Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00034
Experiment: Wheat Arabinoxylan; filtered 1 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Wheat Arabinoxylan; filtered 1 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
177,918 | + | BACOVA_00132 | 0.60 | -1.1 | |
177,918 | + | BACOVA_00132 | 0.60 | -0.6 | |
177,919 | - | BACOVA_00132 | 0.60 | +0.1 | |
177,919 | - | BACOVA_00132 | 0.60 | +1.1 | |
177,923 | - | BACOVA_00132 | 0.61 | -0.4 | |
177,938 | + | BACOVA_00132 | 0.64 | +1.4 | |
177,939 | - | BACOVA_00132 | 0.65 | -0.4 | |
178,047 | - | BACOVA_00132 | 0.89 | +0.2 | |
178,047 | - | BACOVA_00132 | 0.89 | -2.0 | |
178,047 | - | BACOVA_00132 | 0.89 | -0.0 | |
178,071 | - | -0.3 | |||
178,097 | - | -0.7 | |||
178,124 | - | +0.1 | |||
178,155 | - | -1.6 | |||
178,156 | + | -1.1 | |||
178,157 | - | -0.9 | |||
178,157 | - | -0.9 | |||
178,157 | - | -0.3 | |||
178,189 | - | +0.2 | |||
178,195 | + | +0.9 | |||
178,205 | - | +0.2 | |||
178,223 | - | +0.2 | |||
178,250 | - | +0.1 | |||
178,280 | + | -0.7 | |||
178,280 | + | +0.1 | |||
178,281 | - | -0.5 | |||
178,281 | - | +0.1 | |||
178,315 | - | +0.7 |
Or see this region's nucleotide sequence