Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00998

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00997 and MPMX26_00998 are separated by 170 nucleotidesMPMX26_00998 and MPMX26_00999 are separated by 52 nucleotides MPMX26_00997: MPMX26_00997 - GTP cyclohydrolase 1 type 2, at 1,046,389 to 1,047,147 _00997 MPMX26_00998: MPMX26_00998 - Serine endoprotease DegS, at 1,047,318 to 1,048,499 _00998 MPMX26_00999: MPMX26_00999 - Multifunctional CCA protein, at 1,048,552 to 1,049,799 _00999 Position (kb) 1047 1048 1049Strain fitness (log2 ratio) -2 -1 0 1at 1046.466 kb on - strand, within MPMX26_00997at 1046.466 kb on - strand, within MPMX26_00997at 1046.476 kb on - strand, within MPMX26_00997at 1046.476 kb on - strand, within MPMX26_00997at 1046.476 kb on - strand, within MPMX26_00997at 1046.476 kb on - strand, within MPMX26_00997at 1046.476 kb on - strand, within MPMX26_00997at 1046.488 kb on - strand, within MPMX26_00997at 1046.511 kb on - strand, within MPMX26_00997at 1046.526 kb on - strand, within MPMX26_00997at 1046.552 kb on - strand, within MPMX26_00997at 1046.578 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.583 kb on - strand, within MPMX26_00997at 1046.610 kb on - strand, within MPMX26_00997at 1046.665 kb on - strand, within MPMX26_00997at 1046.677 kb on - strand, within MPMX26_00997at 1046.677 kb on - strand, within MPMX26_00997at 1046.685 kb on - strand, within MPMX26_00997at 1046.717 kb on - strand, within MPMX26_00997at 1046.749 kb on - strand, within MPMX26_00997at 1046.749 kb on - strand, within MPMX26_00997at 1046.751 kb on - strand, within MPMX26_00997at 1046.785 kb on - strand, within MPMX26_00997at 1046.827 kb on - strand, within MPMX26_00997at 1046.857 kb on - strand, within MPMX26_00997at 1046.881 kb on - strand, within MPMX26_00997at 1046.937 kb on - strand, within MPMX26_00997at 1047.150 kb on - strandat 1047.321 kb on + strandat 1047.351 kb on + strandat 1047.351 kb on + strandat 1047.493 kb on + strand, within MPMX26_00998at 1047.530 kb on + strand, within MPMX26_00998at 1047.614 kb on + strand, within MPMX26_00998at 1047.644 kb on + strand, within MPMX26_00998at 1047.661 kb on + strand, within MPMX26_00998at 1047.661 kb on + strand, within MPMX26_00998at 1047.684 kb on + strand, within MPMX26_00998at 1047.684 kb on + strand, within MPMX26_00998at 1047.684 kb on + strand, within MPMX26_00998at 1047.687 kb on + strand, within MPMX26_00998at 1047.693 kb on + strand, within MPMX26_00998at 1047.786 kb on + strand, within MPMX26_00998at 1047.786 kb on + strand, within MPMX26_00998at 1047.814 kb on + strand, within MPMX26_00998at 1047.824 kb on + strand, within MPMX26_00998at 1047.837 kb on + strand, within MPMX26_00998at 1047.837 kb on + strand, within MPMX26_00998at 1047.878 kb on + strand, within MPMX26_00998at 1047.899 kb on + strand, within MPMX26_00998at 1047.899 kb on + strand, within MPMX26_00998at 1047.899 kb on + strand, within MPMX26_00998at 1047.909 kb on + strand, within MPMX26_00998at 1047.916 kb on + strand, within MPMX26_00998at 1048.082 kb on + strand, within MPMX26_00998at 1048.166 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.196 kb on + strand, within MPMX26_00998at 1048.213 kb on + strand, within MPMX26_00998at 1048.229 kb on + strand, within MPMX26_00998at 1048.257 kb on + strand, within MPMX26_00998at 1048.257 kb on + strand, within MPMX26_00998at 1048.257 kb on + strand, within MPMX26_00998at 1048.259 kb on + strand, within MPMX26_00998at 1048.262 kb on + strand, within MPMX26_00998at 1048.262 kb on + strand, within MPMX26_00998at 1048.288 kb on + strand, within MPMX26_00998at 1048.296 kb on + strand, within MPMX26_00998at 1048.331 kb on + strand, within MPMX26_00998at 1048.374 kb on + strand, within MPMX26_00998at 1048.374 kb on + strand, within MPMX26_00998at 1048.374 kb on + strand, within MPMX26_00998at 1048.379 kb on + strand, within MPMX26_00998at 1048.384 kb on + strandat 1048.384 kb on + strandat 1048.384 kb on + strandat 1048.432 kb on + strandat 1048.438 kb on + strandat 1048.438 kb on + strandat 1048.455 kb on + strandat 1048.597 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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1,046,466 - MPMX26_00997 0.10 -0.3
1,046,466 - MPMX26_00997 0.10 +0.0
1,046,476 - MPMX26_00997 0.11 -0.6
1,046,476 - MPMX26_00997 0.11 -0.4
1,046,476 - MPMX26_00997 0.11 +0.1
1,046,476 - MPMX26_00997 0.11 -0.2
1,046,476 - MPMX26_00997 0.11 +0.4
1,046,488 - MPMX26_00997 0.13 +0.4
1,046,511 - MPMX26_00997 0.16 +0.2
1,046,526 - MPMX26_00997 0.18 +0.2
1,046,552 - MPMX26_00997 0.21 -0.5
1,046,578 - MPMX26_00997 0.25 -0.3
1,046,583 - MPMX26_00997 0.26 +0.2
1,046,583 - MPMX26_00997 0.26 +0.2
1,046,583 - MPMX26_00997 0.26 +0.2
1,046,583 - MPMX26_00997 0.26 -0.0
1,046,583 - MPMX26_00997 0.26 -0.2
1,046,583 - MPMX26_00997 0.26 +0.3
1,046,583 - MPMX26_00997 0.26 -0.2
1,046,583 - MPMX26_00997 0.26 +0.2
1,046,583 - MPMX26_00997 0.26 -1.1
1,046,583 - MPMX26_00997 0.26 +0.5
1,046,583 - MPMX26_00997 0.26 -0.1
1,046,583 - MPMX26_00997 0.26 -0.6
1,046,583 - MPMX26_00997 0.26 +0.7
1,046,583 - MPMX26_00997 0.26 +0.4
1,046,583 - MPMX26_00997 0.26 -1.1
1,046,610 - MPMX26_00997 0.29 +0.5
1,046,665 - MPMX26_00997 0.36 +0.2
1,046,677 - MPMX26_00997 0.38 -0.1
1,046,677 - MPMX26_00997 0.38 -0.1
1,046,685 - MPMX26_00997 0.39 +0.2
1,046,717 - MPMX26_00997 0.43 +0.4
1,046,749 - MPMX26_00997 0.47 +0.4
1,046,749 - MPMX26_00997 0.47 -0.1
1,046,751 - MPMX26_00997 0.48 +0.1
1,046,785 - MPMX26_00997 0.52 -0.3
1,046,827 - MPMX26_00997 0.58 +0.2
1,046,857 - MPMX26_00997 0.62 -2.4
1,046,881 - MPMX26_00997 0.65 -0.2
1,046,937 - MPMX26_00997 0.72 +0.4
1,047,150 - +0.3
1,047,321 + +0.2
1,047,351 + -0.0
1,047,351 + -0.1
1,047,493 + MPMX26_00998 0.15 -0.1
1,047,530 + MPMX26_00998 0.18 +0.1
1,047,614 + MPMX26_00998 0.25 -0.3
1,047,644 + MPMX26_00998 0.28 -0.2
1,047,661 + MPMX26_00998 0.29 +1.3
1,047,661 + MPMX26_00998 0.29 +0.0
1,047,684 + MPMX26_00998 0.31 +0.2
1,047,684 + MPMX26_00998 0.31 -0.0
1,047,684 + MPMX26_00998 0.31 -0.2
1,047,687 + MPMX26_00998 0.31 +0.6
1,047,693 + MPMX26_00998 0.32 -0.1
1,047,786 + MPMX26_00998 0.40 +0.2
1,047,786 + MPMX26_00998 0.40 -0.2
1,047,814 + MPMX26_00998 0.42 -1.2
1,047,824 + MPMX26_00998 0.43 +0.2
1,047,837 + MPMX26_00998 0.44 +0.1
1,047,837 + MPMX26_00998 0.44 -0.2
1,047,878 + MPMX26_00998 0.47 +0.2
1,047,899 + MPMX26_00998 0.49 +0.6
1,047,899 + MPMX26_00998 0.49 -0.3
1,047,899 + MPMX26_00998 0.49 +0.1
1,047,909 + MPMX26_00998 0.50 +0.2
1,047,916 + MPMX26_00998 0.51 +0.8
1,048,082 + MPMX26_00998 0.65 -0.9
1,048,166 + MPMX26_00998 0.72 -0.0
1,048,196 + MPMX26_00998 0.74 -0.0
1,048,196 + MPMX26_00998 0.74 -1.1
1,048,196 + MPMX26_00998 0.74 -0.6
1,048,196 + MPMX26_00998 0.74 -0.5
1,048,196 + MPMX26_00998 0.74 +0.1
1,048,196 + MPMX26_00998 0.74 -0.2
1,048,196 + MPMX26_00998 0.74 +0.4
1,048,213 + MPMX26_00998 0.76 +0.6
1,048,229 + MPMX26_00998 0.77 -0.6
1,048,257 + MPMX26_00998 0.79 -0.4
1,048,257 + MPMX26_00998 0.79 +0.3
1,048,257 + MPMX26_00998 0.79 -0.3
1,048,259 + MPMX26_00998 0.80 -0.1
1,048,262 + MPMX26_00998 0.80 +0.2
1,048,262 + MPMX26_00998 0.80 -0.0
1,048,288 + MPMX26_00998 0.82 +1.2
1,048,296 + MPMX26_00998 0.83 +0.6
1,048,331 + MPMX26_00998 0.86 -0.3
1,048,374 + MPMX26_00998 0.89 -0.2
1,048,374 + MPMX26_00998 0.89 +0.2
1,048,374 + MPMX26_00998 0.89 +0.1
1,048,379 + MPMX26_00998 0.90 +0.3
1,048,384 + +0.1
1,048,384 + -0.2
1,048,384 + +0.8
1,048,432 + -0.3
1,048,438 + +0.5
1,048,438 + -0.3
1,048,455 + +0.1
1,048,597 - +0.1

Or see this region's nucleotide sequence