Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01175

Experiment: hib MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_01174 and OHPLBJKB_01175 are separated by 190 nucleotidesOHPLBJKB_01175 and OHPLBJKB_01176 are separated by 144 nucleotides OHPLBJKB_01174: OHPLBJKB_01174 - hypothetical protein, at 1,206,354 to 1,207,634 _01174 OHPLBJKB_01175: OHPLBJKB_01175 - hypothetical protein, at 1,207,825 to 1,208,679 _01175 OHPLBJKB_01176: OHPLBJKB_01176 - Inositol-1-monophosphatase, at 1,208,824 to 1,209,627 _01176 Position (kb) 1207 1208 1209Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1206.842 kb on + strand, within OHPLBJKB_01174at 1206.842 kb on + strand, within OHPLBJKB_01174at 1206.845 kb on - strand, within OHPLBJKB_01174at 1206.858 kb on + strand, within OHPLBJKB_01174at 1206.858 kb on + strand, within OHPLBJKB_01174at 1206.859 kb on - strand, within OHPLBJKB_01174at 1206.859 kb on - strand, within OHPLBJKB_01174at 1206.875 kb on - strand, within OHPLBJKB_01174at 1206.910 kb on - strand, within OHPLBJKB_01174at 1207.004 kb on + strand, within OHPLBJKB_01174at 1207.004 kb on + strand, within OHPLBJKB_01174at 1207.171 kb on + strand, within OHPLBJKB_01174at 1207.172 kb on - strand, within OHPLBJKB_01174at 1207.172 kb on - strand, within OHPLBJKB_01174at 1207.191 kb on - strand, within OHPLBJKB_01174at 1207.248 kb on + strand, within OHPLBJKB_01174at 1207.249 kb on - strand, within OHPLBJKB_01174at 1207.249 kb on - strand, within OHPLBJKB_01174at 1207.249 kb on - strand, within OHPLBJKB_01174at 1207.332 kb on - strand, within OHPLBJKB_01174at 1207.374 kb on + strand, within OHPLBJKB_01174at 1207.375 kb on - strand, within OHPLBJKB_01174at 1207.400 kb on + strand, within OHPLBJKB_01174at 1207.401 kb on - strand, within OHPLBJKB_01174at 1207.418 kb on + strand, within OHPLBJKB_01174at 1207.625 kb on + strandat 1207.626 kb on - strandat 1207.638 kb on + strandat 1207.638 kb on + strandat 1207.638 kb on + strandat 1207.638 kb on + strandat 1207.638 kb on + strandat 1207.638 kb on + strandat 1207.639 kb on - strandat 1207.655 kb on + strandat 1207.655 kb on + strandat 1207.655 kb on + strandat 1207.656 kb on - strandat 1207.668 kb on + strandat 1207.669 kb on - strandat 1207.669 kb on - strandat 1207.706 kb on + strandat 1207.706 kb on + strandat 1207.706 kb on + strandat 1207.707 kb on - strandat 1207.707 kb on - strandat 1207.752 kb on - strandat 1207.783 kb on + strandat 1207.784 kb on - strandat 1207.826 kb on + strandat 1207.826 kb on + strandat 1207.827 kb on - strandat 1207.930 kb on + strand, within OHPLBJKB_01175at 1207.930 kb on + strand, within OHPLBJKB_01175at 1207.963 kb on - strand, within OHPLBJKB_01175at 1207.964 kb on + strand, within OHPLBJKB_01175at 1207.964 kb on + strand, within OHPLBJKB_01175at 1207.965 kb on - strand, within OHPLBJKB_01175at 1207.965 kb on - strand, within OHPLBJKB_01175at 1207.965 kb on - strand, within OHPLBJKB_01175at 1208.020 kb on + strand, within OHPLBJKB_01175at 1208.021 kb on - strand, within OHPLBJKB_01175at 1208.021 kb on - strand, within OHPLBJKB_01175at 1208.051 kb on + strand, within OHPLBJKB_01175at 1208.066 kb on + strand, within OHPLBJKB_01175at 1208.066 kb on + strand, within OHPLBJKB_01175at 1208.067 kb on - strand, within OHPLBJKB_01175at 1208.067 kb on - strand, within OHPLBJKB_01175at 1208.080 kb on + strand, within OHPLBJKB_01175at 1208.080 kb on + strand, within OHPLBJKB_01175at 1208.080 kb on + strand, within OHPLBJKB_01175at 1208.081 kb on - strand, within OHPLBJKB_01175at 1208.081 kb on - strand, within OHPLBJKB_01175at 1208.084 kb on + strand, within OHPLBJKB_01175at 1208.084 kb on + strand, within OHPLBJKB_01175at 1208.123 kb on + strand, within OHPLBJKB_01175at 1208.124 kb on - strand, within OHPLBJKB_01175at 1208.124 kb on - strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.158 kb on + strand, within OHPLBJKB_01175at 1208.159 kb on - strand, within OHPLBJKB_01175at 1208.211 kb on + strand, within OHPLBJKB_01175at 1208.245 kb on + strand, within OHPLBJKB_01175at 1208.245 kb on + strand, within OHPLBJKB_01175at 1208.286 kb on + strand, within OHPLBJKB_01175at 1208.352 kb on + strand, within OHPLBJKB_01175at 1208.352 kb on + strand, within OHPLBJKB_01175at 1208.368 kb on - strand, within OHPLBJKB_01175at 1208.368 kb on - strand, within OHPLBJKB_01175at 1208.368 kb on - strand, within OHPLBJKB_01175at 1208.409 kb on + strand, within OHPLBJKB_01175at 1208.409 kb on + strand, within OHPLBJKB_01175at 1208.410 kb on - strand, within OHPLBJKB_01175at 1208.576 kb on + strand, within OHPLBJKB_01175at 1208.576 kb on + strand, within OHPLBJKB_01175at 1208.576 kb on + strand, within OHPLBJKB_01175at 1208.576 kb on + strand, within OHPLBJKB_01175at 1208.577 kb on - strand, within OHPLBJKB_01175at 1208.577 kb on - strand, within OHPLBJKB_01175at 1208.577 kb on - strand, within OHPLBJKB_01175at 1208.605 kb on + strandat 1208.610 kb on - strandat 1208.638 kb on - strandat 1208.702 kb on - strandat 1208.702 kb on - strandat 1208.712 kb on - strandat 1208.749 kb on + strandat 1208.765 kb on + strandat 1208.766 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction hib MOI1
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1,206,842 + OHPLBJKB_01174 0.38 +0.4
1,206,842 + OHPLBJKB_01174 0.38 +0.3
1,206,845 - OHPLBJKB_01174 0.38 -0.4
1,206,858 + OHPLBJKB_01174 0.39 -1.0
1,206,858 + OHPLBJKB_01174 0.39 +0.5
1,206,859 - OHPLBJKB_01174 0.39 +0.6
1,206,859 - OHPLBJKB_01174 0.39 -1.7
1,206,875 - OHPLBJKB_01174 0.41 +0.3
1,206,910 - OHPLBJKB_01174 0.43 -0.4
1,207,004 + OHPLBJKB_01174 0.51 -0.5
1,207,004 + OHPLBJKB_01174 0.51 -2.0
1,207,171 + OHPLBJKB_01174 0.64 +0.1
1,207,172 - OHPLBJKB_01174 0.64 +1.1
1,207,172 - OHPLBJKB_01174 0.64 -0.5
1,207,191 - OHPLBJKB_01174 0.65 -0.9
1,207,248 + OHPLBJKB_01174 0.70 -0.7
1,207,249 - OHPLBJKB_01174 0.70 -0.3
1,207,249 - OHPLBJKB_01174 0.70 -1.0
1,207,249 - OHPLBJKB_01174 0.70 +0.1
1,207,332 - OHPLBJKB_01174 0.76 +1.2
1,207,374 + OHPLBJKB_01174 0.80 +0.9
1,207,375 - OHPLBJKB_01174 0.80 +0.5
1,207,400 + OHPLBJKB_01174 0.82 -0.7
1,207,401 - OHPLBJKB_01174 0.82 +1.2
1,207,418 + OHPLBJKB_01174 0.83 -1.5
1,207,625 + -0.8
1,207,626 - -0.4
1,207,638 + +0.7
1,207,638 + -0.3
1,207,638 + +0.2
1,207,638 + +0.4
1,207,638 + +0.0
1,207,638 + +0.7
1,207,639 - -1.3
1,207,655 + +0.7
1,207,655 + +0.6
1,207,655 + -0.1
1,207,656 - -0.6
1,207,668 + -1.6
1,207,669 - -0.6
1,207,669 - +1.0
1,207,706 + +1.5
1,207,706 + -1.4
1,207,706 + -1.0
1,207,707 - +0.5
1,207,707 - -2.8
1,207,752 - -1.2
1,207,783 + -0.7
1,207,784 - +0.4
1,207,826 + -1.0
1,207,826 + -2.5
1,207,827 - -1.7
1,207,930 + OHPLBJKB_01175 0.12 +0.1
1,207,930 + OHPLBJKB_01175 0.12 -0.3
1,207,963 - OHPLBJKB_01175 0.16 -0.8
1,207,964 + OHPLBJKB_01175 0.16 -1.0
1,207,964 + OHPLBJKB_01175 0.16 -0.6
1,207,965 - OHPLBJKB_01175 0.16 -0.1
1,207,965 - OHPLBJKB_01175 0.16 -0.9
1,207,965 - OHPLBJKB_01175 0.16 +0.0
1,208,020 + OHPLBJKB_01175 0.23 -0.5
1,208,021 - OHPLBJKB_01175 0.23 +0.8
1,208,021 - OHPLBJKB_01175 0.23 -0.1
1,208,051 + OHPLBJKB_01175 0.26 -0.8
1,208,066 + OHPLBJKB_01175 0.28 -0.0
1,208,066 + OHPLBJKB_01175 0.28 +0.4
1,208,067 - OHPLBJKB_01175 0.28 -0.7
1,208,067 - OHPLBJKB_01175 0.28 +0.1
1,208,080 + OHPLBJKB_01175 0.30 -2.1
1,208,080 + OHPLBJKB_01175 0.30 -0.8
1,208,080 + OHPLBJKB_01175 0.30 -2.0
1,208,081 - OHPLBJKB_01175 0.30 +1.0
1,208,081 - OHPLBJKB_01175 0.30 -1.4
1,208,084 + OHPLBJKB_01175 0.30 +0.7
1,208,084 + OHPLBJKB_01175 0.30 -0.5
1,208,123 + OHPLBJKB_01175 0.35 +0.3
1,208,124 - OHPLBJKB_01175 0.35 +0.6
1,208,124 - OHPLBJKB_01175 0.35 +0.4
1,208,158 + OHPLBJKB_01175 0.39 -0.8
1,208,158 + OHPLBJKB_01175 0.39 -1.6
1,208,158 + OHPLBJKB_01175 0.39 -1.0
1,208,158 + OHPLBJKB_01175 0.39 -0.8
1,208,158 + OHPLBJKB_01175 0.39 -0.5
1,208,158 + OHPLBJKB_01175 0.39 -0.6
1,208,158 + OHPLBJKB_01175 0.39 -1.6
1,208,158 + OHPLBJKB_01175 0.39 -0.8
1,208,159 - OHPLBJKB_01175 0.39 -1.3
1,208,211 + OHPLBJKB_01175 0.45 +0.2
1,208,245 + OHPLBJKB_01175 0.49 -0.7
1,208,245 + OHPLBJKB_01175 0.49 +0.7
1,208,286 + OHPLBJKB_01175 0.54 +0.5
1,208,352 + OHPLBJKB_01175 0.62 +0.6
1,208,352 + OHPLBJKB_01175 0.62 -1.1
1,208,368 - OHPLBJKB_01175 0.64 +0.1
1,208,368 - OHPLBJKB_01175 0.64 -0.3
1,208,368 - OHPLBJKB_01175 0.64 +1.6
1,208,409 + OHPLBJKB_01175 0.68 -1.9
1,208,409 + OHPLBJKB_01175 0.68 +2.5
1,208,410 - OHPLBJKB_01175 0.68 +1.0
1,208,576 + OHPLBJKB_01175 0.88 -1.5
1,208,576 + OHPLBJKB_01175 0.88 -1.5
1,208,576 + OHPLBJKB_01175 0.88 +1.3
1,208,576 + OHPLBJKB_01175 0.88 +0.1
1,208,577 - OHPLBJKB_01175 0.88 +0.2
1,208,577 - OHPLBJKB_01175 0.88 -0.4
1,208,577 - OHPLBJKB_01175 0.88 +0.1
1,208,605 + -1.0
1,208,610 - +0.3
1,208,638 - +1.6
1,208,702 - +2.6
1,208,702 - -1.4
1,208,712 - +0.9
1,208,749 + -0.7
1,208,765 + -0.7
1,208,766 - -0.8

Or see this region's nucleotide sequence