Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02323

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02322 and MPMX26_02323 are separated by 167 nucleotidesMPMX26_02323 and MPMX26_02324 are separated by 305 nucleotides MPMX26_02322: MPMX26_02322 - hypothetical protein, at 2,393,036 to 2,393,542 _02322 MPMX26_02323: MPMX26_02323 - Phthiocerol synthesis polyketide synthase type I PpsC, at 2,393,710 to 2,394,705 _02323 MPMX26_02324: MPMX26_02324 - hypothetical protein, at 2,395,011 to 2,397,413 _02324 Position (kb) 2393 2394 2395Strain fitness (log2 ratio) -1 0 1at 2393.063 kb on - strandat 2393.065 kb on - strandat 2393.128 kb on - strand, within MPMX26_02322at 2393.167 kb on + strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.175 kb on - strand, within MPMX26_02322at 2393.225 kb on - strand, within MPMX26_02322at 2393.230 kb on - strand, within MPMX26_02322at 2393.230 kb on - strand, within MPMX26_02322at 2393.240 kb on - strand, within MPMX26_02322at 2393.240 kb on - strand, within MPMX26_02322at 2393.279 kb on - strand, within MPMX26_02322at 2393.334 kb on - strand, within MPMX26_02322at 2393.334 kb on - strand, within MPMX26_02322at 2393.334 kb on - strand, within MPMX26_02322at 2393.334 kb on - strand, within MPMX26_02322at 2393.340 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.346 kb on - strand, within MPMX26_02322at 2393.353 kb on - strand, within MPMX26_02322at 2393.353 kb on - strand, within MPMX26_02322at 2393.353 kb on - strand, within MPMX26_02322at 2393.384 kb on - strand, within MPMX26_02322at 2393.384 kb on - strand, within MPMX26_02322at 2393.384 kb on - strand, within MPMX26_02322at 2393.419 kb on - strand, within MPMX26_02322at 2393.426 kb on - strand, within MPMX26_02322at 2393.426 kb on - strand, within MPMX26_02322at 2393.426 kb on - strand, within MPMX26_02322at 2393.426 kb on - strand, within MPMX26_02322at 2393.426 kb on - strand, within MPMX26_02322at 2393.426 kb on - strand, within MPMX26_02322at 2393.470 kb on - strand, within MPMX26_02322at 2393.494 kb on - strandat 2393.519 kb on - strandat 2393.519 kb on - strandat 2393.529 kb on - strandat 2393.529 kb on - strandat 2393.529 kb on - strandat 2393.539 kb on - strandat 2393.539 kb on - strandat 2393.539 kb on - strandat 2393.742 kb on - strandat 2393.755 kb on - strandat 2393.779 kb on - strandat 2393.925 kb on - strand, within MPMX26_02323at 2393.925 kb on - strand, within MPMX26_02323at 2394.010 kb on - strand, within MPMX26_02323at 2394.010 kb on - strand, within MPMX26_02323at 2394.010 kb on - strand, within MPMX26_02323at 2394.064 kb on - strand, within MPMX26_02323at 2394.071 kb on - strand, within MPMX26_02323at 2394.076 kb on - strand, within MPMX26_02323at 2394.076 kb on - strand, within MPMX26_02323at 2394.081 kb on - strand, within MPMX26_02323at 2394.093 kb on - strand, within MPMX26_02323at 2394.100 kb on - strand, within MPMX26_02323at 2394.117 kb on - strand, within MPMX26_02323at 2394.117 kb on - strand, within MPMX26_02323at 2394.117 kb on - strand, within MPMX26_02323at 2394.211 kb on - strand, within MPMX26_02323at 2394.222 kb on - strand, within MPMX26_02323at 2394.222 kb on - strand, within MPMX26_02323at 2394.222 kb on - strand, within MPMX26_02323at 2394.261 kb on - strand, within MPMX26_02323at 2394.279 kb on - strand, within MPMX26_02323at 2394.280 kb on - strand, within MPMX26_02323at 2394.285 kb on - strand, within MPMX26_02323at 2394.285 kb on - strand, within MPMX26_02323at 2394.286 kb on - strand, within MPMX26_02323at 2394.305 kb on - strand, within MPMX26_02323at 2394.346 kb on - strand, within MPMX26_02323at 2394.346 kb on - strand, within MPMX26_02323at 2394.350 kb on - strand, within MPMX26_02323at 2394.355 kb on - strand, within MPMX26_02323at 2394.376 kb on - strand, within MPMX26_02323at 2394.376 kb on - strand, within MPMX26_02323at 2394.382 kb on - strand, within MPMX26_02323at 2394.417 kb on - strand, within MPMX26_02323at 2394.417 kb on - strand, within MPMX26_02323at 2394.424 kb on - strand, within MPMX26_02323at 2394.424 kb on - strand, within MPMX26_02323at 2394.424 kb on - strand, within MPMX26_02323at 2394.424 kb on - strand, within MPMX26_02323at 2394.431 kb on - strand, within MPMX26_02323at 2394.454 kb on - strand, within MPMX26_02323at 2394.454 kb on - strand, within MPMX26_02323at 2394.454 kb on - strand, within MPMX26_02323at 2394.484 kb on - strand, within MPMX26_02323at 2394.484 kb on - strand, within MPMX26_02323at 2394.484 kb on - strand, within MPMX26_02323at 2394.484 kb on - strand, within MPMX26_02323at 2394.484 kb on - strand, within MPMX26_02323at 2394.511 kb on - strand, within MPMX26_02323at 2394.519 kb on + strand, within MPMX26_02323at 2394.521 kb on - strand, within MPMX26_02323at 2394.527 kb on - strand, within MPMX26_02323at 2394.571 kb on - strand, within MPMX26_02323at 2394.616 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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2,393,063 - +0.1
2,393,065 - -0.5
2,393,128 - MPMX26_02322 0.18 -0.8
2,393,167 + MPMX26_02322 0.26 -0.7
2,393,175 - MPMX26_02322 0.27 +0.3
2,393,175 - MPMX26_02322 0.27 +0.3
2,393,175 - MPMX26_02322 0.27 -0.1
2,393,175 - MPMX26_02322 0.27 +0.2
2,393,175 - MPMX26_02322 0.27 +0.3
2,393,175 - MPMX26_02322 0.27 -0.2
2,393,175 - MPMX26_02322 0.27 +0.2
2,393,175 - MPMX26_02322 0.27 -0.0
2,393,175 - MPMX26_02322 0.27 -0.2
2,393,175 - MPMX26_02322 0.27 +0.1
2,393,225 - MPMX26_02322 0.37 +0.1
2,393,230 - MPMX26_02322 0.38 +0.6
2,393,230 - MPMX26_02322 0.38 +0.1
2,393,240 - MPMX26_02322 0.40 -0.0
2,393,240 - MPMX26_02322 0.40 +0.1
2,393,279 - MPMX26_02322 0.48 -0.1
2,393,334 - MPMX26_02322 0.59 -0.5
2,393,334 - MPMX26_02322 0.59 +0.3
2,393,334 - MPMX26_02322 0.59 +0.3
2,393,334 - MPMX26_02322 0.59 -0.5
2,393,340 - MPMX26_02322 0.60 -0.3
2,393,346 - MPMX26_02322 0.61 -0.6
2,393,346 - MPMX26_02322 0.61 +0.2
2,393,346 - MPMX26_02322 0.61 -0.6
2,393,346 - MPMX26_02322 0.61 -0.5
2,393,346 - MPMX26_02322 0.61 -0.8
2,393,346 - MPMX26_02322 0.61 -0.1
2,393,346 - MPMX26_02322 0.61 +0.6
2,393,346 - MPMX26_02322 0.61 +0.6
2,393,353 - MPMX26_02322 0.63 -0.1
2,393,353 - MPMX26_02322 0.63 -0.1
2,393,353 - MPMX26_02322 0.63 +0.1
2,393,384 - MPMX26_02322 0.69 +0.1
2,393,384 - MPMX26_02322 0.69 -0.1
2,393,384 - MPMX26_02322 0.69 -0.1
2,393,419 - MPMX26_02322 0.76 +1.4
2,393,426 - MPMX26_02322 0.77 -0.1
2,393,426 - MPMX26_02322 0.77 +0.0
2,393,426 - MPMX26_02322 0.77 -0.0
2,393,426 - MPMX26_02322 0.77 +0.2
2,393,426 - MPMX26_02322 0.77 +0.5
2,393,426 - MPMX26_02322 0.77 +0.2
2,393,470 - MPMX26_02322 0.86 +0.2
2,393,494 - +0.6
2,393,519 - -0.2
2,393,519 - +0.4
2,393,529 - -0.2
2,393,529 - +0.5
2,393,529 - -0.1
2,393,539 - -0.2
2,393,539 - +0.1
2,393,539 - +0.3
2,393,742 - +0.1
2,393,755 - -0.3
2,393,779 - +0.9
2,393,925 - MPMX26_02323 0.22 +0.4
2,393,925 - MPMX26_02323 0.22 +1.0
2,394,010 - MPMX26_02323 0.30 -0.2
2,394,010 - MPMX26_02323 0.30 -0.0
2,394,010 - MPMX26_02323 0.30 +0.2
2,394,064 - MPMX26_02323 0.36 +0.7
2,394,071 - MPMX26_02323 0.36 +0.7
2,394,076 - MPMX26_02323 0.37 -0.1
2,394,076 - MPMX26_02323 0.37 +0.2
2,394,081 - MPMX26_02323 0.37 -0.3
2,394,093 - MPMX26_02323 0.38 +0.2
2,394,100 - MPMX26_02323 0.39 +0.1
2,394,117 - MPMX26_02323 0.41 -0.3
2,394,117 - MPMX26_02323 0.41 -1.1
2,394,117 - MPMX26_02323 0.41 -0.7
2,394,211 - MPMX26_02323 0.50 -0.1
2,394,222 - MPMX26_02323 0.51 +0.5
2,394,222 - MPMX26_02323 0.51 +0.1
2,394,222 - MPMX26_02323 0.51 +0.6
2,394,261 - MPMX26_02323 0.55 +0.0
2,394,279 - MPMX26_02323 0.57 +0.4
2,394,280 - MPMX26_02323 0.57 +0.5
2,394,285 - MPMX26_02323 0.58 +0.2
2,394,285 - MPMX26_02323 0.58 +0.3
2,394,286 - MPMX26_02323 0.58 -0.1
2,394,305 - MPMX26_02323 0.60 -0.3
2,394,346 - MPMX26_02323 0.64 +0.4
2,394,346 - MPMX26_02323 0.64 -0.1
2,394,350 - MPMX26_02323 0.64 +1.1
2,394,355 - MPMX26_02323 0.65 +0.2
2,394,376 - MPMX26_02323 0.67 +0.2
2,394,376 - MPMX26_02323 0.67 +1.0
2,394,382 - MPMX26_02323 0.67 +0.9
2,394,417 - MPMX26_02323 0.71 +0.5
2,394,417 - MPMX26_02323 0.71 +0.2
2,394,424 - MPMX26_02323 0.72 -0.7
2,394,424 - MPMX26_02323 0.72 +0.3
2,394,424 - MPMX26_02323 0.72 +0.5
2,394,424 - MPMX26_02323 0.72 -0.5
2,394,431 - MPMX26_02323 0.72 +0.2
2,394,454 - MPMX26_02323 0.75 +0.2
2,394,454 - MPMX26_02323 0.75 +0.1
2,394,454 - MPMX26_02323 0.75 +0.1
2,394,484 - MPMX26_02323 0.78 -0.4
2,394,484 - MPMX26_02323 0.78 -0.5
2,394,484 - MPMX26_02323 0.78 +0.5
2,394,484 - MPMX26_02323 0.78 +0.1
2,394,484 - MPMX26_02323 0.78 -0.8
2,394,511 - MPMX26_02323 0.80 -0.1
2,394,519 + MPMX26_02323 0.81 +0.4
2,394,521 - MPMX26_02323 0.81 -0.4
2,394,527 - MPMX26_02323 0.82 +1.0
2,394,571 - MPMX26_02323 0.86 +0.1
2,394,616 - -0.6

Or see this region's nucleotide sequence