Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03658

Experiment: hib MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	hib MOI1
3,838,719	+				-0.8
3,838,719	+				-2.6
3,838,732	-				-1.1
3,838,743	-				-0.6
3,838,775	-				-0.4
3,838,803	+				-0.0
3,838,803	+				-0.2
3,838,803	+				+1.6
3,838,803	+				-0.5
3,838,803	+				-2.8
3,838,804	-				-1.7
3,838,804	-				-1.0
3,838,804	-				-1.2
3,838,856	+		OHPLBJKB_03657	0.14	+1.1
3,838,857	-		OHPLBJKB_03657	0.14	-1.2
3,838,857	-		OHPLBJKB_03657	0.14	+1.3
3,838,857	-		OHPLBJKB_03657	0.14	-0.1
3,839,122	+		OHPLBJKB_03657	0.42	-0.0
3,839,213	-		OHPLBJKB_03657	0.52	+0.5
3,839,213	-		OHPLBJKB_03657	0.52	+0.9
3,839,244	+		OHPLBJKB_03657	0.55	+0.3
3,839,376	-		OHPLBJKB_03657	0.69	+0.4
3,839,395	+		OHPLBJKB_03657	0.71	+0.5
3,839,466	+		OHPLBJKB_03657	0.79	-0.6
3,839,467	-		OHPLBJKB_03657	0.79	+0.2
3,839,467	-		OHPLBJKB_03657	0.79	-1.8
3,839,558	+		OHPLBJKB_03657	0.89	-2.1
3,839,558	+		OHPLBJKB_03657	0.89	-0.9
3,839,559	+		OHPLBJKB_03657	0.89	-0.9
3,839,559	-		OHPLBJKB_03657	0.89	+2.1
3,839,559	-		OHPLBJKB_03657	0.89	+0.7
3,839,559	-		OHPLBJKB_03657	0.89	-0.9
3,839,559	-		OHPLBJKB_03657	0.89	+0.4
3,839,559	-		OHPLBJKB_03657	0.89	-2.0
3,839,559	-		OHPLBJKB_03657	0.89	-0.2
3,839,626	+				-2.3
3,839,650	-				+0.8
3,839,674	-				-0.8
3,839,674	-				-0.2
3,839,690	+				-1.1
3,839,691	-				-0.2
3,839,694	+				-2.9
3,839,695	-				+0.9
3,839,724	-				+0.6
3,839,773	+				-0.0
3,839,773	+				-2.2
3,839,774	-				+0.4
3,839,777	-				-1.4
3,839,777	-				-1.1
3,839,785	+				+1.2
3,839,786	-				-0.2
3,839,786	-				-0.3
3,839,835	-				-0.1
3,839,883	-				-1.0
3,839,893	+				-2.0
3,839,894	-				-1.1
3,839,973	-		OHPLBJKB_03658	0.13	-0.0
3,840,098	+		OHPLBJKB_03658	0.18	+0.7
3,840,131	+		OHPLBJKB_03658	0.19	+1.2
3,840,132	-		OHPLBJKB_03658	0.19	-0.5
3,840,187	-		OHPLBJKB_03658	0.21	+0.6
3,840,200	+		OHPLBJKB_03658	0.22	-1.9
3,840,200	+		OHPLBJKB_03658	0.22	-2.0
3,840,200	+		OHPLBJKB_03658	0.22	+0.8
3,840,200	+		OHPLBJKB_03658	0.22	-0.6
3,840,202	+		OHPLBJKB_03658	0.22	+1.5
3,840,202	+		OHPLBJKB_03658	0.22	+0.4
3,840,202	+		OHPLBJKB_03658	0.22	+1.3
3,840,203	-		OHPLBJKB_03658	0.22	+0.2
3,840,203	-		OHPLBJKB_03658	0.22	+1.4
3,840,203	-		OHPLBJKB_03658	0.22	-2.2
3,840,203	-		OHPLBJKB_03658	0.22	-0.5
3,840,203	-		OHPLBJKB_03658	0.22	+0.8
3,840,323	+		OHPLBJKB_03658	0.27	-0.1
3,840,323	+		OHPLBJKB_03658	0.27	+1.2
3,840,361	+		OHPLBJKB_03658	0.28	+1.8
3,840,362	-		OHPLBJKB_03658	0.28	-1.8
3,840,362	-		OHPLBJKB_03658	0.28	-1.3
3,840,364	+		OHPLBJKB_03658	0.28	+0.6
3,840,365	-		OHPLBJKB_03658	0.28	+0.8
3,840,436	+		OHPLBJKB_03658	0.31	+1.1
3,840,437	-		OHPLBJKB_03658	0.31	+0.6
3,840,437	-		OHPLBJKB_03658	0.31	-0.8
3,840,516	+		OHPLBJKB_03658	0.35	+0.3
3,840,516	+		OHPLBJKB_03658	0.35	-2.9
3,840,580	-		OHPLBJKB_03658	0.37	+1.0
3,840,580	-		OHPLBJKB_03658	0.37	+0.1
3,840,633	+		OHPLBJKB_03658	0.39	-0.1
3,840,633	+		OHPLBJKB_03658	0.39	-1.1
3,840,633	+		OHPLBJKB_03658	0.39	+0.4
3,840,633	+		OHPLBJKB_03658	0.39	+1.5
3,840,634	-		OHPLBJKB_03658	0.39	-0.6
3,840,634	-		OHPLBJKB_03658	0.39	-0.9
3,840,641	+		OHPLBJKB_03658	0.40	+1.2
3,840,641	+		OHPLBJKB_03658	0.40	-0.0
3,840,647	+		OHPLBJKB_03658	0.40	+1.1
3,840,765	-		OHPLBJKB_03658	0.45	+1.1
3,840,794	+		OHPLBJKB_03658	0.46	-0.6
3,840,794	+		OHPLBJKB_03658	0.46	+0.1
3,840,795	-		OHPLBJKB_03658	0.46	+0.6
3,840,795	-		OHPLBJKB_03658	0.46	-0.8
3,840,799	-		OHPLBJKB_03658	0.46	-0.6
3,840,921	+		OHPLBJKB_03658	0.51	+1.7
3,840,933	-		OHPLBJKB_03658	0.52	-1.2
3,840,991	+		OHPLBJKB_03658	0.54	-2.6
3,840,992	-		OHPLBJKB_03658	0.54	+1.0
3,841,060	+		OHPLBJKB_03658	0.57	-0.1
3,841,080	-		OHPLBJKB_03658	0.57	-0.8
3,841,216	-		OHPLBJKB_03658	0.63	+1.1
3,841,251	-		OHPLBJKB_03658	0.64	-0.0
3,841,352	-		OHPLBJKB_03658	0.69	+0.1
3,841,352	-		OHPLBJKB_03658	0.69	+0.9
3,841,376	-		OHPLBJKB_03658	0.70	-1.4
3,841,427	+		OHPLBJKB_03658	0.72	-1.9
3,841,427	+		OHPLBJKB_03658	0.72	+1.6
3,841,428	-		OHPLBJKB_03658	0.72	-0.5
3,841,428	-		OHPLBJKB_03658	0.72	-1.7
3,841,429	+		OHPLBJKB_03658	0.72	+0.8
3,841,429	+		OHPLBJKB_03658	0.72	+1.3
3,841,429	+		OHPLBJKB_03658	0.72	-2.9
3,841,430	-		OHPLBJKB_03658	0.72	+1.2
3,841,430	-		OHPLBJKB_03658	0.72	+1.5
3,841,430	-		OHPLBJKB_03658	0.72	+2.2
3,841,525	-		OHPLBJKB_03658	0.76	+0.5
3,841,592	+		OHPLBJKB_03658	0.78	+1.2
3,841,608	-		OHPLBJKB_03658	0.79	+0.1
3,841,648	+		OHPLBJKB_03658	0.81	-0.2
3,841,713	+		OHPLBJKB_03658	0.83	-0.7
3,841,713	+		OHPLBJKB_03658	0.83	+0.4
3,841,802	+		OHPLBJKB_03658	0.87	+1.0
3,841,802	+		OHPLBJKB_03658	0.87	-0.9
3,841,802	+		OHPLBJKB_03658	0.87	-0.2
3,841,802	+		OHPLBJKB_03658	0.87	-0.7
3,841,802	+		OHPLBJKB_03658	0.87	+1.6
3,841,802	+		OHPLBJKB_03658	0.87	-0.0
3,841,803	-		OHPLBJKB_03658	0.87	-1.0
3,841,803	-		OHPLBJKB_03658	0.87	+1.2
3,841,803	-		OHPLBJKB_03658	0.87	-3.2
3,841,803	-		OHPLBJKB_03658	0.87	-0.3
3,841,937	+				+0.7
3,842,133	+				-0.6
3,842,134	-				+1.4
3,842,284	-				-1.1
3,842,312	+				-1.7
3,842,312	+				+0.3
3,842,318	+				+0.9
3,842,319	-				-1.4
3,842,319	-				+0.6
3,842,321	-				+1.0
3,842,332	+				-0.3
3,842,432	+				+0.1
3,842,432	+				-0.6
3,842,432	+				+1.0
3,842,432	+				-3.1
3,842,433	-				-0.5
3,842,433	-				+2.5
3,842,433	-				-0.9
3,842,433	-				-3.0
3,842,433	-				-0.8
3,842,433	-				-0.9
3,842,433	-				-1.7
3,842,433	-				-0.3
3,842,433	-				-0.3
3,842,433	-				+0.8
3,842,472	+				+1.7
3,842,473	-				+2.0
3,842,473	-				-0.6
3,842,473	-				-0.5
3,842,476	-				+0.4
3,842,476	-				-0.8
3,842,510	-				-0.1
3,842,553	-				+1.3
3,842,592	-		OHPLBJKB_03659	0.15	-0.8
3,842,696	+		OHPLBJKB_03659	0.31	-1.2
3,842,699	+		OHPLBJKB_03659	0.31	-0.3
3,842,700	-		OHPLBJKB_03659	0.31	+0.7
3,842,708	+		OHPLBJKB_03659	0.32	+1.6
3,842,715	+		OHPLBJKB_03659	0.33	-0.2
3,842,721	+		OHPLBJKB_03659	0.34	-2.5
3,842,721	+		OHPLBJKB_03659	0.34	+1.0
3,842,722	-		OHPLBJKB_03659	0.34	-1.7
3,842,757	+		OHPLBJKB_03659	0.39	-0.8
3,842,913	+		OHPLBJKB_03659	0.62	+1.8
3,842,914	-		OHPLBJKB_03659	0.62	-2.2
3,842,914	-		OHPLBJKB_03659	0.62	-2.6
3,842,914	-		OHPLBJKB_03659	0.62	-0.6
3,842,914	-		OHPLBJKB_03659	0.62	-0.6
3,842,914	-		OHPLBJKB_03659	0.62	-2.0
3,842,919	+		OHPLBJKB_03659	0.63	-0.7