Experiment: bur MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01947 and OHPLBJKB_01948 are separated by 146 nucleotides OHPLBJKB_01948 and OHPLBJKB_01949 are separated by 112 nucleotides
OHPLBJKB_01947: OHPLBJKB_01947 - putative diguanylate cyclase CdgI, at 2,020,789 to 2,022,264
_01947
OHPLBJKB_01948: OHPLBJKB_01948 - hypothetical protein, at 2,022,411 to 2,023,694
_01948
OHPLBJKB_01949: OHPLBJKB_01949 - hypothetical protein, at 2,023,807 to 2,025,741
_01949
Position (kb)
2022
2023
2024 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2021.447 kb on - strand, within OHPLBJKB_01947 at 2021.455 kb on + strand, within OHPLBJKB_01947 at 2021.497 kb on - strand, within OHPLBJKB_01947 at 2021.595 kb on - strand, within OHPLBJKB_01947 at 2021.613 kb on + strand, within OHPLBJKB_01947 at 2021.868 kb on + strand, within OHPLBJKB_01947 at 2022.039 kb on - strand, within OHPLBJKB_01947 at 2022.064 kb on + strand, within OHPLBJKB_01947 at 2022.247 kb on - strand at 2022.337 kb on + strand at 2022.337 kb on + strand at 2022.347 kb on - strand at 2022.350 kb on - strand at 2022.513 kb on - strand at 2022.574 kb on + strand, within OHPLBJKB_01948 at 2022.574 kb on + strand, within OHPLBJKB_01948 at 2022.574 kb on + strand, within OHPLBJKB_01948 at 2022.575 kb on - strand, within OHPLBJKB_01948 at 2022.575 kb on - strand, within OHPLBJKB_01948 at 2022.575 kb on - strand, within OHPLBJKB_01948 at 2022.575 kb on - strand, within OHPLBJKB_01948 at 2022.581 kb on - strand, within OHPLBJKB_01948 at 2022.584 kb on - strand, within OHPLBJKB_01948 at 2022.677 kb on - strand, within OHPLBJKB_01948 at 2022.824 kb on - strand, within OHPLBJKB_01948 at 2022.824 kb on - strand, within OHPLBJKB_01948 at 2022.824 kb on - strand, within OHPLBJKB_01948 at 2022.842 kb on + strand, within OHPLBJKB_01948 at 2022.843 kb on - strand, within OHPLBJKB_01948 at 2022.843 kb on - strand, within OHPLBJKB_01948 at 2022.843 kb on - strand, within OHPLBJKB_01948 at 2022.844 kb on + strand, within OHPLBJKB_01948 at 2022.844 kb on + strand, within OHPLBJKB_01948 at 2022.844 kb on + strand, within OHPLBJKB_01948 at 2022.844 kb on + strand, within OHPLBJKB_01948 at 2022.845 kb on - strand, within OHPLBJKB_01948 at 2022.865 kb on + strand, within OHPLBJKB_01948 at 2022.865 kb on + strand, within OHPLBJKB_01948 at 2022.866 kb on - strand, within OHPLBJKB_01948 at 2022.877 kb on + strand, within OHPLBJKB_01948 at 2023.010 kb on + strand, within OHPLBJKB_01948 at 2023.038 kb on + strand, within OHPLBJKB_01948 at 2023.038 kb on + strand, within OHPLBJKB_01948 at 2023.039 kb on - strand, within OHPLBJKB_01948 at 2023.229 kb on + strand, within OHPLBJKB_01948 at 2023.229 kb on + strand, within OHPLBJKB_01948 at 2023.250 kb on + strand, within OHPLBJKB_01948 at 2023.250 kb on + strand, within OHPLBJKB_01948 at 2023.324 kb on + strand, within OHPLBJKB_01948 at 2023.520 kb on + strand, within OHPLBJKB_01948 at 2023.521 kb on - strand, within OHPLBJKB_01948 at 2023.604 kb on + strand at 2023.604 kb on + strand at 2023.616 kb on + strand at 2023.616 kb on + strand at 2023.617 kb on - strand at 2023.694 kb on + strand at 2023.695 kb on - strand at 2023.695 kb on - strand at 2023.705 kb on + strand at 2023.708 kb on + strand at 2023.709 kb on - strand at 2023.723 kb on + strand at 2023.724 kb on - strand at 2023.724 kb on - strand at 2023.724 kb on - strand at 2023.724 kb on - strand at 2023.729 kb on - strand at 2023.808 kb on + strand at 2023.808 kb on + strand at 2023.818 kb on + strand at 2023.818 kb on + strand at 2023.818 kb on + strand at 2023.818 kb on + strand at 2023.819 kb on - strand at 2023.833 kb on - strand at 2023.869 kb on - strand at 2023.885 kb on - strand at 2024.012 kb on + strand, within OHPLBJKB_01949 at 2024.013 kb on - strand, within OHPLBJKB_01949 at 2024.062 kb on + strand, within OHPLBJKB_01949 at 2024.216 kb on + strand, within OHPLBJKB_01949 at 2024.225 kb on + strand, within OHPLBJKB_01949 at 2024.270 kb on + strand, within OHPLBJKB_01949 at 2024.271 kb on - strand, within OHPLBJKB_01949 at 2024.307 kb on - strand, within OHPLBJKB_01949 at 2024.322 kb on - strand, within OHPLBJKB_01949 at 2024.342 kb on + strand, within OHPLBJKB_01949 at 2024.400 kb on - strand, within OHPLBJKB_01949 at 2024.431 kb on + strand, within OHPLBJKB_01949 at 2024.431 kb on + strand, within OHPLBJKB_01949 at 2024.525 kb on + strand, within OHPLBJKB_01949 at 2024.579 kb on + strand, within OHPLBJKB_01949 at 2024.579 kb on + strand, within OHPLBJKB_01949 at 2024.598 kb on - strand, within OHPLBJKB_01949
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI10 remove 2,021,447 - OHPLBJKB_01947 0.45 -1.0 2,021,455 + OHPLBJKB_01947 0.45 -1.1 2,021,497 - OHPLBJKB_01947 0.48 -0.1 2,021,595 - OHPLBJKB_01947 0.55 -1.1 2,021,613 + OHPLBJKB_01947 0.56 -0.7 2,021,868 + OHPLBJKB_01947 0.73 +1.4 2,022,039 - OHPLBJKB_01947 0.85 +0.8 2,022,064 + OHPLBJKB_01947 0.86 -0.3 2,022,247 - -0.8 2,022,337 + +0.4 2,022,337 + +1.4 2,022,347 - +1.4 2,022,350 - +1.0 2,022,513 - -0.9 2,022,574 + OHPLBJKB_01948 0.13 -1.7 2,022,574 + OHPLBJKB_01948 0.13 +0.1 2,022,574 + OHPLBJKB_01948 0.13 +1.7 2,022,575 - OHPLBJKB_01948 0.13 +0.6 2,022,575 - OHPLBJKB_01948 0.13 +0.2 2,022,575 - OHPLBJKB_01948 0.13 +0.1 2,022,575 - OHPLBJKB_01948 0.13 +0.3 2,022,581 - OHPLBJKB_01948 0.13 +0.1 2,022,584 - OHPLBJKB_01948 0.13 +0.6 2,022,677 - OHPLBJKB_01948 0.21 +0.6 2,022,824 - OHPLBJKB_01948 0.32 -0.3 2,022,824 - OHPLBJKB_01948 0.32 +2.8 2,022,824 - OHPLBJKB_01948 0.32 +0.8 2,022,842 + OHPLBJKB_01948 0.34 +0.1 2,022,843 - OHPLBJKB_01948 0.34 -0.3 2,022,843 - OHPLBJKB_01948 0.34 +0.4 2,022,843 - OHPLBJKB_01948 0.34 +1.8 2,022,844 + OHPLBJKB_01948 0.34 +0.9 2,022,844 + OHPLBJKB_01948 0.34 -2.1 2,022,844 + OHPLBJKB_01948 0.34 -0.2 2,022,844 + OHPLBJKB_01948 0.34 -0.7 2,022,845 - OHPLBJKB_01948 0.34 +0.7 2,022,865 + OHPLBJKB_01948 0.35 -0.1 2,022,865 + OHPLBJKB_01948 0.35 -1.6 2,022,866 - OHPLBJKB_01948 0.35 -1.8 2,022,877 + OHPLBJKB_01948 0.36 -1.2 2,023,010 + OHPLBJKB_01948 0.47 -0.4 2,023,038 + OHPLBJKB_01948 0.49 +0.5 2,023,038 + OHPLBJKB_01948 0.49 +1.1 2,023,039 - OHPLBJKB_01948 0.49 -0.4 2,023,229 + OHPLBJKB_01948 0.64 -0.8 2,023,229 + OHPLBJKB_01948 0.64 -0.9 2,023,250 + OHPLBJKB_01948 0.65 +1.6 2,023,250 + OHPLBJKB_01948 0.65 +1.5 2,023,324 + OHPLBJKB_01948 0.71 +0.3 2,023,520 + OHPLBJKB_01948 0.86 +0.2 2,023,521 - OHPLBJKB_01948 0.86 -0.9 2,023,604 + -0.6 2,023,604 + -0.8 2,023,616 + +0.4 2,023,616 + +1.7 2,023,617 - -0.3 2,023,694 + -1.9 2,023,695 - -0.2 2,023,695 - +0.9 2,023,705 + -1.7 2,023,708 + -0.2 2,023,709 - +0.7 2,023,723 + +1.0 2,023,724 - -0.2 2,023,724 - +2.7 2,023,724 - +0.5 2,023,724 - -1.2 2,023,729 - -1.9 2,023,808 + +1.3 2,023,808 + -1.3 2,023,818 + +0.3 2,023,818 + -0.6 2,023,818 + -0.5 2,023,818 + -0.5 2,023,819 - +0.6 2,023,833 - +0.1 2,023,869 - -0.1 2,023,885 - +0.1 2,024,012 + OHPLBJKB_01949 0.11 -1.2 2,024,013 - OHPLBJKB_01949 0.11 -1.0 2,024,062 + OHPLBJKB_01949 0.13 -0.9 2,024,216 + OHPLBJKB_01949 0.21 -1.9 2,024,225 + OHPLBJKB_01949 0.22 +0.3 2,024,270 + OHPLBJKB_01949 0.24 +1.4 2,024,271 - OHPLBJKB_01949 0.24 -0.7 2,024,307 - OHPLBJKB_01949 0.26 -0.8 2,024,322 - OHPLBJKB_01949 0.27 +0.6 2,024,342 + OHPLBJKB_01949 0.28 -1.2 2,024,400 - OHPLBJKB_01949 0.31 +0.4 2,024,431 + OHPLBJKB_01949 0.32 +1.1 2,024,431 + OHPLBJKB_01949 0.32 -0.4 2,024,525 + OHPLBJKB_01949 0.37 +0.1 2,024,579 + OHPLBJKB_01949 0.40 -0.7 2,024,579 + OHPLBJKB_01949 0.40 -1.5 2,024,598 - OHPLBJKB_01949 0.41 +0.7
Or see this region's nucleotide sequence