Experiment: bur MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03521 and OHPLBJKB_03522 are separated by 104 nucleotides OHPLBJKB_03522 and OHPLBJKB_03523 are separated by 122 nucleotides OHPLBJKB_03523 and OHPLBJKB_03524 are separated by 254 nucleotides
OHPLBJKB_03521: OHPLBJKB_03521 - putative fimbrial-like protein YadN, at 3,686,531 to 3,687,115
_03521
OHPLBJKB_03522: OHPLBJKB_03522 - putative fimbrial chaperone YadV, at 3,687,220 to 3,687,960
_03522
OHPLBJKB_03523: OHPLBJKB_03523 - hypothetical protein, at 3,688,083 to 3,688,361
_03523
OHPLBJKB_03524: OHPLBJKB_03524 - IS3 family transposase ISEhe3, at 3,688,616 to 3,689,230
_03524
Position (kb)
3687
3688 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 3686.258 kb on + strand at 3686.260 kb on + strand at 3686.446 kb on + strand at 3686.545 kb on - strand at 3686.619 kb on + strand, within OHPLBJKB_03521 at 3686.620 kb on - strand, within OHPLBJKB_03521 at 3686.644 kb on + strand, within OHPLBJKB_03521 at 3686.644 kb on + strand, within OHPLBJKB_03521 at 3686.645 kb on - strand, within OHPLBJKB_03521 at 3686.674 kb on + strand, within OHPLBJKB_03521 at 3686.812 kb on + strand, within OHPLBJKB_03521 at 3686.815 kb on + strand, within OHPLBJKB_03521 at 3686.821 kb on + strand, within OHPLBJKB_03521 at 3686.821 kb on + strand, within OHPLBJKB_03521 at 3686.855 kb on - strand, within OHPLBJKB_03521 at 3686.884 kb on + strand, within OHPLBJKB_03521 at 3686.885 kb on - strand, within OHPLBJKB_03521 at 3686.978 kb on + strand, within OHPLBJKB_03521 at 3686.978 kb on + strand, within OHPLBJKB_03521 at 3686.979 kb on - strand, within OHPLBJKB_03521 at 3686.979 kb on - strand, within OHPLBJKB_03521 at 3686.979 kb on - strand, within OHPLBJKB_03521 at 3687.096 kb on - strand at 3687.241 kb on - strand at 3687.328 kb on - strand, within OHPLBJKB_03522 at 3687.407 kb on - strand, within OHPLBJKB_03522 at 3687.438 kb on + strand, within OHPLBJKB_03522 at 3687.438 kb on + strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.439 kb on - strand, within OHPLBJKB_03522 at 3687.506 kb on + strand, within OHPLBJKB_03522 at 3687.507 kb on - strand, within OHPLBJKB_03522 at 3687.511 kb on + strand, within OHPLBJKB_03522 at 3687.512 kb on - strand, within OHPLBJKB_03522 at 3687.535 kb on - strand, within OHPLBJKB_03522 at 3687.567 kb on - strand, within OHPLBJKB_03522 at 3687.643 kb on - strand, within OHPLBJKB_03522 at 3687.643 kb on - strand, within OHPLBJKB_03522 at 3687.643 kb on - strand, within OHPLBJKB_03522 at 3687.644 kb on + strand, within OHPLBJKB_03522 at 3687.644 kb on + strand, within OHPLBJKB_03522 at 3687.645 kb on - strand, within OHPLBJKB_03522 at 3687.655 kb on + strand, within OHPLBJKB_03522 at 3687.767 kb on - strand, within OHPLBJKB_03522 at 3687.767 kb on - strand, within OHPLBJKB_03522 at 3687.767 kb on - strand, within OHPLBJKB_03522 at 3687.769 kb on + strand, within OHPLBJKB_03522 at 3687.769 kb on + strand, within OHPLBJKB_03522 at 3687.769 kb on + strand, within OHPLBJKB_03522 at 3687.770 kb on - strand, within OHPLBJKB_03522 at 3687.770 kb on - strand, within OHPLBJKB_03522 at 3687.770 kb on - strand, within OHPLBJKB_03522 at 3687.770 kb on - strand, within OHPLBJKB_03522 at 3687.770 kb on - strand, within OHPLBJKB_03522 at 3687.770 kb on - strand, within OHPLBJKB_03522 at 3687.802 kb on - strand, within OHPLBJKB_03522 at 3687.847 kb on - strand, within OHPLBJKB_03522 at 3687.959 kb on - strand at 3687.959 kb on - strand at 3687.972 kb on + strand at 3687.972 kb on + strand at 3687.973 kb on - strand at 3687.973 kb on - strand at 3687.991 kb on + strand at 3688.003 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI10 remove 3,686,258 + -2.3 3,686,260 + +0.2 3,686,446 + -0.7 3,686,545 - +0.1 3,686,619 + OHPLBJKB_03521 0.15 -1.6 3,686,620 - OHPLBJKB_03521 0.15 +0.2 3,686,644 + OHPLBJKB_03521 0.19 -1.4 3,686,644 + OHPLBJKB_03521 0.19 +0.2 3,686,645 - OHPLBJKB_03521 0.19 +0.3 3,686,674 + OHPLBJKB_03521 0.24 +0.3 3,686,812 + OHPLBJKB_03521 0.48 -0.0 3,686,815 + OHPLBJKB_03521 0.49 -0.5 3,686,821 + OHPLBJKB_03521 0.50 +3.0 3,686,821 + OHPLBJKB_03521 0.50 -2.1 3,686,855 - OHPLBJKB_03521 0.55 -1.0 3,686,884 + OHPLBJKB_03521 0.60 -0.2 3,686,885 - OHPLBJKB_03521 0.61 +0.6 3,686,978 + OHPLBJKB_03521 0.76 -0.7 3,686,978 + OHPLBJKB_03521 0.76 +0.3 3,686,979 - OHPLBJKB_03521 0.77 +0.1 3,686,979 - OHPLBJKB_03521 0.77 -2.5 3,686,979 - OHPLBJKB_03521 0.77 -0.0 3,687,096 - -0.9 3,687,241 - +0.7 3,687,328 - OHPLBJKB_03522 0.15 +1.2 3,687,407 - OHPLBJKB_03522 0.25 -0.6 3,687,438 + OHPLBJKB_03522 0.29 -0.6 3,687,438 + OHPLBJKB_03522 0.29 -1.2 3,687,439 - OHPLBJKB_03522 0.30 +0.5 3,687,439 - OHPLBJKB_03522 0.30 -0.2 3,687,439 - OHPLBJKB_03522 0.30 +0.9 3,687,439 - OHPLBJKB_03522 0.30 +0.5 3,687,439 - OHPLBJKB_03522 0.30 -0.5 3,687,439 - OHPLBJKB_03522 0.30 -0.3 3,687,439 - OHPLBJKB_03522 0.30 -0.4 3,687,439 - OHPLBJKB_03522 0.30 +0.9 3,687,506 + OHPLBJKB_03522 0.39 +0.8 3,687,507 - OHPLBJKB_03522 0.39 +0.1 3,687,511 + OHPLBJKB_03522 0.39 +0.6 3,687,512 - OHPLBJKB_03522 0.39 -1.4 3,687,535 - OHPLBJKB_03522 0.43 +0.9 3,687,567 - OHPLBJKB_03522 0.47 +1.2 3,687,643 - OHPLBJKB_03522 0.57 +0.1 3,687,643 - OHPLBJKB_03522 0.57 +0.4 3,687,643 - OHPLBJKB_03522 0.57 +1.2 3,687,644 + OHPLBJKB_03522 0.57 -0.2 3,687,644 + OHPLBJKB_03522 0.57 -0.2 3,687,645 - OHPLBJKB_03522 0.57 +0.5 3,687,655 + OHPLBJKB_03522 0.59 -0.7 3,687,767 - OHPLBJKB_03522 0.74 -0.5 3,687,767 - OHPLBJKB_03522 0.74 +2.6 3,687,767 - OHPLBJKB_03522 0.74 +0.9 3,687,769 + OHPLBJKB_03522 0.74 -0.7 3,687,769 + OHPLBJKB_03522 0.74 +0.7 3,687,769 + OHPLBJKB_03522 0.74 +1.4 3,687,770 - OHPLBJKB_03522 0.74 +2.1 3,687,770 - OHPLBJKB_03522 0.74 +0.1 3,687,770 - OHPLBJKB_03522 0.74 +0.7 3,687,770 - OHPLBJKB_03522 0.74 +6.4 3,687,770 - OHPLBJKB_03522 0.74 +0.8 3,687,770 - OHPLBJKB_03522 0.74 +1.6 3,687,802 - OHPLBJKB_03522 0.79 -1.0 3,687,847 - OHPLBJKB_03522 0.85 -2.1 3,687,959 - +0.5 3,687,959 - +0.8 3,687,972 + -1.7 3,687,972 + +0.6 3,687,973 - -1.4 3,687,973 - -0.1 3,687,991 + +1.1 3,688,003 - +1.6
Or see this region's nucleotide sequence