Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03631

Experiment: Wheat Arabinoxylan; filtered 1 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03630 and BACOVA_03631 are separated by 188 nucleotidesBACOVA_03631 and BACOVA_03632 are separated by 18 nucleotides BACOVA_03630: BACOVA_03630 - response regulator receiver domain protein, at 439,678 to 443,718 _03630 BACOVA_03631: BACOVA_03631 - hypothetical protein, at 443,907 to 445,088 _03631 BACOVA_03632: BACOVA_03632 - hypothetical protein, at 445,107 to 446,354 _03632 Position (kb) 443 444 445 446Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 442.911 kb on + strand, within BACOVA_03630at 442.947 kb on + strand, within BACOVA_03630at 442.948 kb on - strand, within BACOVA_03630at 442.982 kb on + strand, within BACOVA_03630at 443.085 kb on + strand, within BACOVA_03630at 443.086 kb on - strand, within BACOVA_03630at 443.163 kb on + strand, within BACOVA_03630at 443.163 kb on + strand, within BACOVA_03630at 443.163 kb on + strand, within BACOVA_03630at 443.164 kb on - strand, within BACOVA_03630at 443.170 kb on - strand, within BACOVA_03630at 443.173 kb on - strand, within BACOVA_03630at 443.240 kb on - strand, within BACOVA_03630at 443.257 kb on - strand, within BACOVA_03630at 443.267 kb on - strand, within BACOVA_03630at 443.421 kb on + strandat 443.422 kb on - strandat 443.422 kb on - strandat 443.427 kb on - strandat 443.427 kb on - strandat 443.453 kb on - strandat 443.521 kb on - strandat 443.559 kb on - strandat 443.754 kb on - strandat 443.766 kb on + strandat 443.766 kb on + strandat 443.921 kb on + strandat 443.921 kb on + strandat 443.982 kb on - strandat 444.044 kb on - strand, within BACOVA_03631at 444.044 kb on - strand, within BACOVA_03631at 444.046 kb on + strand, within BACOVA_03631at 444.047 kb on - strand, within BACOVA_03631at 444.047 kb on - strand, within BACOVA_03631at 444.072 kb on - strand, within BACOVA_03631at 444.093 kb on + strand, within BACOVA_03631at 444.143 kb on + strand, within BACOVA_03631at 444.146 kb on + strand, within BACOVA_03631at 444.146 kb on + strand, within BACOVA_03631at 444.147 kb on - strand, within BACOVA_03631at 444.147 kb on - strand, within BACOVA_03631at 444.158 kb on + strand, within BACOVA_03631at 444.159 kb on - strand, within BACOVA_03631at 444.159 kb on - strand, within BACOVA_03631at 444.211 kb on + strand, within BACOVA_03631at 444.212 kb on - strand, within BACOVA_03631at 444.212 kb on - strand, within BACOVA_03631at 444.212 kb on - strand, within BACOVA_03631at 444.214 kb on + strand, within BACOVA_03631at 444.215 kb on - strand, within BACOVA_03631at 444.220 kb on + strand, within BACOVA_03631at 444.389 kb on + strand, within BACOVA_03631at 444.426 kb on - strand, within BACOVA_03631at 444.471 kb on - strand, within BACOVA_03631at 444.485 kb on + strand, within BACOVA_03631at 444.485 kb on + strand, within BACOVA_03631at 444.485 kb on + strand, within BACOVA_03631at 444.486 kb on - strand, within BACOVA_03631at 444.495 kb on - strand, within BACOVA_03631at 444.528 kb on - strand, within BACOVA_03631at 444.581 kb on + strand, within BACOVA_03631at 444.582 kb on - strand, within BACOVA_03631at 444.584 kb on - strand, within BACOVA_03631at 444.593 kb on - strand, within BACOVA_03631at 444.594 kb on + strand, within BACOVA_03631at 444.595 kb on - strand, within BACOVA_03631at 444.629 kb on + strand, within BACOVA_03631at 444.629 kb on + strand, within BACOVA_03631at 444.630 kb on - strand, within BACOVA_03631at 444.636 kb on + strand, within BACOVA_03631at 444.636 kb on + strand, within BACOVA_03631at 444.638 kb on + strand, within BACOVA_03631at 444.640 kb on + strand, within BACOVA_03631at 444.640 kb on + strand, within BACOVA_03631at 444.640 kb on + strand, within BACOVA_03631at 444.725 kb on - strand, within BACOVA_03631at 444.783 kb on + strand, within BACOVA_03631at 444.839 kb on + strand, within BACOVA_03631at 444.848 kb on + strand, within BACOVA_03631at 444.849 kb on - strand, within BACOVA_03631at 444.849 kb on - strand, within BACOVA_03631at 445.001 kb on + strandat 445.047 kb on - strandat 445.087 kb on - strandat 445.100 kb on + strandat 445.104 kb on - strandat 445.349 kb on + strand, within BACOVA_03632at 445.354 kb on + strand, within BACOVA_03632at 445.369 kb on + strand, within BACOVA_03632at 445.397 kb on + strand, within BACOVA_03632at 445.481 kb on - strand, within BACOVA_03632at 445.484 kb on + strand, within BACOVA_03632at 445.543 kb on - strand, within BACOVA_03632at 445.565 kb on + strand, within BACOVA_03632at 445.565 kb on + strand, within BACOVA_03632at 445.565 kb on + strand, within BACOVA_03632at 445.566 kb on - strand, within BACOVA_03632at 445.596 kb on - strand, within BACOVA_03632at 445.759 kb on + strand, within BACOVA_03632at 445.760 kb on - strand, within BACOVA_03632at 445.763 kb on + strand, within BACOVA_03632at 445.763 kb on + strand, within BACOVA_03632at 445.764 kb on - strand, within BACOVA_03632at 445.764 kb on - strand, within BACOVA_03632at 445.764 kb on - strand, within BACOVA_03632at 445.769 kb on + strand, within BACOVA_03632at 445.774 kb on + strand, within BACOVA_03632at 445.775 kb on - strand, within BACOVA_03632at 445.775 kb on - strand, within BACOVA_03632at 445.797 kb on + strand, within BACOVA_03632at 445.798 kb on - strand, within BACOVA_03632at 445.798 kb on - strand, within BACOVA_03632at 445.829 kb on + strand, within BACOVA_03632at 445.847 kb on + strand, within BACOVA_03632at 445.847 kb on + strand, within BACOVA_03632at 445.848 kb on - strand, within BACOVA_03632at 445.848 kb on - strand, within BACOVA_03632at 445.934 kb on - strand, within BACOVA_03632at 445.942 kb on - strand, within BACOVA_03632at 446.010 kb on + strand, within BACOVA_03632at 446.011 kb on - strand, within BACOVA_03632at 446.011 kb on - strand, within BACOVA_03632at 446.011 kb on - strand, within BACOVA_03632at 446.069 kb on + strand, within BACOVA_03632

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Per-strain Table

Position Strand Gene LocusTag Fraction Wheat Arabinoxylan; filtered 1 mg/mL (C)
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442,911 + BACOVA_03630 0.80 +0.3
442,947 + BACOVA_03630 0.81 +0.1
442,948 - BACOVA_03630 0.81 -0.9
442,982 + BACOVA_03630 0.82 +1.9
443,085 + BACOVA_03630 0.84 +0.3
443,086 - BACOVA_03630 0.84 -0.4
443,163 + BACOVA_03630 0.86 +0.2
443,163 + BACOVA_03630 0.86 -1.0
443,163 + BACOVA_03630 0.86 -0.3
443,164 - BACOVA_03630 0.86 -1.9
443,170 - BACOVA_03630 0.86 -2.1
443,173 - BACOVA_03630 0.86 -2.6
443,240 - BACOVA_03630 0.88 -0.9
443,257 - BACOVA_03630 0.89 -1.7
443,267 - BACOVA_03630 0.89 -1.1
443,421 + -0.3
443,422 - -2.3
443,422 - -0.7
443,427 - -0.8
443,427 - -1.6
443,453 - +0.2
443,521 - +0.9
443,559 - -2.0
443,754 - -1.3
443,766 + +1.5
443,766 + +0.6
443,921 + -0.3
443,921 + +2.3
443,982 - -0.9
444,044 - BACOVA_03631 0.12 -0.5
444,044 - BACOVA_03631 0.12 -2.3
444,046 + BACOVA_03631 0.12 +0.4
444,047 - BACOVA_03631 0.12 -2.3
444,047 - BACOVA_03631 0.12 -1.3
444,072 - BACOVA_03631 0.14 -0.6
444,093 + BACOVA_03631 0.16 -1.1
444,143 + BACOVA_03631 0.20 -0.3
444,146 + BACOVA_03631 0.20 +1.4
444,146 + BACOVA_03631 0.20 +0.0
444,147 - BACOVA_03631 0.20 -0.8
444,147 - BACOVA_03631 0.20 -1.3
444,158 + BACOVA_03631 0.21 +0.6
444,159 - BACOVA_03631 0.21 -0.5
444,159 - BACOVA_03631 0.21 -1.6
444,211 + BACOVA_03631 0.26 +0.8
444,212 - BACOVA_03631 0.26 -2.6
444,212 - BACOVA_03631 0.26 -0.4
444,212 - BACOVA_03631 0.26 -2.5
444,214 + BACOVA_03631 0.26 +0.3
444,215 - BACOVA_03631 0.26 -1.8
444,220 + BACOVA_03631 0.26 +0.4
444,389 + BACOVA_03631 0.41 +0.3
444,426 - BACOVA_03631 0.44 -1.5
444,471 - BACOVA_03631 0.48 -1.8
444,485 + BACOVA_03631 0.49 +0.8
444,485 + BACOVA_03631 0.49 +3.1
444,485 + BACOVA_03631 0.49 -1.0
444,486 - BACOVA_03631 0.49 -0.7
444,495 - BACOVA_03631 0.50 -1.4
444,528 - BACOVA_03631 0.53 -1.1
444,581 + BACOVA_03631 0.57 +0.7
444,582 - BACOVA_03631 0.57 -1.2
444,584 - BACOVA_03631 0.57 -1.1
444,593 - BACOVA_03631 0.58 +0.2
444,594 + BACOVA_03631 0.58 +1.1
444,595 - BACOVA_03631 0.58 -1.4
444,629 + BACOVA_03631 0.61 -1.7
444,629 + BACOVA_03631 0.61 +0.5
444,630 - BACOVA_03631 0.61 -0.4
444,636 + BACOVA_03631 0.62 +1.5
444,636 + BACOVA_03631 0.62 +0.0
444,638 + BACOVA_03631 0.62 +0.3
444,640 + BACOVA_03631 0.62 +0.2
444,640 + BACOVA_03631 0.62 -1.7
444,640 + BACOVA_03631 0.62 +0.3
444,725 - BACOVA_03631 0.69 -1.6
444,783 + BACOVA_03631 0.74 -0.4
444,839 + BACOVA_03631 0.79 -0.5
444,848 + BACOVA_03631 0.80 +1.3
444,849 - BACOVA_03631 0.80 -1.1
444,849 - BACOVA_03631 0.80 -0.6
445,001 + +1.1
445,047 - +0.3
445,087 - -1.3
445,100 + +1.6
445,104 - -1.0
445,349 + BACOVA_03632 0.19 -0.1
445,354 + BACOVA_03632 0.20 -1.1
445,369 + BACOVA_03632 0.21 -0.7
445,397 + BACOVA_03632 0.23 -2.0
445,481 - BACOVA_03632 0.30 -0.7
445,484 + BACOVA_03632 0.30 -1.4
445,543 - BACOVA_03632 0.35 -1.2
445,565 + BACOVA_03632 0.37 -0.7
445,565 + BACOVA_03632 0.37 -1.4
445,565 + BACOVA_03632 0.37 -0.7
445,566 - BACOVA_03632 0.37 -1.5
445,596 - BACOVA_03632 0.39 -1.5
445,759 + BACOVA_03632 0.52 +0.6
445,760 - BACOVA_03632 0.52 -1.3
445,763 + BACOVA_03632 0.53 +0.8
445,763 + BACOVA_03632 0.53 +0.3
445,764 - BACOVA_03632 0.53 -0.0
445,764 - BACOVA_03632 0.53 -0.5
445,764 - BACOVA_03632 0.53 -0.1
445,769 + BACOVA_03632 0.53 +0.0
445,774 + BACOVA_03632 0.53 +0.6
445,775 - BACOVA_03632 0.54 -1.6
445,775 - BACOVA_03632 0.54 -1.2
445,797 + BACOVA_03632 0.55 -0.7
445,798 - BACOVA_03632 0.55 -1.9
445,798 - BACOVA_03632 0.55 -2.1
445,829 + BACOVA_03632 0.58 -2.7
445,847 + BACOVA_03632 0.59 -0.7
445,847 + BACOVA_03632 0.59 +0.5
445,848 - BACOVA_03632 0.59 -3.1
445,848 - BACOVA_03632 0.59 -1.2
445,934 - BACOVA_03632 0.66 -0.2
445,942 - BACOVA_03632 0.67 -1.0
446,010 + BACOVA_03632 0.72 -0.6
446,011 - BACOVA_03632 0.72 +1.7
446,011 - BACOVA_03632 0.72 -1.3
446,011 - BACOVA_03632 0.72 -0.3
446,069 + BACOVA_03632 0.77 -1.9

Or see this region's nucleotide sequence