Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03165

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03164 and MPMX26_03165 overlap by 4 nucleotidesMPMX26_03165 and MPMX26_03166 are separated by 18 nucleotidesMPMX26_03166 and MPMX26_03167 are separated by 140 nucleotides MPMX26_03164: MPMX26_03164 - Thiol:disulfide interchange protein DsbD, at 18,836 to 20,764 _03164 MPMX26_03165: MPMX26_03165 - Thiol-disulfide oxidoreductase ResA, at 20,761 to 21,606 _03165 MPMX26_03166: MPMX26_03166 - Thiol:disulfide interchange protein DsbG, at 21,625 to 22,374 _03166 MPMX26_03167: MPMX26_03167 - IS6 family transposase ISOur1, at 22,515 to 23,219 _03167 Position (kb) 20 21 22Strain fitness (log2 ratio) -2 -1 0 1 2at 19.862 kb on + strand, within MPMX26_03164at 19.872 kb on + strand, within MPMX26_03164at 19.960 kb on + strand, within MPMX26_03164at 19.960 kb on + strand, within MPMX26_03164at 19.960 kb on + strand, within MPMX26_03164at 19.968 kb on - strand, within MPMX26_03164at 20.084 kb on + strand, within MPMX26_03164at 20.112 kb on - strand, within MPMX26_03164at 20.142 kb on + strand, within MPMX26_03164at 20.147 kb on + strand, within MPMX26_03164at 20.153 kb on + strand, within MPMX26_03164at 20.271 kb on + strand, within MPMX26_03164at 20.371 kb on - strand, within MPMX26_03164at 20.373 kb on + strand, within MPMX26_03164at 20.387 kb on + strand, within MPMX26_03164at 20.395 kb on - strand, within MPMX26_03164at 20.400 kb on - strand, within MPMX26_03164at 20.410 kb on + strand, within MPMX26_03164at 20.410 kb on + strand, within MPMX26_03164at 20.410 kb on + strand, within MPMX26_03164at 20.418 kb on - strand, within MPMX26_03164at 20.431 kb on + strand, within MPMX26_03164at 20.434 kb on - strand, within MPMX26_03164at 20.439 kb on - strand, within MPMX26_03164at 20.449 kb on + strand, within MPMX26_03164at 20.473 kb on - strand, within MPMX26_03164at 20.485 kb on + strand, within MPMX26_03164at 20.498 kb on - strand, within MPMX26_03164at 20.577 kb on - strandat 20.669 kb on + strandat 20.727 kb on - strandat 20.740 kb on + strandat 20.776 kb on + strandat 20.797 kb on + strandat 20.804 kb on + strandat 20.805 kb on - strandat 20.883 kb on + strand, within MPMX26_03165at 20.883 kb on + strand, within MPMX26_03165at 20.891 kb on - strand, within MPMX26_03165at 20.946 kb on - strand, within MPMX26_03165at 21.029 kb on + strand, within MPMX26_03165at 21.039 kb on + strand, within MPMX26_03165at 21.056 kb on + strand, within MPMX26_03165at 21.102 kb on + strand, within MPMX26_03165at 21.135 kb on + strand, within MPMX26_03165at 21.266 kb on + strand, within MPMX26_03165at 21.408 kb on - strand, within MPMX26_03165at 21.427 kb on - strand, within MPMX26_03165at 21.503 kb on - strand, within MPMX26_03165at 21.515 kb on + strand, within MPMX26_03165at 21.528 kb on - strandat 21.557 kb on + strandat 21.637 kb on + strandat 21.679 kb on + strandat 21.776 kb on + strand, within MPMX26_03166at 21.776 kb on + strand, within MPMX26_03166at 21.945 kb on + strand, within MPMX26_03166at 21.945 kb on + strand, within MPMX26_03166at 21.962 kb on - strand, within MPMX26_03166at 21.988 kb on + strand, within MPMX26_03166at 21.988 kb on + strand, within MPMX26_03166at 21.996 kb on - strand, within MPMX26_03166at 21.996 kb on - strand, within MPMX26_03166at 22.089 kb on + strand, within MPMX26_03166at 22.092 kb on - strand, within MPMX26_03166at 22.092 kb on - strand, within MPMX26_03166at 22.112 kb on + strand, within MPMX26_03166at 22.123 kb on - strand, within MPMX26_03166at 22.147 kb on - strand, within MPMX26_03166at 22.319 kb on + strandat 22.330 kb on + strandat 22.338 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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19,862 + MPMX26_03164 0.53 -0.2
19,872 + MPMX26_03164 0.54 -1.3
19,960 + MPMX26_03164 0.58 -0.0
19,960 + MPMX26_03164 0.58 +0.3
19,960 + MPMX26_03164 0.58 +0.1
19,968 - MPMX26_03164 0.59 +1.7
20,084 + MPMX26_03164 0.65 +0.1
20,112 - MPMX26_03164 0.66 +0.1
20,142 + MPMX26_03164 0.68 +0.0
20,147 + MPMX26_03164 0.68 +0.1
20,153 + MPMX26_03164 0.68 -0.3
20,271 + MPMX26_03164 0.74 -2.1
20,371 - MPMX26_03164 0.80 -1.2
20,373 + MPMX26_03164 0.80 +1.0
20,387 + MPMX26_03164 0.80 +0.3
20,395 - MPMX26_03164 0.81 +0.0
20,400 - MPMX26_03164 0.81 +0.1
20,410 + MPMX26_03164 0.82 -0.3
20,410 + MPMX26_03164 0.82 +0.4
20,410 + MPMX26_03164 0.82 +1.7
20,418 - MPMX26_03164 0.82 -0.2
20,431 + MPMX26_03164 0.83 +0.9
20,434 - MPMX26_03164 0.83 +0.1
20,439 - MPMX26_03164 0.83 +0.7
20,449 + MPMX26_03164 0.84 +0.8
20,473 - MPMX26_03164 0.85 +0.4
20,485 + MPMX26_03164 0.85 -0.8
20,498 - MPMX26_03164 0.86 -0.5
20,577 - +0.7
20,669 + +1.7
20,727 - +1.7
20,740 + +2.4
20,776 + +0.1
20,797 + -0.3
20,804 + +1.2
20,805 - +1.9
20,883 + MPMX26_03165 0.14 -0.9
20,883 + MPMX26_03165 0.14 +0.1
20,891 - MPMX26_03165 0.15 -0.1
20,946 - MPMX26_03165 0.22 -0.3
21,029 + MPMX26_03165 0.32 -1.5
21,039 + MPMX26_03165 0.33 +1.4
21,056 + MPMX26_03165 0.35 +0.3
21,102 + MPMX26_03165 0.40 -0.3
21,135 + MPMX26_03165 0.44 -0.6
21,266 + MPMX26_03165 0.60 +0.9
21,408 - MPMX26_03165 0.76 -0.9
21,427 - MPMX26_03165 0.79 +1.7
21,503 - MPMX26_03165 0.88 +0.5
21,515 + MPMX26_03165 0.89 -0.5
21,528 - -0.8
21,557 + +0.3
21,637 + +1.0
21,679 + -1.0
21,776 + MPMX26_03166 0.20 +1.0
21,776 + MPMX26_03166 0.20 +0.3
21,945 + MPMX26_03166 0.43 -0.2
21,945 + MPMX26_03166 0.43 +0.6
21,962 - MPMX26_03166 0.45 +1.2
21,988 + MPMX26_03166 0.48 -1.7
21,988 + MPMX26_03166 0.48 +0.1
21,996 - MPMX26_03166 0.49 -1.2
21,996 - MPMX26_03166 0.49 +0.2
22,089 + MPMX26_03166 0.62 -1.2
22,092 - MPMX26_03166 0.62 +1.3
22,092 - MPMX26_03166 0.62 +0.1
22,112 + MPMX26_03166 0.65 +0.0
22,123 - MPMX26_03166 0.66 -0.5
22,147 - MPMX26_03166 0.70 +0.4
22,319 + +0.3
22,330 + +1.1
22,338 - +1.3

Or see this region's nucleotide sequence