Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00274

Experiment: bur MOI10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00273 and OHPLBJKB_00274 are separated by 127 nucleotidesOHPLBJKB_00274 and OHPLBJKB_00275 are separated by 10 nucleotides OHPLBJKB_00273: OHPLBJKB_00273 - Maltodextrin phosphorylase, at 297,283 to 299,730 _00273 OHPLBJKB_00274: OHPLBJKB_00274 - hypothetical protein, at 299,858 to 300,196 _00274 OHPLBJKB_00275: OHPLBJKB_00275 - hypothetical protein, at 300,207 to 301,277 _00275 Position (kb) 299 300 301Strain fitness (log2 ratio) -2 -1 0 1 2at 298.870 kb on + strand, within OHPLBJKB_00273at 298.870 kb on + strand, within OHPLBJKB_00273at 298.870 kb on + strand, within OHPLBJKB_00273at 298.870 kb on + strand, within OHPLBJKB_00273at 298.870 kb on + strand, within OHPLBJKB_00273at 298.871 kb on - strand, within OHPLBJKB_00273at 298.871 kb on - strand, within OHPLBJKB_00273at 298.871 kb on - strand, within OHPLBJKB_00273at 298.871 kb on - strand, within OHPLBJKB_00273at 298.871 kb on - strand, within OHPLBJKB_00273at 298.871 kb on - strand, within OHPLBJKB_00273at 298.922 kb on + strand, within OHPLBJKB_00273at 298.922 kb on + strand, within OHPLBJKB_00273at 298.923 kb on - strand, within OHPLBJKB_00273at 298.935 kb on + strand, within OHPLBJKB_00273at 298.936 kb on - strand, within OHPLBJKB_00273at 298.936 kb on - strand, within OHPLBJKB_00273at 298.945 kb on + strand, within OHPLBJKB_00273at 298.945 kb on + strand, within OHPLBJKB_00273at 298.945 kb on + strand, within OHPLBJKB_00273at 298.946 kb on - strand, within OHPLBJKB_00273at 298.987 kb on + strand, within OHPLBJKB_00273at 298.987 kb on + strand, within OHPLBJKB_00273at 299.066 kb on - strand, within OHPLBJKB_00273at 299.066 kb on - strand, within OHPLBJKB_00273at 299.068 kb on + strand, within OHPLBJKB_00273at 299.068 kb on + strand, within OHPLBJKB_00273at 299.068 kb on + strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.069 kb on - strand, within OHPLBJKB_00273at 299.170 kb on + strand, within OHPLBJKB_00273at 299.171 kb on - strand, within OHPLBJKB_00273at 299.259 kb on + strand, within OHPLBJKB_00273at 299.298 kb on + strand, within OHPLBJKB_00273at 299.299 kb on - strand, within OHPLBJKB_00273at 299.349 kb on + strand, within OHPLBJKB_00273at 299.349 kb on + strand, within OHPLBJKB_00273at 299.350 kb on - strand, within OHPLBJKB_00273at 299.350 kb on - strand, within OHPLBJKB_00273at 299.350 kb on - strand, within OHPLBJKB_00273at 299.355 kb on + strand, within OHPLBJKB_00273at 299.419 kb on + strand, within OHPLBJKB_00273at 299.419 kb on + strand, within OHPLBJKB_00273at 299.420 kb on - strand, within OHPLBJKB_00273at 299.422 kb on + strand, within OHPLBJKB_00273at 299.423 kb on - strand, within OHPLBJKB_00273at 299.549 kb on + strandat 299.569 kb on + strandat 299.569 kb on + strandat 299.569 kb on + strandat 299.569 kb on + strandat 299.569 kb on + strandat 299.570 kb on - strandat 299.603 kb on - strandat 299.677 kb on - strandat 299.689 kb on + strandat 299.710 kb on - strandat 299.740 kb on + strandat 299.740 kb on + strandat 299.744 kb on + strandat 299.744 kb on + strandat 299.823 kb on + strandat 299.825 kb on + strandat 299.825 kb on + strandat 299.986 kb on + strand, within OHPLBJKB_00274at 299.986 kb on + strand, within OHPLBJKB_00274at 299.987 kb on - strand, within OHPLBJKB_00274at 300.051 kb on + strand, within OHPLBJKB_00274at 300.150 kb on + strand, within OHPLBJKB_00274at 300.185 kb on - strandat 300.199 kb on - strandat 300.216 kb on - strandat 300.311 kb on - strandat 300.364 kb on + strand, within OHPLBJKB_00275at 300.365 kb on - strand, within OHPLBJKB_00275at 300.368 kb on + strand, within OHPLBJKB_00275at 300.369 kb on - strand, within OHPLBJKB_00275at 300.404 kb on + strand, within OHPLBJKB_00275at 300.554 kb on - strand, within OHPLBJKB_00275at 300.560 kb on - strand, within OHPLBJKB_00275at 300.618 kb on + strand, within OHPLBJKB_00275at 300.620 kb on + strand, within OHPLBJKB_00275at 300.717 kb on + strand, within OHPLBJKB_00275at 301.007 kb on + strand, within OHPLBJKB_00275at 301.007 kb on + strand, within OHPLBJKB_00275at 301.007 kb on + strand, within OHPLBJKB_00275at 301.021 kb on + strand, within OHPLBJKB_00275at 301.097 kb on + strand, within OHPLBJKB_00275at 301.098 kb on - strand, within OHPLBJKB_00275at 301.098 kb on - strand, within OHPLBJKB_00275at 301.137 kb on + strand, within OHPLBJKB_00275

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI10
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298,870 + OHPLBJKB_00273 0.65 +0.4
298,870 + OHPLBJKB_00273 0.65 +0.2
298,870 + OHPLBJKB_00273 0.65 +0.3
298,870 + OHPLBJKB_00273 0.65 -0.4
298,870 + OHPLBJKB_00273 0.65 -1.0
298,871 - OHPLBJKB_00273 0.65 +0.5
298,871 - OHPLBJKB_00273 0.65 +0.7
298,871 - OHPLBJKB_00273 0.65 +0.2
298,871 - OHPLBJKB_00273 0.65 +0.4
298,871 - OHPLBJKB_00273 0.65 -0.3
298,871 - OHPLBJKB_00273 0.65 +0.4
298,922 + OHPLBJKB_00273 0.67 -0.7
298,922 + OHPLBJKB_00273 0.67 -0.1
298,923 - OHPLBJKB_00273 0.67 -0.6
298,935 + OHPLBJKB_00273 0.67 -0.5
298,936 - OHPLBJKB_00273 0.68 -0.9
298,936 - OHPLBJKB_00273 0.68 +0.2
298,945 + OHPLBJKB_00273 0.68 +0.3
298,945 + OHPLBJKB_00273 0.68 -1.3
298,945 + OHPLBJKB_00273 0.68 -0.9
298,946 - OHPLBJKB_00273 0.68 -0.6
298,987 + OHPLBJKB_00273 0.70 +0.1
298,987 + OHPLBJKB_00273 0.70 -0.8
299,066 - OHPLBJKB_00273 0.73 -0.8
299,066 - OHPLBJKB_00273 0.73 -1.3
299,068 + OHPLBJKB_00273 0.73 -0.5
299,068 + OHPLBJKB_00273 0.73 -1.9
299,068 + OHPLBJKB_00273 0.73 +0.6
299,069 - OHPLBJKB_00273 0.73 +0.2
299,069 - OHPLBJKB_00273 0.73 -0.4
299,069 - OHPLBJKB_00273 0.73 -0.3
299,069 - OHPLBJKB_00273 0.73 -1.0
299,069 - OHPLBJKB_00273 0.73 -0.3
299,069 - OHPLBJKB_00273 0.73 +0.1
299,069 - OHPLBJKB_00273 0.73 -0.7
299,170 + OHPLBJKB_00273 0.77 -1.4
299,171 - OHPLBJKB_00273 0.77 +1.3
299,259 + OHPLBJKB_00273 0.81 -0.5
299,298 + OHPLBJKB_00273 0.82 -0.3
299,299 - OHPLBJKB_00273 0.82 +1.3
299,349 + OHPLBJKB_00273 0.84 -1.4
299,349 + OHPLBJKB_00273 0.84 -1.3
299,350 - OHPLBJKB_00273 0.84 -0.5
299,350 - OHPLBJKB_00273 0.84 +0.4
299,350 - OHPLBJKB_00273 0.84 +0.0
299,355 + OHPLBJKB_00273 0.85 -0.9
299,419 + OHPLBJKB_00273 0.87 +1.6
299,419 + OHPLBJKB_00273 0.87 +0.1
299,420 - OHPLBJKB_00273 0.87 +0.9
299,422 + OHPLBJKB_00273 0.87 +0.6
299,423 - OHPLBJKB_00273 0.87 -2.2
299,549 + -1.0
299,569 + +0.8
299,569 + +0.9
299,569 + +1.2
299,569 + -1.5
299,569 + +1.5
299,570 - -1.3
299,603 - -1.2
299,677 - +1.4
299,689 + -0.7
299,710 - +0.2
299,740 + +1.1
299,740 + +0.2
299,744 + +0.4
299,744 + -0.4
299,823 + -1.8
299,825 + -0.9
299,825 + -1.1
299,986 + OHPLBJKB_00274 0.38 +2.0
299,986 + OHPLBJKB_00274 0.38 -1.2
299,987 - OHPLBJKB_00274 0.38 +0.2
300,051 + OHPLBJKB_00274 0.57 +0.5
300,150 + OHPLBJKB_00274 0.86 -0.0
300,185 - +0.5
300,199 - +0.1
300,216 - -0.3
300,311 - +0.7
300,364 + OHPLBJKB_00275 0.15 +1.0
300,365 - OHPLBJKB_00275 0.15 +0.4
300,368 + OHPLBJKB_00275 0.15 +1.3
300,369 - OHPLBJKB_00275 0.15 -2.2
300,404 + OHPLBJKB_00275 0.18 -0.7
300,554 - OHPLBJKB_00275 0.32 +1.2
300,560 - OHPLBJKB_00275 0.33 -0.6
300,618 + OHPLBJKB_00275 0.38 -1.7
300,620 + OHPLBJKB_00275 0.39 +0.0
300,717 + OHPLBJKB_00275 0.48 -0.4
301,007 + OHPLBJKB_00275 0.75 +0.7
301,007 + OHPLBJKB_00275 0.75 +0.1
301,007 + OHPLBJKB_00275 0.75 +2.1
301,021 + OHPLBJKB_00275 0.76 +0.3
301,097 + OHPLBJKB_00275 0.83 -0.0
301,098 - OHPLBJKB_00275 0.83 +0.2
301,098 - OHPLBJKB_00275 0.83 -0.1
301,137 + OHPLBJKB_00275 0.87 -0.8

Or see this region's nucleotide sequence