Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01675

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01673 and MPMX26_01674 are separated by 52 nucleotidesMPMX26_01674 and MPMX26_01675 overlap by 13 nucleotidesMPMX26_01675 and MPMX26_01676 are separated by 98 nucleotidesMPMX26_01676 and MPMX26_01677 are separated by 76 nucleotides MPMX26_01673: MPMX26_01673 - Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive, at 1,730,250 to 1,731,341 _01673 MPMX26_01674: MPMX26_01674 - hypothetical protein, at 1,731,394 to 1,731,918 _01674 MPMX26_01675: MPMX26_01675 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 1,731,906 to 1,732,400 _01675 MPMX26_01676: MPMX26_01676 - hypothetical protein, at 1,732,499 to 1,733,152 _01676 MPMX26_01677: MPMX26_01677 - putative cysteine-rich protein YhjQ, at 1,733,229 to 1,733,600 _01677 Position (kb) 1731 1732 1733Strain fitness (log2 ratio) -1 0 1at 1730.927 kb on + strand, within MPMX26_01673at 1730.949 kb on + strand, within MPMX26_01673at 1730.965 kb on + strand, within MPMX26_01673at 1730.965 kb on + strand, within MPMX26_01673at 1730.967 kb on + strand, within MPMX26_01673at 1730.999 kb on + strand, within MPMX26_01673at 1731.005 kb on + strand, within MPMX26_01673at 1731.005 kb on + strand, within MPMX26_01673at 1731.155 kb on + strand, within MPMX26_01673at 1731.172 kb on + strand, within MPMX26_01673at 1731.179 kb on + strand, within MPMX26_01673at 1731.180 kb on + strand, within MPMX26_01673at 1731.180 kb on + strand, within MPMX26_01673at 1731.191 kb on + strand, within MPMX26_01673at 1731.191 kb on + strand, within MPMX26_01673at 1731.191 kb on + strand, within MPMX26_01673at 1731.197 kb on + strand, within MPMX26_01673at 1731.232 kb on + strandat 1731.232 kb on + strandat 1731.232 kb on + strandat 1731.232 kb on + strandat 1731.233 kb on + strandat 1731.237 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.262 kb on + strandat 1731.265 kb on + strandat 1731.456 kb on + strand, within MPMX26_01674at 1731.456 kb on + strand, within MPMX26_01674at 1731.466 kb on + strand, within MPMX26_01674at 1731.466 kb on + strand, within MPMX26_01674at 1731.589 kb on + strand, within MPMX26_01674at 1731.610 kb on + strand, within MPMX26_01674at 1731.778 kb on + strand, within MPMX26_01674at 1731.831 kb on + strand, within MPMX26_01674at 1732.597 kb on + strand, within MPMX26_01676at 1732.597 kb on + strand, within MPMX26_01676at 1732.597 kb on + strand, within MPMX26_01676at 1732.597 kb on + strand, within MPMX26_01676at 1732.709 kb on + strand, within MPMX26_01676at 1732.765 kb on + strand, within MPMX26_01676at 1732.765 kb on + strand, within MPMX26_01676at 1732.765 kb on + strand, within MPMX26_01676at 1732.765 kb on + strand, within MPMX26_01676at 1732.765 kb on + strand, within MPMX26_01676at 1732.765 kb on + strand, within MPMX26_01676at 1732.804 kb on + strand, within MPMX26_01676at 1732.949 kb on + strand, within MPMX26_01676at 1733.045 kb on + strand, within MPMX26_01676at 1733.045 kb on + strand, within MPMX26_01676at 1733.081 kb on + strand, within MPMX26_01676at 1733.081 kb on + strand, within MPMX26_01676at 1733.290 kb on - strand, within MPMX26_01677

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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1,730,927 + MPMX26_01673 0.62 +0.0
1,730,949 + MPMX26_01673 0.64 +0.4
1,730,965 + MPMX26_01673 0.65 -0.5
1,730,965 + MPMX26_01673 0.65 +0.7
1,730,967 + MPMX26_01673 0.66 -0.2
1,730,999 + MPMX26_01673 0.69 +0.1
1,731,005 + MPMX26_01673 0.69 +0.1
1,731,005 + MPMX26_01673 0.69 +0.2
1,731,155 + MPMX26_01673 0.83 +0.1
1,731,172 + MPMX26_01673 0.84 -0.9
1,731,179 + MPMX26_01673 0.85 +0.3
1,731,180 + MPMX26_01673 0.85 +0.5
1,731,180 + MPMX26_01673 0.85 +0.2
1,731,191 + MPMX26_01673 0.86 +0.5
1,731,191 + MPMX26_01673 0.86 +0.1
1,731,191 + MPMX26_01673 0.86 +0.2
1,731,197 + MPMX26_01673 0.87 +0.5
1,731,232 + -0.0
1,731,232 + -0.1
1,731,232 + -0.3
1,731,232 + +0.1
1,731,233 + +0.3
1,731,237 + +0.1
1,731,262 + -0.9
1,731,262 + -0.1
1,731,262 + +0.0
1,731,262 + +0.4
1,731,262 + +0.2
1,731,262 + +1.4
1,731,262 + -0.1
1,731,262 + +0.7
1,731,265 + +0.3
1,731,456 + MPMX26_01674 0.12 -0.4
1,731,456 + MPMX26_01674 0.12 +0.0
1,731,466 + MPMX26_01674 0.14 +0.0
1,731,466 + MPMX26_01674 0.14 +0.2
1,731,589 + MPMX26_01674 0.37 -0.3
1,731,610 + MPMX26_01674 0.41 +0.4
1,731,778 + MPMX26_01674 0.73 -0.4
1,731,831 + MPMX26_01674 0.83 -0.5
1,732,597 + MPMX26_01676 0.15 +0.2
1,732,597 + MPMX26_01676 0.15 +1.3
1,732,597 + MPMX26_01676 0.15 +0.5
1,732,597 + MPMX26_01676 0.15 +0.7
1,732,709 + MPMX26_01676 0.32 +0.2
1,732,765 + MPMX26_01676 0.41 +0.8
1,732,765 + MPMX26_01676 0.41 +0.5
1,732,765 + MPMX26_01676 0.41 +1.3
1,732,765 + MPMX26_01676 0.41 -0.2
1,732,765 + MPMX26_01676 0.41 -0.9
1,732,765 + MPMX26_01676 0.41 +0.5
1,732,804 + MPMX26_01676 0.47 +1.3
1,732,949 + MPMX26_01676 0.69 +0.8
1,733,045 + MPMX26_01676 0.83 +0.6
1,733,045 + MPMX26_01676 0.83 +0.4
1,733,081 + MPMX26_01676 0.89 +1.3
1,733,081 + MPMX26_01676 0.89 +0.1
1,733,290 - MPMX26_01677 0.16 -0.8

Or see this region's nucleotide sequence