Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02160

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02159 and MPMX26_02160 are separated by 174 nucleotidesMPMX26_02160 and MPMX26_02161 are separated by 123 nucleotides MPMX26_02159: MPMX26_02159 - Elongation factor 4, at 2,213,284 to 2,215,101 _02159 MPMX26_02160: MPMX26_02160 - hypothetical protein, at 2,215,276 to 2,215,719 _02160 MPMX26_02161: MPMX26_02161 - Periplasmic pH-dependent serine endoprotease DegQ, at 2,215,843 to 2,217,225 _02161 Position (kb) 2215 2216Strain fitness (log2 ratio) -2 -1 0 1at 2214.390 kb on - strand, within MPMX26_02159at 2214.598 kb on - strand, within MPMX26_02159at 2214.598 kb on - strand, within MPMX26_02159at 2214.664 kb on - strand, within MPMX26_02159at 2214.957 kb on - strandat 2215.002 kb on - strandat 2215.340 kb on - strand, within MPMX26_02160at 2215.423 kb on - strand, within MPMX26_02160at 2215.444 kb on - strand, within MPMX26_02160at 2215.462 kb on - strand, within MPMX26_02160at 2215.464 kb on - strand, within MPMX26_02160at 2215.533 kb on - strand, within MPMX26_02160at 2215.533 kb on - strand, within MPMX26_02160at 2215.533 kb on - strand, within MPMX26_02160at 2215.659 kb on - strand, within MPMX26_02160at 2215.898 kb on - strandat 2215.912 kb on - strandat 2215.912 kb on - strandat 2215.959 kb on - strandat 2215.959 kb on - strandat 2216.013 kb on - strand, within MPMX26_02161at 2216.013 kb on - strand, within MPMX26_02161at 2216.013 kb on - strand, within MPMX26_02161at 2216.013 kb on - strand, within MPMX26_02161at 2216.068 kb on - strand, within MPMX26_02161at 2216.109 kb on - strand, within MPMX26_02161at 2216.115 kb on - strand, within MPMX26_02161at 2216.115 kb on - strand, within MPMX26_02161at 2216.115 kb on - strand, within MPMX26_02161at 2216.115 kb on - strand, within MPMX26_02161at 2216.115 kb on - strand, within MPMX26_02161at 2216.115 kb on - strand, within MPMX26_02161at 2216.143 kb on - strand, within MPMX26_02161at 2216.176 kb on - strand, within MPMX26_02161at 2216.319 kb on - strand, within MPMX26_02161at 2216.328 kb on - strand, within MPMX26_02161at 2216.341 kb on - strand, within MPMX26_02161at 2216.341 kb on - strand, within MPMX26_02161at 2216.341 kb on - strand, within MPMX26_02161at 2216.379 kb on - strand, within MPMX26_02161at 2216.427 kb on - strand, within MPMX26_02161at 2216.524 kb on - strand, within MPMX26_02161at 2216.657 kb on - strand, within MPMX26_02161

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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2,214,390 - MPMX26_02159 0.61 -2.1
2,214,598 - MPMX26_02159 0.72 -0.1
2,214,598 - MPMX26_02159 0.72 -2.3
2,214,664 - MPMX26_02159 0.76 -0.6
2,214,957 - -0.5
2,215,002 - -0.6
2,215,340 - MPMX26_02160 0.14 -0.2
2,215,423 - MPMX26_02160 0.33 +0.7
2,215,444 - MPMX26_02160 0.38 +0.1
2,215,462 - MPMX26_02160 0.42 -0.3
2,215,464 - MPMX26_02160 0.42 -0.0
2,215,533 - MPMX26_02160 0.58 +0.4
2,215,533 - MPMX26_02160 0.58 -0.3
2,215,533 - MPMX26_02160 0.58 +0.7
2,215,659 - MPMX26_02160 0.86 +0.0
2,215,898 - +1.6
2,215,912 - -0.2
2,215,912 - +0.0
2,215,959 - +0.4
2,215,959 - -0.1
2,216,013 - MPMX26_02161 0.12 +0.3
2,216,013 - MPMX26_02161 0.12 +0.1
2,216,013 - MPMX26_02161 0.12 -0.0
2,216,013 - MPMX26_02161 0.12 -0.8
2,216,068 - MPMX26_02161 0.16 +0.2
2,216,109 - MPMX26_02161 0.19 +0.2
2,216,115 - MPMX26_02161 0.20 -0.6
2,216,115 - MPMX26_02161 0.20 +1.6
2,216,115 - MPMX26_02161 0.20 -0.2
2,216,115 - MPMX26_02161 0.20 +0.3
2,216,115 - MPMX26_02161 0.20 -0.1
2,216,115 - MPMX26_02161 0.20 +1.0
2,216,143 - MPMX26_02161 0.22 -0.2
2,216,176 - MPMX26_02161 0.24 -1.4
2,216,319 - MPMX26_02161 0.34 +0.5
2,216,328 - MPMX26_02161 0.35 -0.3
2,216,341 - MPMX26_02161 0.36 +0.0
2,216,341 - MPMX26_02161 0.36 -0.4
2,216,341 - MPMX26_02161 0.36 -0.1
2,216,379 - MPMX26_02161 0.39 -0.2
2,216,427 - MPMX26_02161 0.42 -0.1
2,216,524 - MPMX26_02161 0.49 -0.4
2,216,657 - MPMX26_02161 0.59 +0.1

Or see this region's nucleotide sequence