Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00865

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00863 and MPMX26_00864 are separated by 212 nucleotidesMPMX26_00864 and MPMX26_00865 overlap by 4 nucleotidesMPMX26_00865 and MPMX26_00866 are separated by 328 nucleotides MPMX26_00863: MPMX26_00863 - ISNCY family transposase ISAba32, at 909,604 to 910,386 _00863 MPMX26_00864: MPMX26_00864 - hypothetical protein, at 910,599 to 910,886 _00864 MPMX26_00865: MPMX26_00865 - Transcriptional regulator YqjI, at 910,883 to 911,413 _00865 MPMX26_00866: MPMX26_00866 - Transcriptional regulator AcuR, at 911,742 to 912,386 _00866 Position (kb) 910 911 912Strain fitness (log2 ratio) -1 0 1at 910.311 kb on + strandat 910.698 kb on - strand, within MPMX26_00864at 910.924 kb on - strandat 910.938 kb on - strand, within MPMX26_00865at 910.938 kb on - strand, within MPMX26_00865at 910.980 kb on - strand, within MPMX26_00865at 910.980 kb on - strand, within MPMX26_00865at 911.079 kb on - strand, within MPMX26_00865at 911.130 kb on - strand, within MPMX26_00865at 911.144 kb on - strand, within MPMX26_00865at 911.145 kb on - strand, within MPMX26_00865at 911.145 kb on - strand, within MPMX26_00865at 911.145 kb on - strand, within MPMX26_00865at 911.145 kb on - strand, within MPMX26_00865at 911.145 kb on - strand, within MPMX26_00865at 911.150 kb on - strand, within MPMX26_00865at 911.159 kb on - strand, within MPMX26_00865at 911.215 kb on - strand, within MPMX26_00865at 911.215 kb on - strand, within MPMX26_00865at 911.248 kb on - strand, within MPMX26_00865at 911.253 kb on - strand, within MPMX26_00865at 911.261 kb on - strand, within MPMX26_00865at 911.261 kb on - strand, within MPMX26_00865at 911.261 kb on - strand, within MPMX26_00865at 911.261 kb on - strand, within MPMX26_00865at 911.387 kb on - strandat 911.754 kb on + strandat 911.784 kb on + strandat 911.828 kb on + strand, within MPMX26_00866at 911.828 kb on + strand, within MPMX26_00866at 911.835 kb on + strand, within MPMX26_00866at 911.868 kb on + strand, within MPMX26_00866at 911.888 kb on + strand, within MPMX26_00866at 911.961 kb on + strand, within MPMX26_00866at 911.961 kb on + strand, within MPMX26_00866at 911.971 kb on + strand, within MPMX26_00866at 912.021 kb on + strand, within MPMX26_00866at 912.215 kb on + strand, within MPMX26_00866at 912.225 kb on + strand, within MPMX26_00866at 912.232 kb on + strand, within MPMX26_00866at 912.263 kb on + strand, within MPMX26_00866at 912.273 kb on + strand, within MPMX26_00866at 912.273 kb on + strand, within MPMX26_00866at 912.273 kb on + strand, within MPMX26_00866at 912.283 kb on + strand, within MPMX26_00866at 912.283 kb on + strand, within MPMX26_00866at 912.288 kb on + strand, within MPMX26_00866at 912.288 kb on + strand, within MPMX26_00866at 912.295 kb on + strand, within MPMX26_00866

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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910,311 + +0.2
910,698 - MPMX26_00864 0.34 -0.7
910,924 - -0.0
910,938 - MPMX26_00865 0.10 +0.7
910,938 - MPMX26_00865 0.10 -0.5
910,980 - MPMX26_00865 0.18 +0.5
910,980 - MPMX26_00865 0.18 +0.3
911,079 - MPMX26_00865 0.37 -0.1
911,130 - MPMX26_00865 0.47 -0.2
911,144 - MPMX26_00865 0.49 +0.2
911,145 - MPMX26_00865 0.49 +0.5
911,145 - MPMX26_00865 0.49 -0.1
911,145 - MPMX26_00865 0.49 +0.5
911,145 - MPMX26_00865 0.49 +0.1
911,145 - MPMX26_00865 0.49 -0.1
911,150 - MPMX26_00865 0.50 +0.2
911,159 - MPMX26_00865 0.52 -0.1
911,215 - MPMX26_00865 0.63 -0.4
911,215 - MPMX26_00865 0.63 +0.3
911,248 - MPMX26_00865 0.69 +0.0
911,253 - MPMX26_00865 0.70 +0.3
911,261 - MPMX26_00865 0.71 +0.5
911,261 - MPMX26_00865 0.71 +0.2
911,261 - MPMX26_00865 0.71 -0.1
911,261 - MPMX26_00865 0.71 -0.2
911,387 - -0.7
911,754 + +0.3
911,784 + -0.4
911,828 + MPMX26_00866 0.13 -0.0
911,828 + MPMX26_00866 0.13 +0.1
911,835 + MPMX26_00866 0.14 -0.2
911,868 + MPMX26_00866 0.20 +0.1
911,888 + MPMX26_00866 0.23 +0.0
911,961 + MPMX26_00866 0.34 +0.2
911,961 + MPMX26_00866 0.34 -0.2
911,971 + MPMX26_00866 0.36 -0.2
912,021 + MPMX26_00866 0.43 +0.1
912,215 + MPMX26_00866 0.73 +0.2
912,225 + MPMX26_00866 0.75 +0.1
912,232 + MPMX26_00866 0.76 -0.3
912,263 + MPMX26_00866 0.81 +0.3
912,273 + MPMX26_00866 0.82 +0.4
912,273 + MPMX26_00866 0.82 +0.0
912,273 + MPMX26_00866 0.82 -0.4
912,283 + MPMX26_00866 0.84 +0.1
912,283 + MPMX26_00866 0.84 +0.3
912,288 + MPMX26_00866 0.85 -0.0
912,288 + MPMX26_00866 0.85 +0.3
912,295 + MPMX26_00866 0.86 +0.1

Or see this region's nucleotide sequence