Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01679

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01677 and MPMX26_01678 are separated by 183 nucleotidesMPMX26_01678 and MPMX26_01679 overlap by 38 nucleotidesMPMX26_01679 and MPMX26_01680 are separated by 6 nucleotides MPMX26_01677: MPMX26_01677 - putative cysteine-rich protein YhjQ, at 1,733,229 to 1,733,600 _01677 MPMX26_01678: MPMX26_01678 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,733,784 to 1,734,515 _01678 MPMX26_01679: MPMX26_01679 - Cell division protein FtsB, at 1,734,478 to 1,734,879 _01679 MPMX26_01680: MPMX26_01680 - Enolase, at 1,734,886 to 1,736,175 _01680 Position (kb) 1734 1735Strain fitness (log2 ratio) -1 0 1at 1734.556 kb on - strand, within MPMX26_01679at 1734.565 kb on - strand, within MPMX26_01679at 1734.565 kb on - strand, within MPMX26_01679at 1734.586 kb on - strand, within MPMX26_01679at 1734.586 kb on - strand, within MPMX26_01679

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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1,734,556 - MPMX26_01679 0.19 -0.0
1,734,565 - MPMX26_01679 0.22 +0.6
1,734,565 - MPMX26_01679 0.22 +0.3
1,734,586 - MPMX26_01679 0.27 +0.3
1,734,586 - MPMX26_01679 0.27 +0.3

Or see this region's nucleotide sequence