Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02427

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02425 and MPMX26_02426 are separated by 127 nucleotidesMPMX26_02426 and MPMX26_02427 are separated by 19 nucleotidesMPMX26_02427 and MPMX26_02428 are separated by 11 nucleotidesMPMX26_02428 and MPMX26_02429 are separated by 105 nucleotides MPMX26_02425: MPMX26_02425 - Thioredoxin reductase, at 2,511,238 to 2,512,197 _02425 MPMX26_02426: MPMX26_02426 - Leucyl/phenylalanyl-tRNA--protein transferase, at 2,512,325 to 2,513,056 _02426 MPMX26_02427: MPMX26_02427 - Aspartate/glutamate leucyltransferase, at 2,513,076 to 2,513,891 _02427 MPMX26_02428: MPMX26_02428 - [Ribosomal protein S18]-alanine N-acetyltransferase, at 2,513,903 to 2,514,361 _02428 MPMX26_02429: MPMX26_02429 - hypothetical protein, at 2,514,467 to 2,515,342 _02429 Position (kb) 2513 2514Strain fitness (log2 ratio) -2 -1 0 1at 2512.086 kb on + strand, within MPMX26_02425at 2512.117 kb on + strandat 2512.117 kb on + strandat 2512.117 kb on + strandat 2512.117 kb on + strandat 2512.132 kb on + strandat 2512.132 kb on + strandat 2512.132 kb on + strandat 2512.140 kb on + strandat 2512.142 kb on + strandat 2512.142 kb on + strandat 2512.142 kb on + strandat 2512.492 kb on + strand, within MPMX26_02426at 2512.574 kb on + strand, within MPMX26_02426at 2512.577 kb on + strand, within MPMX26_02426at 2512.609 kb on + strand, within MPMX26_02426at 2512.625 kb on + strand, within MPMX26_02426at 2512.673 kb on + strand, within MPMX26_02426at 2512.693 kb on + strand, within MPMX26_02426at 2512.718 kb on + strand, within MPMX26_02426at 2512.753 kb on + strand, within MPMX26_02426at 2512.777 kb on + strand, within MPMX26_02426at 2512.906 kb on + strand, within MPMX26_02426at 2513.090 kb on + strandat 2513.090 kb on + strandat 2513.133 kb on + strandat 2513.295 kb on - strand, within MPMX26_02427at 2513.421 kb on + strand, within MPMX26_02427at 2513.421 kb on + strand, within MPMX26_02427at 2513.421 kb on + strand, within MPMX26_02427at 2513.421 kb on + strand, within MPMX26_02427at 2513.454 kb on + strand, within MPMX26_02427at 2513.454 kb on + strand, within MPMX26_02427at 2513.454 kb on + strand, within MPMX26_02427at 2513.454 kb on + strand, within MPMX26_02427at 2513.460 kb on + strand, within MPMX26_02427at 2513.502 kb on + strand, within MPMX26_02427at 2513.502 kb on + strand, within MPMX26_02427at 2513.502 kb on + strand, within MPMX26_02427at 2513.502 kb on + strand, within MPMX26_02427at 2513.502 kb on + strand, within MPMX26_02427at 2513.507 kb on + strand, within MPMX26_02427at 2513.545 kb on - strand, within MPMX26_02427at 2513.638 kb on + strand, within MPMX26_02427at 2513.689 kb on + strand, within MPMX26_02427at 2513.834 kb on + strandat 2513.834 kb on + strandat 2513.834 kb on + strandat 2513.844 kb on + strandat 2513.854 kb on - strandat 2513.877 kb on - strandat 2513.939 kb on - strandat 2513.939 kb on - strandat 2513.939 kb on - strandat 2513.939 kb on - strandat 2513.939 kb on - strandat 2513.939 kb on - strandat 2513.967 kb on - strand, within MPMX26_02428at 2513.968 kb on - strand, within MPMX26_02428at 2513.975 kb on - strand, within MPMX26_02428at 2514.053 kb on - strand, within MPMX26_02428at 2514.131 kb on - strand, within MPMX26_02428at 2514.131 kb on - strand, within MPMX26_02428at 2514.131 kb on - strand, within MPMX26_02428at 2514.131 kb on - strand, within MPMX26_02428at 2514.131 kb on - strand, within MPMX26_02428at 2514.136 kb on - strand, within MPMX26_02428at 2514.136 kb on - strand, within MPMX26_02428at 2514.182 kb on - strand, within MPMX26_02428at 2514.197 kb on - strand, within MPMX26_02428at 2514.241 kb on - strand, within MPMX26_02428at 2514.241 kb on - strand, within MPMX26_02428at 2514.241 kb on - strand, within MPMX26_02428at 2514.241 kb on - strand, within MPMX26_02428at 2514.248 kb on - strand, within MPMX26_02428at 2514.255 kb on - strand, within MPMX26_02428at 2514.305 kb on - strand, within MPMX26_02428at 2514.370 kb on - strandat 2514.856 kb on + strand, within MPMX26_02429

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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2,512,086 + MPMX26_02425 0.88 +0.5
2,512,117 + +0.2
2,512,117 + +0.1
2,512,117 + +0.1
2,512,117 + +0.9
2,512,132 + -0.0
2,512,132 + +0.0
2,512,132 + -0.1
2,512,140 + +0.0
2,512,142 + -0.7
2,512,142 + -0.3
2,512,142 + -0.0
2,512,492 + MPMX26_02426 0.23 +1.0
2,512,574 + MPMX26_02426 0.34 +0.1
2,512,577 + MPMX26_02426 0.34 -0.4
2,512,609 + MPMX26_02426 0.39 +0.5
2,512,625 + MPMX26_02426 0.41 -0.6
2,512,673 + MPMX26_02426 0.48 +0.0
2,512,693 + MPMX26_02426 0.50 -0.7
2,512,718 + MPMX26_02426 0.54 -0.2
2,512,753 + MPMX26_02426 0.58 +0.3
2,512,777 + MPMX26_02426 0.62 +0.2
2,512,906 + MPMX26_02426 0.79 +0.4
2,513,090 + -1.3
2,513,090 + -0.2
2,513,133 + -1.3
2,513,295 - MPMX26_02427 0.27 -1.3
2,513,421 + MPMX26_02427 0.42 +0.3
2,513,421 + MPMX26_02427 0.42 -0.8
2,513,421 + MPMX26_02427 0.42 -0.4
2,513,421 + MPMX26_02427 0.42 -0.3
2,513,454 + MPMX26_02427 0.46 -0.1
2,513,454 + MPMX26_02427 0.46 -1.0
2,513,454 + MPMX26_02427 0.46 -0.9
2,513,454 + MPMX26_02427 0.46 -0.6
2,513,460 + MPMX26_02427 0.47 -0.1
2,513,502 + MPMX26_02427 0.52 -0.8
2,513,502 + MPMX26_02427 0.52 +1.0
2,513,502 + MPMX26_02427 0.52 +0.3
2,513,502 + MPMX26_02427 0.52 -0.6
2,513,502 + MPMX26_02427 0.52 -2.1
2,513,507 + MPMX26_02427 0.53 +0.1
2,513,545 - MPMX26_02427 0.57 -0.7
2,513,638 + MPMX26_02427 0.69 +0.4
2,513,689 + MPMX26_02427 0.75 -1.5
2,513,834 + -0.9
2,513,834 + +0.8
2,513,834 + +0.1
2,513,844 + +0.2
2,513,854 - +0.4
2,513,877 - +0.8
2,513,939 - +0.1
2,513,939 - -0.2
2,513,939 - -0.3
2,513,939 - -0.3
2,513,939 - +0.4
2,513,939 - -1.3
2,513,967 - MPMX26_02428 0.14 -0.7
2,513,968 - MPMX26_02428 0.14 -0.1
2,513,975 - MPMX26_02428 0.16 -0.9
2,514,053 - MPMX26_02428 0.33 +0.7
2,514,131 - MPMX26_02428 0.50 -0.1
2,514,131 - MPMX26_02428 0.50 -0.2
2,514,131 - MPMX26_02428 0.50 -1.2
2,514,131 - MPMX26_02428 0.50 -0.1
2,514,131 - MPMX26_02428 0.50 -0.5
2,514,136 - MPMX26_02428 0.51 -0.2
2,514,136 - MPMX26_02428 0.51 +0.3
2,514,182 - MPMX26_02428 0.61 -0.1
2,514,197 - MPMX26_02428 0.64 -0.1
2,514,241 - MPMX26_02428 0.74 -0.4
2,514,241 - MPMX26_02428 0.74 -0.9
2,514,241 - MPMX26_02428 0.74 -0.2
2,514,241 - MPMX26_02428 0.74 -0.1
2,514,248 - MPMX26_02428 0.75 -0.9
2,514,255 - MPMX26_02428 0.77 +0.1
2,514,305 - MPMX26_02428 0.88 -0.4
2,514,370 - +0.6
2,514,856 + MPMX26_02429 0.44 +1.2

Or see this region's nucleotide sequence