Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01579

Experiment: Ammonium Nitrate (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01577 and MPMX26_01578 are separated by 122 nucleotidesMPMX26_01578 and MPMX26_01579 are separated by 376 nucleotidesMPMX26_01579 and MPMX26_01580 are separated by 102 nucleotides MPMX26_01577: MPMX26_01577 - Bicarbonate transport ATP-binding protein CmpC, at 1,635,957 to 1,636,952 _01577 MPMX26_01578: MPMX26_01578 - hypothetical protein, at 1,637,075 to 1,637,512 _01578 MPMX26_01579: MPMX26_01579 - Porin B, at 1,637,889 to 1,639,133 _01579 MPMX26_01580: MPMX26_01580 - Quinoprotein glucose dehydrogenase, at 1,639,236 to 1,641,629 _01580 Position (kb) 1637 1638 1639 1640Strain fitness (log2 ratio) -1 0 1at 1637.930 kb on + strandat 1637.960 kb on + strandat 1637.994 kb on + strandat 1637.994 kb on + strandat 1637.999 kb on + strandat 1638.039 kb on + strand, within MPMX26_01579at 1638.062 kb on + strand, within MPMX26_01579at 1638.062 kb on + strand, within MPMX26_01579at 1638.062 kb on + strand, within MPMX26_01579at 1638.062 kb on + strand, within MPMX26_01579at 1638.062 kb on + strand, within MPMX26_01579at 1638.062 kb on + strand, within MPMX26_01579at 1638.113 kb on + strand, within MPMX26_01579at 1638.113 kb on + strand, within MPMX26_01579at 1638.120 kb on + strand, within MPMX26_01579at 1638.120 kb on + strand, within MPMX26_01579at 1638.185 kb on + strand, within MPMX26_01579at 1638.218 kb on + strand, within MPMX26_01579at 1638.241 kb on + strand, within MPMX26_01579at 1638.243 kb on + strand, within MPMX26_01579at 1638.243 kb on + strand, within MPMX26_01579at 1638.243 kb on + strand, within MPMX26_01579at 1638.263 kb on + strand, within MPMX26_01579at 1638.282 kb on + strand, within MPMX26_01579at 1638.282 kb on + strand, within MPMX26_01579at 1638.282 kb on + strand, within MPMX26_01579at 1638.284 kb on + strand, within MPMX26_01579at 1638.305 kb on + strand, within MPMX26_01579at 1638.466 kb on + strand, within MPMX26_01579at 1638.541 kb on + strand, within MPMX26_01579at 1638.549 kb on + strand, within MPMX26_01579at 1638.551 kb on + strand, within MPMX26_01579at 1638.582 kb on + strand, within MPMX26_01579at 1638.644 kb on + strand, within MPMX26_01579at 1638.672 kb on + strand, within MPMX26_01579at 1638.672 kb on + strand, within MPMX26_01579at 1638.750 kb on + strand, within MPMX26_01579at 1638.782 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.788 kb on + strand, within MPMX26_01579at 1638.798 kb on + strand, within MPMX26_01579at 1638.828 kb on + strand, within MPMX26_01579at 1638.861 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.887 kb on + strand, within MPMX26_01579at 1638.897 kb on + strand, within MPMX26_01579at 1638.897 kb on + strand, within MPMX26_01579at 1638.913 kb on + strand, within MPMX26_01579at 1638.916 kb on + strand, within MPMX26_01579at 1638.926 kb on + strand, within MPMX26_01579at 1638.931 kb on + strand, within MPMX26_01579at 1638.958 kb on + strand, within MPMX26_01579at 1638.965 kb on + strand, within MPMX26_01579at 1638.965 kb on + strand, within MPMX26_01579at 1638.965 kb on + strand, within MPMX26_01579at 1638.965 kb on + strand, within MPMX26_01579at 1638.965 kb on + strand, within MPMX26_01579at 1638.966 kb on + strand, within MPMX26_01579at 1638.966 kb on + strand, within MPMX26_01579at 1638.966 kb on + strand, within MPMX26_01579at 1638.966 kb on + strand, within MPMX26_01579at 1639.030 kb on + strandat 1639.030 kb on + strandat 1639.030 kb on + strandat 1639.074 kb on + strandat 1639.149 kb on + strandat 1639.162 kb on + strandat 1639.167 kb on + strandat 1639.172 kb on + strandat 1639.172 kb on + strandat 1639.177 kb on + strandat 1639.177 kb on + strandat 1639.313 kb on + strandat 1639.313 kb on + strandat 1639.379 kb on + strandat 1639.389 kb on + strandat 1639.419 kb on + strandat 1639.427 kb on + strandat 1639.445 kb on + strandat 1639.445 kb on + strandat 1639.495 kb on + strand, within MPMX26_01580at 1639.506 kb on + strand, within MPMX26_01580at 1639.506 kb on + strand, within MPMX26_01580at 1639.506 kb on + strand, within MPMX26_01580at 1639.506 kb on + strand, within MPMX26_01580at 1639.515 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.605 kb on + strand, within MPMX26_01580at 1639.673 kb on + strand, within MPMX26_01580at 1639.673 kb on + strand, within MPMX26_01580at 1639.673 kb on + strand, within MPMX26_01580at 1639.692 kb on + strand, within MPMX26_01580at 1639.692 kb on + strand, within MPMX26_01580at 1639.692 kb on + strand, within MPMX26_01580at 1639.692 kb on + strand, within MPMX26_01580at 1639.692 kb on + strand, within MPMX26_01580at 1639.692 kb on + strand, within MPMX26_01580at 1639.713 kb on + strand, within MPMX26_01580at 1639.713 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.722 kb on + strand, within MPMX26_01580at 1639.725 kb on + strand, within MPMX26_01580at 1639.732 kb on + strand, within MPMX26_01580at 1639.737 kb on + strand, within MPMX26_01580at 1639.737 kb on + strand, within MPMX26_01580at 1639.758 kb on + strand, within MPMX26_01580at 1639.779 kb on + strand, within MPMX26_01580at 1639.784 kb on + strand, within MPMX26_01580at 1639.784 kb on + strand, within MPMX26_01580at 1639.827 kb on + strand, within MPMX26_01580at 1639.841 kb on + strand, within MPMX26_01580at 1639.841 kb on + strand, within MPMX26_01580at 1639.931 kb on + strand, within MPMX26_01580at 1639.952 kb on + strand, within MPMX26_01580at 1639.952 kb on + strand, within MPMX26_01580at 1640.012 kb on + strand, within MPMX26_01580at 1640.013 kb on + strand, within MPMX26_01580at 1640.043 kb on + strand, within MPMX26_01580at 1640.043 kb on + strand, within MPMX26_01580at 1640.048 kb on + strand, within MPMX26_01580at 1640.048 kb on + strand, within MPMX26_01580at 1640.048 kb on + strand, within MPMX26_01580at 1640.048 kb on + strand, within MPMX26_01580at 1640.076 kb on + strand, within MPMX26_01580at 1640.076 kb on + strand, within MPMX26_01580at 1640.088 kb on + strand, within MPMX26_01580at 1640.088 kb on + strand, within MPMX26_01580at 1640.120 kb on + strand, within MPMX26_01580

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
remove
1,637,930 + +0.2
1,637,960 + -0.2
1,637,994 + -0.2
1,637,994 + -0.1
1,637,999 + +0.3
1,638,039 + MPMX26_01579 0.12 -1.5
1,638,062 + MPMX26_01579 0.14 -0.2
1,638,062 + MPMX26_01579 0.14 +0.1
1,638,062 + MPMX26_01579 0.14 +0.4
1,638,062 + MPMX26_01579 0.14 -0.2
1,638,062 + MPMX26_01579 0.14 +0.3
1,638,062 + MPMX26_01579 0.14 +0.4
1,638,113 + MPMX26_01579 0.18 +0.1
1,638,113 + MPMX26_01579 0.18 +0.6
1,638,120 + MPMX26_01579 0.19 +0.1
1,638,120 + MPMX26_01579 0.19 +0.6
1,638,185 + MPMX26_01579 0.24 +0.2
1,638,218 + MPMX26_01579 0.26 -0.1
1,638,241 + MPMX26_01579 0.28 -1.0
1,638,243 + MPMX26_01579 0.28 +0.2
1,638,243 + MPMX26_01579 0.28 -1.5
1,638,243 + MPMX26_01579 0.28 +0.2
1,638,263 + MPMX26_01579 0.30 +0.6
1,638,282 + MPMX26_01579 0.32 +0.6
1,638,282 + MPMX26_01579 0.32 +0.6
1,638,282 + MPMX26_01579 0.32 +0.0
1,638,284 + MPMX26_01579 0.32 +0.7
1,638,305 + MPMX26_01579 0.33 -0.1
1,638,466 + MPMX26_01579 0.46 +1.0
1,638,541 + MPMX26_01579 0.52 -0.2
1,638,549 + MPMX26_01579 0.53 +0.2
1,638,551 + MPMX26_01579 0.53 +0.4
1,638,582 + MPMX26_01579 0.56 +0.6
1,638,644 + MPMX26_01579 0.61 +0.1
1,638,672 + MPMX26_01579 0.63 +0.2
1,638,672 + MPMX26_01579 0.63 +0.1
1,638,750 + MPMX26_01579 0.69 +0.2
1,638,782 + MPMX26_01579 0.72 +0.4
1,638,788 + MPMX26_01579 0.72 +0.5
1,638,788 + MPMX26_01579 0.72 +0.2
1,638,788 + MPMX26_01579 0.72 +0.0
1,638,788 + MPMX26_01579 0.72 +0.1
1,638,788 + MPMX26_01579 0.72 -0.1
1,638,788 + MPMX26_01579 0.72 +0.1
1,638,788 + MPMX26_01579 0.72 +0.0
1,638,788 + MPMX26_01579 0.72 +0.1
1,638,788 + MPMX26_01579 0.72 +0.2
1,638,788 + MPMX26_01579 0.72 +0.3
1,638,798 + MPMX26_01579 0.73 +0.4
1,638,828 + MPMX26_01579 0.75 -0.2
1,638,861 + MPMX26_01579 0.78 -0.3
1,638,887 + MPMX26_01579 0.80 +0.4
1,638,887 + MPMX26_01579 0.80 +1.5
1,638,887 + MPMX26_01579 0.80 -0.6
1,638,887 + MPMX26_01579 0.80 +1.0
1,638,887 + MPMX26_01579 0.80 +0.1
1,638,887 + MPMX26_01579 0.80 +0.2
1,638,887 + MPMX26_01579 0.80 +0.1
1,638,887 + MPMX26_01579 0.80 -0.5
1,638,887 + MPMX26_01579 0.80 -0.1
1,638,887 + MPMX26_01579 0.80 -0.2
1,638,887 + MPMX26_01579 0.80 -0.0
1,638,887 + MPMX26_01579 0.80 +0.3
1,638,887 + MPMX26_01579 0.80 -0.2
1,638,887 + MPMX26_01579 0.80 +0.3
1,638,887 + MPMX26_01579 0.80 -1.1
1,638,887 + MPMX26_01579 0.80 +0.6
1,638,887 + MPMX26_01579 0.80 +0.6
1,638,887 + MPMX26_01579 0.80 -0.4
1,638,887 + MPMX26_01579 0.80 +0.0
1,638,887 + MPMX26_01579 0.80 -0.2
1,638,887 + MPMX26_01579 0.80 -0.2
1,638,887 + MPMX26_01579 0.80 -0.5
1,638,887 + MPMX26_01579 0.80 -0.4
1,638,897 + MPMX26_01579 0.81 -0.0
1,638,897 + MPMX26_01579 0.81 +0.4
1,638,913 + MPMX26_01579 0.82 +1.1
1,638,916 + MPMX26_01579 0.82 +0.8
1,638,926 + MPMX26_01579 0.83 +0.2
1,638,931 + MPMX26_01579 0.84 -0.5
1,638,958 + MPMX26_01579 0.86 +1.3
1,638,965 + MPMX26_01579 0.86 +0.1
1,638,965 + MPMX26_01579 0.86 -0.4
1,638,965 + MPMX26_01579 0.86 -0.4
1,638,965 + MPMX26_01579 0.86 +0.5
1,638,965 + MPMX26_01579 0.86 -0.1
1,638,966 + MPMX26_01579 0.87 +0.4
1,638,966 + MPMX26_01579 0.87 +0.4
1,638,966 + MPMX26_01579 0.87 -0.1
1,638,966 + MPMX26_01579 0.87 +0.9
1,639,030 + +0.1
1,639,030 + -0.0
1,639,030 + +0.1
1,639,074 + +0.0
1,639,149 + -0.0
1,639,162 + +0.7
1,639,167 + +0.8
1,639,172 + -0.3
1,639,172 + +0.3
1,639,177 + -0.1
1,639,177 + +0.1
1,639,313 + +0.1
1,639,313 + -0.5
1,639,379 + -0.5
1,639,389 + +0.1
1,639,419 + -0.2
1,639,427 + +0.2
1,639,445 + +0.1
1,639,445 + +0.4
1,639,495 + MPMX26_01580 0.11 -0.5
1,639,506 + MPMX26_01580 0.11 +0.2
1,639,506 + MPMX26_01580 0.11 +0.0
1,639,506 + MPMX26_01580 0.11 +0.4
1,639,506 + MPMX26_01580 0.11 +0.4
1,639,515 + MPMX26_01580 0.12 -1.7
1,639,605 + MPMX26_01580 0.15 -0.1
1,639,605 + MPMX26_01580 0.15 -0.2
1,639,605 + MPMX26_01580 0.15 +0.2
1,639,605 + MPMX26_01580 0.15 +0.3
1,639,605 + MPMX26_01580 0.15 +0.1
1,639,605 + MPMX26_01580 0.15 -0.0
1,639,605 + MPMX26_01580 0.15 -1.0
1,639,605 + MPMX26_01580 0.15 +0.4
1,639,605 + MPMX26_01580 0.15 +0.1
1,639,605 + MPMX26_01580 0.15 -0.6
1,639,605 + MPMX26_01580 0.15 +1.0
1,639,605 + MPMX26_01580 0.15 +0.4
1,639,605 + MPMX26_01580 0.15 -0.3
1,639,605 + MPMX26_01580 0.15 -0.2
1,639,605 + MPMX26_01580 0.15 -0.0
1,639,673 + MPMX26_01580 0.18 +0.1
1,639,673 + MPMX26_01580 0.18 +0.2
1,639,673 + MPMX26_01580 0.18 -0.1
1,639,692 + MPMX26_01580 0.19 -0.1
1,639,692 + MPMX26_01580 0.19 +0.5
1,639,692 + MPMX26_01580 0.19 -0.0
1,639,692 + MPMX26_01580 0.19 -0.6
1,639,692 + MPMX26_01580 0.19 -0.4
1,639,692 + MPMX26_01580 0.19 +0.7
1,639,713 + MPMX26_01580 0.20 +0.5
1,639,713 + MPMX26_01580 0.20 +0.0
1,639,722 + MPMX26_01580 0.20 +0.1
1,639,722 + MPMX26_01580 0.20 +0.2
1,639,722 + MPMX26_01580 0.20 -0.1
1,639,722 + MPMX26_01580 0.20 +0.3
1,639,722 + MPMX26_01580 0.20 -0.1
1,639,722 + MPMX26_01580 0.20 +0.1
1,639,722 + MPMX26_01580 0.20 +0.2
1,639,725 + MPMX26_01580 0.20 -0.1
1,639,732 + MPMX26_01580 0.21 -0.7
1,639,737 + MPMX26_01580 0.21 +0.1
1,639,737 + MPMX26_01580 0.21 -0.2
1,639,758 + MPMX26_01580 0.22 +0.4
1,639,779 + MPMX26_01580 0.23 +0.1
1,639,784 + MPMX26_01580 0.23 +0.3
1,639,784 + MPMX26_01580 0.23 +0.3
1,639,827 + MPMX26_01580 0.25 +0.0
1,639,841 + MPMX26_01580 0.25 +0.6
1,639,841 + MPMX26_01580 0.25 +0.1
1,639,931 + MPMX26_01580 0.29 +0.8
1,639,952 + MPMX26_01580 0.30 -0.4
1,639,952 + MPMX26_01580 0.30 +0.1
1,640,012 + MPMX26_01580 0.32 -0.2
1,640,013 + MPMX26_01580 0.32 +0.1
1,640,043 + MPMX26_01580 0.34 +0.8
1,640,043 + MPMX26_01580 0.34 -0.1
1,640,048 + MPMX26_01580 0.34 -0.0
1,640,048 + MPMX26_01580 0.34 +0.1
1,640,048 + MPMX26_01580 0.34 +0.3
1,640,048 + MPMX26_01580 0.34 -0.4
1,640,076 + MPMX26_01580 0.35 +0.2
1,640,076 + MPMX26_01580 0.35 -0.1
1,640,088 + MPMX26_01580 0.36 +0.4
1,640,088 + MPMX26_01580 0.36 +0.2
1,640,120 + MPMX26_01580 0.37 -0.0

Or see this region's nucleotide sequence