Experiment: Ammonium Nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00979 and MPMX26_00980 are separated by 122 nucleotides MPMX26_00980 and MPMX26_00981 are separated by 69 nucleotides MPMX26_00981 and MPMX26_00982 are separated by 85 nucleotides
MPMX26_00979: MPMX26_00979 - hypothetical protein, at 1,031,429 to 1,033,315
_00979
MPMX26_00980: MPMX26_00980 - Diguanylate cyclase DosC, at 1,033,438 to 1,034,796
_00980
MPMX26_00981: MPMX26_00981 - GTP cyclohydrolase 1, at 1,034,866 to 1,035,420
_00981
MPMX26_00982: MPMX26_00982 - Endonuclease MutS2, at 1,035,506 to 1,036,195
_00982
Position (kb)
1033
1034
1035 Strain fitness (log2 ratio)
-2
-1
0
1 at 1033.295 kb on + strand at 1033.444 kb on + strand at 1033.512 kb on + strand at 1033.621 kb on + strand, within MPMX26_00980 at 1033.732 kb on + strand, within MPMX26_00980 at 1033.858 kb on + strand, within MPMX26_00980 at 1033.885 kb on + strand, within MPMX26_00980 at 1033.992 kb on + strand, within MPMX26_00980 at 1033.992 kb on + strand, within MPMX26_00980 at 1034.191 kb on + strand, within MPMX26_00980 at 1034.205 kb on + strand, within MPMX26_00980 at 1034.401 kb on + strand, within MPMX26_00980 at 1034.401 kb on + strand, within MPMX26_00980 at 1034.515 kb on + strand, within MPMX26_00980 at 1034.581 kb on + strand, within MPMX26_00980 at 1034.593 kb on + strand, within MPMX26_00980 at 1034.646 kb on + strand, within MPMX26_00980 at 1034.646 kb on + strand, within MPMX26_00980 at 1034.677 kb on + strand at 1034.770 kb on + strand at 1034.782 kb on + strand at 1034.881 kb on - strand at 1035.465 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.545 kb on - strand at 1035.547 kb on - strand at 1035.556 kb on - strand at 1035.556 kb on - strand at 1035.556 kb on - strand at 1035.562 kb on - strand at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.604 kb on - strand, within MPMX26_00982 at 1035.614 kb on - strand, within MPMX26_00982 at 1035.614 kb on - strand, within MPMX26_00982 at 1035.619 kb on - strand, within MPMX26_00982 at 1035.660 kb on - strand, within MPMX26_00982 at 1035.661 kb on - strand, within MPMX26_00982 at 1035.668 kb on - strand, within MPMX26_00982 at 1035.683 kb on - strand, within MPMX26_00982 at 1035.748 kb on - strand, within MPMX26_00982 at 1035.771 kb on - strand, within MPMX26_00982 at 1035.779 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982 at 1035.780 kb on - strand, within MPMX26_00982
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium Nitrate (N) remove 1,033,295 + -0.6 1,033,444 + -0.2 1,033,512 + -0.4 1,033,621 + MPMX26_00980 0.13 -0.1 1,033,732 + MPMX26_00980 0.22 -1.2 1,033,858 + MPMX26_00980 0.31 -1.6 1,033,885 + MPMX26_00980 0.33 +0.8 1,033,992 + MPMX26_00980 0.41 +0.3 1,033,992 + MPMX26_00980 0.41 +1.6 1,034,191 + MPMX26_00980 0.55 +0.1 1,034,205 + MPMX26_00980 0.56 -0.4 1,034,401 + MPMX26_00980 0.71 -1.5 1,034,401 + MPMX26_00980 0.71 +0.2 1,034,515 + MPMX26_00980 0.79 -1.1 1,034,581 + MPMX26_00980 0.84 +0.1 1,034,593 + MPMX26_00980 0.85 -1.0 1,034,646 + MPMX26_00980 0.89 -0.2 1,034,646 + MPMX26_00980 0.89 +0.4 1,034,677 + -0.0 1,034,770 + -0.3 1,034,782 + +0.2 1,034,881 - -1.9 1,035,465 - +0.7 1,035,545 - -0.2 1,035,545 - +0.0 1,035,545 - +0.2 1,035,545 - +0.3 1,035,545 - +0.2 1,035,545 - +0.3 1,035,545 - +0.6 1,035,545 - -0.0 1,035,545 - +0.2 1,035,545 - +0.1 1,035,545 - +1.0 1,035,545 - +0.4 1,035,545 - +0.4 1,035,545 - +0.2 1,035,545 - -0.1 1,035,545 - -0.3 1,035,547 - +0.2 1,035,556 - +0.3 1,035,556 - +0.0 1,035,556 - +0.1 1,035,562 - +0.0 1,035,604 - MPMX26_00982 0.14 +0.1 1,035,604 - MPMX26_00982 0.14 +0.0 1,035,604 - MPMX26_00982 0.14 +0.3 1,035,604 - MPMX26_00982 0.14 +0.1 1,035,604 - MPMX26_00982 0.14 -0.2 1,035,604 - MPMX26_00982 0.14 +0.3 1,035,604 - MPMX26_00982 0.14 +0.5 1,035,604 - MPMX26_00982 0.14 +0.1 1,035,614 - MPMX26_00982 0.16 +0.3 1,035,614 - MPMX26_00982 0.16 -0.2 1,035,619 - MPMX26_00982 0.16 +0.3 1,035,660 - MPMX26_00982 0.22 -0.1 1,035,661 - MPMX26_00982 0.22 -1.1 1,035,668 - MPMX26_00982 0.23 +0.2 1,035,683 - MPMX26_00982 0.26 +0.1 1,035,748 - MPMX26_00982 0.35 +1.2 1,035,771 - MPMX26_00982 0.38 +0.1 1,035,779 - MPMX26_00982 0.40 -0.1 1,035,780 - MPMX26_00982 0.40 +0.2 1,035,780 - MPMX26_00982 0.40 +0.2 1,035,780 - MPMX26_00982 0.40 -0.5 1,035,780 - MPMX26_00982 0.40 +0.3 1,035,780 - MPMX26_00982 0.40 -0.1 1,035,780 - MPMX26_00982 0.40 +0.3 1,035,780 - MPMX26_00982 0.40 +0.1 1,035,780 - MPMX26_00982 0.40 +0.1 1,035,780 - MPMX26_00982 0.40 +0.6 1,035,780 - MPMX26_00982 0.40 +0.3
Or see this region's nucleotide sequence