKB_04206	0.30	-1.4
4,423,648	+	OHPLBJKB_04206	0.30	-0.9
4,423,648	+	OHPLBJKB_04206	0.30	-2.2
4,423,649	-	OHPLBJKB_04206	0.30	+0.6
4,423,649	-	OHPLBJKB_04206	0.30	-0.6
4,423,689	+	OHPLBJKB_04206	0.33	+1.3
4,423,698	+	OHPLBJKB_04206	0.34	-1.4
4,423,698	+	OHPLBJKB_04206	0.34	-0.2
4,423,699	-	OHPLBJKB_04206	0.34	-0.8
4,423,699	-	OHPLBJKB_04206	0.34	+0.5
4,423,699	-	OHPLBJKB_04206	0.34	-0.8
4,423,699	-	OHPLBJKB_04206	0.34	-0.3
4,423,699	-	OHPLBJKB_04206	0.34	-0.5
4,423,749	-	OHPLBJKB_04206	0.38	-0.8
4,423,749	-	OHPLBJKB_04206	0.38	-0.4
4,423,749	-	OHPLBJKB_04206	0.38	-0.8
4,423,825	+	OHPLBJKB_04206	0.43	-0.7
4,423,826	-	OHPLBJKB_04206	0.43	-0.2
4,423,827	+	OHPLBJKB_04206	0.44	-0.8
4,423,827	+	OHPLBJKB_04206	0.44	-1.4
4,423,827	+	OHPLBJKB_04206	0.44	+0.7
4,423,828	-	OHPLBJKB_04206	0.44	-1.0
4,423,894	-	OHPLBJKB_04206	0.49	-2.8
4,423,894	-	OHPLBJKB_04206	0.49	+1.1
4,423,894	-	OHPLBJKB_04206	0.49	+0.6
4,423,939	-	OHPLBJKB_04206	0.52	-1.1
4,423,939	-	OHPLBJKB_04206	0.52	-0.4
4,423,939	-	OHPLBJKB_04206	0.52	+0.3
4,423,939	-	OHPLBJKB_04206	0.52	+1.5
4,423,943	+	OHPLBJKB_04206	0.52	-0.3
4,423,943	+	OHPLBJKB_04206	0.52	-0.8
4,423,944	-	OHPLBJKB_04206	0.52	-0.8
4,423,944	-	OHPLBJKB_04206	0.52	+1.0
4,423,977	+	OHPLBJKB_04206	0.55	-2.7
4,423,977	+	OHPLBJKB_04206	0.55	-0.1
4,424,071	+	OHPLBJKB_04206	0.62	+0.4
4,424,071	+	OHPLBJKB_04206	0.62	+0.5
4,424,071	+	OHPLBJKB_04206	0.62	+0.8
4,424,072	-	OHPLBJKB_04206	0.62	+0.2
4,424,085	+	OHPLBJKB_04206	0.63	-1.1
4,424,109	+	OHPLBJKB_04206	0.65	-0.4
4,424,110	-	OHPLBJKB_04206	0.65	-0.4
4,424,110	-	OHPLBJKB_04206	0.65	-3.0
4,424,194	+	OHPLBJKB_04206	0.71	-0.1
4,424,331	+	OHPLBJKB_04206	0.81	+0.1
4,424,332	-	OHPLBJKB_04206	0.81	-0.7
4,424,332	-	OHPLBJKB_04206	0.81	-0.1
4,424,428	+	OHPLBJKB_04206	0.89	-0.3
4,424,483	-			+0.5
4,424,486	+			+0.3
4,424,486	+			-0.5
4,424,487	-			-0.5
4,424,534	+			+1.1
4,424,539	+			+1.7
4,424,539	+			+0.3
4,424,539	+			+0.1
4,424,539	+			+0.7
4,424,539	+			-1.3
4,424,539	+			-1.9
4,424,540	-			+0.7
4,424,540	-			+1.6
4,424,540	-			-1.0
4,424,540	-			-0.9
4,424,543	+			-1.0
4,424,543	+			-1.4
4,424,543	+			-0.5
4,424,543	+			-1.4
4,424,543	+			+0.1
4,424,543	+			-0.3
4,424,544	-			+0.4
4,424,544	-			-1.4
4,424,544	-			+0.4
4,424,544	-			-0.0
4,424,544	-			+0.4
4,424,546	-			-0.2
4,424,605	+			-1.0
4,424,605	+			-1.2
4,424,606	-			-0.3
4,424,606	-			-0.2
4,424,606	-			-0.5
4,424,606	-			+0.0
4,424,620	+			-0.6
4,424,774	+			+0.0
4,424,774	+			-0.7
4,424,774	+			+0.8
4,424,774	+			+0.5
4,424,775	-			-0.2
4,424,792	+			+0.3
4,424,793	-			+1.3
4,424,793	-			-1.0
4,424,829	+			-0.9
4,424,829	+			-1.7
4,424,830	-			+0.4
4,424,830	-			-0.8
4,424,851	+			-1.2
4,424,851	+			-0.5
4,424,854	+			-0.7
4,424,938	-			+0.2
4,424,938	-			+0.2
4,424,938	-			+1.2
4,424,938	-			+0.7
4,425,018	+	OHPLBJKB_04207	0.11	+0.0
4,425,018	+	OHPLBJKB_04207	0.11	-1.2
4,425,019	-	OHPLBJKB_04207	0.11	+0.4
4,425,019	-	OHPLBJKB_04207	0.11	+0.6
4,425,019	-	OHPLBJKB_04207	0.11	-0.0
4,425,019	-	OHPLBJKB_04207	0.11	-0.6
4,425,101	+	OHPLBJKB_04207	0.15	-0.0
4,425,101	+	OHPLBJKB_04207	0.15	+0.7
4,425,222	+	OHPLBJKB_04207	0.21	-1.9
4,425,222	+	OHPLBJKB_04207	0.21	+0.4
4,425,222	+	OHPLBJKB_04207	0.21	+0.6
4,425,223	-	OHPLBJKB_04207	0.21	+0.4
4,425,226	+	OHPLBJKB_04207	0.21	-0.2
4,425,226	+	OHPLBJKB_04207	0.21	+1.4
4,425,226	+	OHPLBJKB_04207	0.21	+0.9
4,425,226	+	OHPLBJKB_04207	0.21	+1.1
4,425,226	+	OHPLBJKB_04207	0.21	-0.3
4,425,227	-	OHPLBJKB_04207	0.21	-0.9
4,425,227	-	OHPLBJKB_04207	0.21	-0.9
4,425,227	-	OHPLBJKB_04207	0.21	+2.4
4,425,235	+	OHPLBJKB_04207	0.21	+0.5
4,425,235	+	OHPLBJKB_04207	0.21	-1.5
4,425,235	+	OHPLBJKB_04207	0.21	+0.8
4,425,235	+	OHPLBJKB_04207	0.21	-0.2
4,425,236	-	OHPLBJKB_04207	0.21	-0.2
4,425,327	+	OHPLBJKB_04207	0.26	-0.1

Or see this region's nucleotide sequence