Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01701

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01699 and MPMX26_01700 are separated by 18 nucleotidesMPMX26_01700 and MPMX26_01701 are separated by 45 nucleotidesMPMX26_01701 and MPMX26_01702 are separated by 20 nucleotides MPMX26_01699: MPMX26_01699 - 3-oxoadipate CoA-transferase subunit A, at 1,754,026 to 1,754,712 _01699 MPMX26_01700: MPMX26_01700 - 3-oxoadipate CoA-transferase subunit B, at 1,754,731 to 1,755,384 _01700 MPMX26_01701: MPMX26_01701 - Beta-ketoadipyl-CoA thiolase, at 1,755,430 to 1,756,635 _01701 MPMX26_01702: MPMX26_01702 - 3-oxoadipate enol-lactonase 2, at 1,756,656 to 1,757,432 _01702 Position (kb) 1755 1756 1757Strain fitness (log2 ratio) -1 0 1at 1755.301 kb on - strand, within MPMX26_01700at 1756.335 kb on - strand, within MPMX26_01701

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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1,755,301 - MPMX26_01700 0.87 -1.2
1,756,335 - MPMX26_01701 0.75 -0.6

Or see this region's nucleotide sequence