Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00388

Experiment: Ammonium Nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00387 and MPMX26_00388 overlap by 13 nucleotidesMPMX26_00388 and MPMX26_00389 overlap by 8 nucleotidesMPMX26_00389 and MPMX26_00390 overlap by 4 nucleotides MPMX26_00387: MPMX26_00387 - hypothetical protein, at 416,337 to 417,323 _00387 MPMX26_00388: MPMX26_00388 - hypothetical protein, at 417,311 to 418,090 _00388 MPMX26_00389: MPMX26_00389 - Ubiquinone biosynthesis O-methyltransferase, mitochondrial, at 418,083 to 418,679 _00389 MPMX26_00390: MPMX26_00390 - hypothetical protein, at 418,676 to 419,347 _00390 Position (kb) 417 418 419Strain fitness (log2 ratio) -1 0 1 2at 416.437 kb on + strand, within MPMX26_00387at 416.587 kb on + strand, within MPMX26_00387at 416.594 kb on + strand, within MPMX26_00387at 416.618 kb on + strand, within MPMX26_00387at 416.618 kb on + strand, within MPMX26_00387at 416.729 kb on + strand, within MPMX26_00387at 416.865 kb on + strand, within MPMX26_00387at 416.868 kb on - strand, within MPMX26_00387at 416.976 kb on + strand, within MPMX26_00387at 417.218 kb on + strand, within MPMX26_00387at 417.511 kb on + strand, within MPMX26_00388at 417.693 kb on + strand, within MPMX26_00388at 417.761 kb on + strand, within MPMX26_00388at 417.863 kb on + strand, within MPMX26_00388at 417.863 kb on + strand, within MPMX26_00388at 417.863 kb on + strand, within MPMX26_00388at 417.863 kb on + strand, within MPMX26_00388at 417.891 kb on + strand, within MPMX26_00388at 417.898 kb on + strand, within MPMX26_00388at 417.898 kb on + strand, within MPMX26_00388at 418.094 kb on + strandat 418.136 kb on + strandat 418.136 kb on + strandat 418.146 kb on - strand, within MPMX26_00389at 418.153 kb on + strand, within MPMX26_00389at 418.161 kb on - strand, within MPMX26_00389at 418.298 kb on + strand, within MPMX26_00389at 418.477 kb on + strand, within MPMX26_00389at 418.577 kb on + strand, within MPMX26_00389at 418.599 kb on + strand, within MPMX26_00389at 418.628 kb on + strandat 418.628 kb on + strandat 418.659 kb on + strandat 418.659 kb on + strandat 418.793 kb on + strand, within MPMX26_00390at 418.798 kb on + strand, within MPMX26_00390at 418.832 kb on - strand, within MPMX26_00390at 418.841 kb on + strand, within MPMX26_00390at 418.841 kb on + strand, within MPMX26_00390at 418.872 kb on + strand, within MPMX26_00390at 418.872 kb on + strand, within MPMX26_00390at 418.872 kb on + strand, within MPMX26_00390at 419.003 kb on + strand, within MPMX26_00390

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium Nitrate (N)
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416,437 + MPMX26_00387 0.10 +0.9
416,587 + MPMX26_00387 0.25 +0.1
416,594 + MPMX26_00387 0.26 +0.9
416,618 + MPMX26_00387 0.28 +0.3
416,618 + MPMX26_00387 0.28 +0.7
416,729 + MPMX26_00387 0.40 +0.5
416,865 + MPMX26_00387 0.53 +1.4
416,868 - MPMX26_00387 0.54 +0.4
416,976 + MPMX26_00387 0.65 +0.4
417,218 + MPMX26_00387 0.89 -0.1
417,511 + MPMX26_00388 0.26 +1.3
417,693 + MPMX26_00388 0.49 -0.3
417,761 + MPMX26_00388 0.58 +0.8
417,863 + MPMX26_00388 0.71 +0.2
417,863 + MPMX26_00388 0.71 +0.0
417,863 + MPMX26_00388 0.71 +0.7
417,863 + MPMX26_00388 0.71 +0.1
417,891 + MPMX26_00388 0.74 -0.0
417,898 + MPMX26_00388 0.75 +2.0
417,898 + MPMX26_00388 0.75 +0.3
418,094 + -0.5
418,136 + +0.4
418,136 + -0.9
418,146 - MPMX26_00389 0.11 -0.9
418,153 + MPMX26_00389 0.12 +0.7
418,161 - MPMX26_00389 0.13 +0.7
418,298 + MPMX26_00389 0.36 -0.6
418,477 + MPMX26_00389 0.66 +0.3
418,577 + MPMX26_00389 0.83 -0.1
418,599 + MPMX26_00389 0.86 -0.9
418,628 + -1.0
418,628 + +1.4
418,659 + -0.3
418,659 + +0.5
418,793 + MPMX26_00390 0.17 +1.0
418,798 + MPMX26_00390 0.18 +0.5
418,832 - MPMX26_00390 0.23 -0.4
418,841 + MPMX26_00390 0.25 +0.7
418,841 + MPMX26_00390 0.25 +1.4
418,872 + MPMX26_00390 0.29 -0.1
418,872 + MPMX26_00390 0.29 +1.0
418,872 + MPMX26_00390 0.29 -1.3
419,003 + MPMX26_00390 0.49 +0.3

Or see this region's nucleotide sequence