Experiment: Ammonium Nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02159 and MPMX26_02160 are separated by 174 nucleotides MPMX26_02160 and MPMX26_02161 are separated by 123 nucleotides
MPMX26_02159: MPMX26_02159 - Elongation factor 4, at 2,213,284 to 2,215,101
_02159
MPMX26_02160: MPMX26_02160 - hypothetical protein, at 2,215,276 to 2,215,719
_02160
MPMX26_02161: MPMX26_02161 - Periplasmic pH-dependent serine endoprotease DegQ, at 2,215,843 to 2,217,225
_02161
Position (kb)
2215
2216 Strain fitness (log2 ratio)
-2
-1
0
1 at 2214.390 kb on - strand, within MPMX26_02159 at 2214.598 kb on - strand, within MPMX26_02159 at 2214.598 kb on - strand, within MPMX26_02159 at 2214.664 kb on - strand, within MPMX26_02159 at 2214.957 kb on - strand at 2215.002 kb on - strand at 2215.340 kb on - strand, within MPMX26_02160 at 2215.423 kb on - strand, within MPMX26_02160 at 2215.444 kb on - strand, within MPMX26_02160 at 2215.462 kb on - strand, within MPMX26_02160 at 2215.464 kb on - strand, within MPMX26_02160 at 2215.533 kb on - strand, within MPMX26_02160 at 2215.533 kb on - strand, within MPMX26_02160 at 2215.533 kb on - strand, within MPMX26_02160 at 2215.659 kb on - strand, within MPMX26_02160 at 2215.898 kb on - strand at 2215.912 kb on - strand at 2215.912 kb on - strand at 2215.959 kb on - strand at 2215.959 kb on - strand at 2216.013 kb on - strand, within MPMX26_02161 at 2216.013 kb on - strand, within MPMX26_02161 at 2216.013 kb on - strand, within MPMX26_02161 at 2216.013 kb on - strand, within MPMX26_02161 at 2216.068 kb on - strand, within MPMX26_02161 at 2216.109 kb on - strand, within MPMX26_02161 at 2216.115 kb on - strand, within MPMX26_02161 at 2216.115 kb on - strand, within MPMX26_02161 at 2216.115 kb on - strand, within MPMX26_02161 at 2216.115 kb on - strand, within MPMX26_02161 at 2216.115 kb on - strand, within MPMX26_02161 at 2216.115 kb on - strand, within MPMX26_02161 at 2216.143 kb on - strand, within MPMX26_02161 at 2216.176 kb on - strand, within MPMX26_02161 at 2216.319 kb on - strand, within MPMX26_02161 at 2216.328 kb on - strand, within MPMX26_02161 at 2216.341 kb on - strand, within MPMX26_02161 at 2216.341 kb on - strand, within MPMX26_02161 at 2216.341 kb on - strand, within MPMX26_02161 at 2216.379 kb on - strand, within MPMX26_02161 at 2216.427 kb on - strand, within MPMX26_02161 at 2216.524 kb on - strand, within MPMX26_02161 at 2216.657 kb on - strand, within MPMX26_02161
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium Nitrate (N) remove 2,214,390 - MPMX26_02159 0.61 -2.1 2,214,598 - MPMX26_02159 0.72 -0.1 2,214,598 - MPMX26_02159 0.72 -2.3 2,214,664 - MPMX26_02159 0.76 -0.6 2,214,957 - -0.5 2,215,002 - -0.6 2,215,340 - MPMX26_02160 0.14 -0.2 2,215,423 - MPMX26_02160 0.33 +0.7 2,215,444 - MPMX26_02160 0.38 +0.1 2,215,462 - MPMX26_02160 0.42 -0.3 2,215,464 - MPMX26_02160 0.42 -0.0 2,215,533 - MPMX26_02160 0.58 +0.4 2,215,533 - MPMX26_02160 0.58 -0.3 2,215,533 - MPMX26_02160 0.58 +0.7 2,215,659 - MPMX26_02160 0.86 +0.0 2,215,898 - +1.6 2,215,912 - -0.2 2,215,912 - +0.0 2,215,959 - +0.4 2,215,959 - -0.1 2,216,013 - MPMX26_02161 0.12 +0.3 2,216,013 - MPMX26_02161 0.12 +0.1 2,216,013 - MPMX26_02161 0.12 -0.0 2,216,013 - MPMX26_02161 0.12 -0.8 2,216,068 - MPMX26_02161 0.16 +0.2 2,216,109 - MPMX26_02161 0.19 +0.2 2,216,115 - MPMX26_02161 0.20 -0.6 2,216,115 - MPMX26_02161 0.20 +1.6 2,216,115 - MPMX26_02161 0.20 -0.2 2,216,115 - MPMX26_02161 0.20 +0.3 2,216,115 - MPMX26_02161 0.20 -0.1 2,216,115 - MPMX26_02161 0.20 +1.0 2,216,143 - MPMX26_02161 0.22 -0.2 2,216,176 - MPMX26_02161 0.24 -1.4 2,216,319 - MPMX26_02161 0.34 +0.5 2,216,328 - MPMX26_02161 0.35 -0.3 2,216,341 - MPMX26_02161 0.36 +0.0 2,216,341 - MPMX26_02161 0.36 -0.4 2,216,341 - MPMX26_02161 0.36 -0.1 2,216,379 - MPMX26_02161 0.39 -0.2 2,216,427 - MPMX26_02161 0.42 -0.1 2,216,524 - MPMX26_02161 0.49 -0.4 2,216,657 - MPMX26_02161 0.59 +0.1
Or see this region's nucleotide sequence